Array 1 1201311-1203838 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016804.1 Halodesulfurarchaeum formicicum strain HSR6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1201311 30 100.0 35 .............................. GAACGCCTCGACATGGAGATGGCTGACCACATTGA 1201376 30 100.0 36 .............................. GCGTTCCTCGATGCGGACGCACGCGCGAGCGAGGAC 1201442 30 100.0 37 .............................. AGGCCCAACTGACCGAGGAGTTCCAACAGGAATTGCA 1201509 30 100.0 34 .............................. GTCGCCTGTGAGCGGTTCCTGGCGGCGCTGCGCG 1201573 30 100.0 35 .............................. TATTGTCGGACTGTCGGACAGCGCAGTATTGCCGG 1201638 30 100.0 33 .............................. ACGGTGGGGGACCGCGGCGTAGTGTACGACCCC 1201701 30 100.0 35 .............................. GCCAGGTCGGTTGCCGCGCCGTCGATGGTCAACTG 1201766 30 100.0 35 .............................. GAGGGATGCAAAGTCTGGGACATTGGTGGCTGTGC 1201831 30 100.0 35 .............................. TGGCATGGGCCCAGATAAGAGAGGTTATCTCGATA 1201896 30 100.0 37 .............................. ACGCCGGCGAGGGCTGCAAGCGTGCCGGTCGATGCCG 1201963 30 100.0 36 .............................. TCGCTCACCTCGATCATGATTAGACCTCGCCCTCGT 1202029 30 100.0 37 .............................. AAACCCAGCGACTTGCAGGACTGGCGGTTAGACCAGT 1202096 30 100.0 39 .............................. TCGCAGGTGATCAAGCACATCGAGGGAGCTTCGGTCCGC 1202165 30 100.0 36 .............................. GGATCGAGAAATTACCATTACCTGGACGAACAACGA 1202231 30 100.0 36 .............................. AGCAAGAAGCCAAGTTTGACGACATCACAACCGAAA 1202297 30 100.0 37 .............................. GCACGGGAAAACGTGAATCCGGTTATTACCTATGAGC 1202364 30 100.0 37 .............................. CTTCGACGCCCGGGCTGAAAGGTCTTGCGTAGCACAT 1202431 30 100.0 35 .............................. AAAGGCGACCGCGAGAACCCTCCAGAAGCCGTTGC 1202496 30 100.0 38 .............................. ACCCGAGGACCTGCTTCGCGGAGACGCGATGAAGGCCA 1202564 30 100.0 36 .............................. ACTTCCTCTGCATAGCACTCATAACAGAGTGGAGGA 1202630 30 100.0 33 .............................. TTTCCGCGCTCGAAGACGGGCCGAAGAATCCAG 1202693 30 100.0 38 .............................. AATCTCGAAATCACGGTTGCCAACCCCGAGTTCCCCGA 1202761 30 100.0 36 .............................. GAGCAAAACGGCATCGTGACCTTCGAGCTTGATCGG 1202827 30 100.0 36 .............................. GAGCAAAACGGCATCGTGACCTTCGAGCTTGATCGG 1202893 30 100.0 35 .............................. AAGATGCACCCCTGGCTCCCGGGGATCTCCGCCGA 1202958 30 100.0 35 .............................. GCTCGGACGGATGAACGATTACCTCTCGGTGATCG 1203023 30 100.0 37 .............................. AGACTCATGCAAGCGGTCGGTGCAGTCATGAAATAGA 1203090 30 100.0 36 .............................. AGCCCGGGGAGGTAAATCGAGCGGACGAAATACCCA 1203156 30 100.0 36 .............................. ACATTCGCGCCACAACATGCCTTGATCGTCTCGCTC 1203222 30 100.0 34 .............................. GCCATCTTCGTTGATCGAGTCCAATGATGCCTGT 1203286 30 100.0 36 .............................. ATCACCGAAGAAGAGTGGCAGGCGATGGAAGACCGA 1203352 30 100.0 33 .............................. CTCCACGGGAGCAGGTTGTCGATGATCGGAATG 1203415 30 100.0 36 .............................. CTCCAGAAAGCGTAAATGCATCTGTTAATGGATCTA 1203481 30 100.0 36 .............................. ACTCGGTAAAGCCCTCGCGTTCGACAGCGGCCCGTG 1203547 30 100.0 36 .............................. GTTAATATCCGTGGGGCCAATGATGACATGAATACG 1203613 30 100.0 35 .............................. TGCGGAAAAGACACCGGACAGGTAAACAATCACAT 1203678 30 100.0 35 .............................. TGCGGAAAAGACACCGGACAGGTAAACAATCACAT 1203743 30 100.0 36 .............................. ACCAAGCGCCAGGCCGTCGATGAGCACGGCGCGCCG 1203809 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== ======================================= ================== 39 30 99.9 36 GTTTCAGACGAACCTGTGAGGGATTGAAGC # Left flank : AGCACCCCCGACTGAATAGGAAGGTGAGTTTCAAGACGCTCGTTCAGACCGATGTGTACAGTTTGAAAAAGCACGTGCTGACCGGCGAACCATATCACGCAACAGAACGGTGGTGGTAAGATGCACGTGATCGTCGTCTACGATGTCCCCGCAGACCGAACACACGTCTATCGAAAGCTGCTTCGCCGCCGGCTCGAGCACCTCCAGCAATCGGTATTCTTCGGCGAACTCACAGAGGGGCAGGTCACGGAGATGAAAAACGAAATCAAGAACAAGCTCACACCGGATGACGCGATAGTGGTGTTCGAATCCACGAACCCCGCACATTTTGATTATTCCCTCTTCGGCTCGAGTGACGAACCCGGCAGTCGATTCACCTAATATCCGTTGGTGTAAAACGTTTCCATCGACCCCCTGGGGAAGAGCGGGAATTGCGGGTCGATGGAAATATTTTCCTACATAGCCCAAATACACGCTCTATACGGGCCATATCCGGGTGG # Right flank : GTCCGGCTCTGGGCACTATTTAGATAAGCCGATTTCAGAACCAAGCGAGAGCTTGGAGCCAGTTTTCCGCGGACCCAGCTGAAGATCGGGAAATGTATTGTAGAATTGGTTCGTTCGACGTTGTATTTTTTTAAAGACTCATTCAACTGGGTTTCTCTCGCCAAAACTTTCGTGCCAAAAGTGCATGCCGAGCTCGTGCAACCGGGCTTGTAGCCAGGGCGCGCCATCCACGAGGAAATCAGCATTTTCGATTTCGTGTTTCTCGTTCAACTCGCGGAGAAACATCTTGGTAAGAGCTAGATTTCTGGTCGAATAGAAAGACAGGGCCGAGGAAATCGTCGGCAAACACGTCAACAGTGCGTTGGAAACTGCCAGCCTTGACGTGCAGCGAGATACCCTGAATCGCCTCAACAAGCACCAGTCGATGGTCTACCAGATTGTCTTCGAACAGGGGCCGCTGAACCCCGGCAGCATCTTTGAGCAGTACGCCGATCGAATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCTGTGAGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.80,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //