Array 1 70490-72335 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVEZ01000004.1 Faecalibacterium prausnitzii strain AM42-11AC AM42-11AC.Scaf4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================================================================================================================================== ================== 70490 28 100.0 33 ............................ TGTCCACGGTGTCCATGGTGGCCTGTTGCTCGG 70551 28 100.0 33 ............................ CATCATTGGAAGATGAACTACATCAGTGACCCC 70612 28 100.0 33 ............................ TATCTGCGTCAAAACCTTCTTTTCTCAGAGGCA 70673 28 96.4 33 .................A.......... TCGCTTGAAGTTGTTCCAGAGAATTCTGTTTGG 70734 28 100.0 33 ............................ TAGCTGTTCGGCACATTGCCGTTTAGTGCAGAT 70795 28 100.0 33 ............................ CAGCAAGACCGCACTATCACATGATACTGTACG 70856 28 100.0 33 ............................ CAACTCCCGGGAGAGAAATGCCGGAAAACCTAG 70917 28 89.3 33 .......T......T............T GGACGATGCCTACTACGAGAAGCTGGCTATGGA 70978 28 100.0 33 ............................ TGACCGCTCAGGAGCTGGAGACCCGGCAGGCTG 71039 28 96.4 33 ..............T............. CTGCGGTTCGTTCTGCACGATGAGCGTTCGCGC 71100 28 100.0 33 ............................ TGATGATTCCACCTATCCCTTCATCAGCTACCT 71161 28 96.4 33 ............T............... TGTGCGGCTCTACCAGCCGGACAAACTCGCCGT 71222 28 89.3 33 ............TG.........A.... CACTCTGCAACTGCTCATACGCCTGCTGTTCGG 71283 28 85.7 33 ........T...TGT............. TACCATGTTGTCCCACACGAAGGGCTGATAAAA 71344 28 96.4 203 ........................C... ATGGAATGATGGGCACAATGCAGGAGTGTTCAAGCTTAACCTGAGGATGCAGAAGCAAATTACAAGAAAGAAGGTGAAACAATGGAACATGAATATGAAGCACTATTCAGAGCGATTTTGGAGCTTATCGACAAATGCGACACGATTGAAGAATTGCGTGAGAGCGTGAAGCGTATCATGGGCGAGGGTTAAGCTGAGATGCA A [71366] 71576 28 96.4 33 T........................... TGATGCGCAAACTGTTGATTTCTTCCTTCAGGT 71637 28 92.9 33 ............A.T............. TCCTTTCCGATGTGATATCATCAAGGTGATGGG 71698 28 92.9 33 ............T.T............. TGCCCCGACCGACCTGCGCGGGCGGCCCATCAA 71759 28 89.3 33 ............TG..........C... CTACCCCAAAATCATCCGCAAGAAGGGCCTGAC 71820 28 92.9 33 ............TG.............. CAGCCCAAGCCCCGGCACCGTCTGCCTGTATGC 71881 28 92.9 33 ............T.T............. TAACTTCCATGATTTCATTCCTTTCATTCCTGA 71942 28 85.7 33 .C..........TGT............. TGAACCAGAACACCATGAACAACCAGGTTGGCA 72003 28 92.9 33 ............TG.............. CTACTGCCATTTCCCGTCCAACCCGGAAGCGGG 72064 28 92.9 33 ............TG.............. TGCCATCGACCAGTCCCCCAAAAAGTACATCAA 72125 28 85.7 33 ...........TTGT............. CTATGTGGTGCTGTACCAGATGCTCTGCCTTAT 72186 28 100.0 33 ............................ TTTCACGGATTTGATGACCCACCGATAGCTGCC 72247 28 96.4 33 ............T............... CAGTTCAGCAGTCTTGAACCTATCGCCCAGTTC 72308 28 85.7 0 .......................TCCA. | ========== ====== ====== ====== ============================ =========================================================================================================================================================================================================== ================== 28 28 94.5 39 CTTTTCCCCGCCCACGCGGGGGTGATCC # Left flank : GCCGCCTCAGATGCCATTGTGGAATACGGCGCTCTCCGTGTGCGGGATGGTCAGCCTGCCGAAGAATTTTCGGCCCTTGTCCGGGGCACAGAACCTCTGCCGGATGTGGTGGCAAAGCTCACCGGCATCACGCCGGAGGAGCGGAGCGGCGGTATGGAGCCGCTGGCCGCGCTGGAGGCGTTCCTCGCATTCGTGGGCAAAGACACGCTGGTGGGCTATCACCTGAAATTTGACCTCGATTTCTTGCGTGCGGCCTGCATTCGGAATGACAGACCCCTGCTTACCAACCGCAGCATCGATGTTTTGCCCCTTGCCCGCCGTAAGGTGTCGGGGGTGATGAACTATAAGCTGCTCACGCTGGCCCGGCATTTTGAGGTTGCCCAGCAGGAGACCCATCGCGCCCTGCCCGACTGCCGCCTGATCCAGCAGGTCTATGCAAAACTGAATGAAACGGGATCGGCCCGCTGATAAAAATGCCGCTTCTATGGGATCTTTTTAGT # Right flank : CATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGTTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCTGCCCACGAGGCCGGTGCCATTGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATATGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCACCCGTCG # Questionable array : NO Score: 4.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.59, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //