Array 1 1589021-1587579 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_010080.1 Lactobacillus helveticus DPC 4571, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
   1589020	    32	 100.0	    35	................................	ATTTATAACTTGATATAACCTAACTGTACTTATAT  	
   1588953	    32	 100.0	    35	................................	TGATCGTGATTGTAGCAGTATCGCAGGGCGTATCC  	
   1588886	    32	 100.0	    36	................................	ATTGACAAGACTGCAACAGTCGCTTTAACAATTGAC 	
   1588818	    32	 100.0	    37	................................	ACTTGTACTATATACCAAAACATGCAAACGGGTGAAC	
   1588749	    32	 100.0	    35	................................	ACTCCATACAGAGTACGTACTTAATTCGTACACTG  	
   1588682	    32	 100.0	    35	................................	TCGCATAGCAAGAACTAAGCAATAGCCTTATAAGC  	
   1588615	    32	 100.0	    34	................................	TTTTAACTAGCTTACATTTTTATACTATCATATT   	
   1588549	    32	 100.0	    34	................................	AGTTGATCGGGGCGCGAATCAAAACAGCCTTAAA   	
   1588483	    32	 100.0	    37	................................	TTATTTATGTCTGCTGTTAATATTGTACACAAGGGCA	
   1588414	    32	 100.0	    35	................................	AAGATCACGATGGTGTTTACAGCTACATATAGCAA  	
   1588347	    32	 100.0	    35	................................	TTTTGTTATCCTTGTTCCTTGTTCGATTCAAAAAA  	
   1588280	    32	 100.0	    35	................................	AAAACTAGGTGACGACAAATCAACCATTCGGCTAC  	
   1588213	    32	 100.0	    34	................................	TGCAGAGATTCGCAGGATACAGCAGAAAAAAGAT   	
   1588147	    32	 100.0	    35	................................	TACTATGACCAAATCAAGCACTACCAGCGCTTGCT  	
   1588080	    32	 100.0	    35	................................	TTAATGGCTACGCTAACGGCACGACCAATCTAAGA  	
   1588013	    32	 100.0	    36	................................	TTTATCAGGACTAGTGTCAATATTATTCAAAACAAT 	
   1587945	    32	 100.0	    35	................................	TTACAAGATTAAAGGTACTTTAGCTAAAGATGACA  	
   1587878	    32	 100.0	    36	................................	TATGTAATATATGGTGATGGTCACCCAATCTATGTG 	
   1587810	    32	 100.0	    35	................................	AATATACAGCCTATGGACGCTTAAATGGCTTTGCA  	
   1587743	    32	 100.0	    34	................................	TAATTGGGAAGTAGTGAACGGTATTGACCCTAGA   	
   1587677	    32	 100.0	    35	................................	AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG  	
   1587610	    32	 100.0	     0	................................	|                                    	
==========	======	======	======	================================	=====================================	==================
        22	    32	 100.0	    35	GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	                                     	       

# Left flank :   GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG
# Right flank :  TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [10,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.50,-3.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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