Array 1 1052346-1054690 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082988.1 Klebsiella pneumoniae strain 7008.20 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1052346 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 1052407 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 1052468 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 1052529 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 1052591 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 1052652 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 1052713 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 1052774 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 1052835 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 1052896 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 1052957 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 1053018 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 1053079 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 1053140 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 1053201 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 1053262 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 1053323 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 1053384 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 1053445 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 1053506 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1053567 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 1053628 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1053689 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1053750 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1053811 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1053872 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 1053933 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1053994 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1054055 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1054116 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1054177 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1054238 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1054299 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1054360 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1054421 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1054482 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1054543 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1054604 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1054662 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 39 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //