Array 1 187935-184007 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIET01000002.1 Klebsiella pneumoniae isolate ID_50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187934 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187875 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187814 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187753 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187692 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187631 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187570 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187509 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187448 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187387 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 187326 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 187265 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 187204 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 187143 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 187082 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 187021 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 186960 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 186899 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 186838 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 186777 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 186716 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186655 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186594 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186533 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186472 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 186411 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186350 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186289 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186228 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186167 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186106 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186045 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 185984 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 185923 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 185862 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 185801 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185740 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185679 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185618 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185557 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185496 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185435 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185374 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185313 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185252 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185191 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185130 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185069 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185008 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 184947 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 184886 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184825 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184764 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184703 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184642 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184581 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184520 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184459 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184398 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184337 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184276 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184215 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184154 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184093 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184035 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //