Array 1 34349-33914 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVU01000005.1 Hungatella hathewayi strain OM02-1 OM02-1.Scaf5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 34348 33 97.0 34 ......................C.......... TCCTGCTGCTTCTGGCCTCCACAGGGGAGACGCT 34281 33 97.0 34 ......................C.......... CGCCGGAGAAAGAAGGAAGTATATGAAAAAATAT 34214 33 100.0 34 ................................. TCATTATGTCCTGTTCCGTCAATCCCAATACATA 34147 33 100.0 34 ................................. TCCAATCTTCTCAGCCCATGTATACGTCTTAGTC 34080 33 97.0 34 ..................A.............. CCCAGCTGATGCCGTATTCGTAAAGTTACCAGCT 34013 33 93.9 34 ..................T....A......... CTCTGAAGGAAGTGCAAATCATACACTTTCTCTA 33946 33 69.7 0 ...C.T......A.T..CCA.A..TC....... | ========== ====== ====== ====== ================================= ================================== ================== 7 33 93.5 34 GTCACCTTCTGTGAGGAAGGTGTGGATTGAAAT # Left flank : ACGATAAGGAGTACAGAAAGGCGTTGAACATCTGCGGATCAAAGTCCGGGCGCGACTGCGACAAGGTGAAGGAGGCAGGCCTGACCCCCTGTTTTATTGACGGTACCACAGCATTTGAGGAAGCGAATATGATTTTTGTCCTGCGGAAACTGTACTCCGATCCCATGCCAGCTGAAAATTTCCTGGATAAGGAAATTGATCAGAAATGTTATCCGAATAAAGACTATCATACGATGTATGTGTCGGAGATTGTGAAAGTGCTTGTGGCAGATTGCCAGGCTGACTAATTGTGAAGGGATTTCGTCTTAGATAAAAGTCAGATAAGAGGGTAGTAAGCTGGTGCGAATCTGAAGTAAGCATGAAAATACCGGGGGATTCGCACCGGGAAAATGAGAGAATAGGTAGAAGAAGAAAGATCGCTATTGATTTTGTTGGAGAATATTGTACAATATAGTTAATGATAGGGGGAGGGAGTGGGGGAGGTGTTGTGGAGAATTGCG # Right flank : AACCATATCCTCCCTTCCAACCTCTCATCACAACAAAAAGAACCTTCAGAAAGCAAATGCTTCTAAAGGTTCTCTTTTTCTGATAACAATATCCTCTCTAATCCCCAAGATAATAAACCGCCGTAAAATACCCCTTACTATTATAATAAAGCGCATTCCCAAGTACGCTGCTGTCAGCCAGCGCCTCCGTCTCCCCGCCGCGCTCCGATGCACCAGCACAGATCTCAGTCTGAGTTTTCGATGCTTCTGCCAGGCTGGTATAAGCGCCTGTCACGGCTCCTTTCAGAATGTAAATGTCCCCTTCATATACCGTCTTCATCACAGTGTCTGCGCTGGTCTGCCACAAAGTATAGGTTCCATTTTCCAGATCTGCGATGACTCCTGTTTCACTGCCTTGTGAGGAAGGCGTTGTTCCCTTGTCATACATCAGATAGCCGTATGAATTCGAGTCCCCTGCGTTGGGATCCAGGGAAATTAGTTGGCTTTCGCCGGTCAGCGCG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:0, 3:3, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTTCTGTGAGGAAGGTGTGGATTGAAAT # Alternate repeat : GTCACCTTCTGTGAGGAAGGTGCGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 13091-13779 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVU01000006.1 Hungatella hathewayi strain OM02-1 OM02-1.Scaf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 13091 32 100.0 34 ................................ TCCCGGCCTGATCCCGGACCGGGGTGGGACTTTT 13157 32 100.0 35 ................................ GAAAAACTCATATGTCTTTTCAGTCTCTCCCTCAT 13224 32 100.0 33 ................................ TCTTATATACAGGAACGTCCCATTAACATGACA 13289 32 100.0 33 ................................ TTTATATTGGCCAATAACAAAACTCGTCATATT 13354 32 100.0 34 ................................ TTTGAGACGATGTTCCATATCTGCTATGTAGAGA 13420 32 96.9 34 .........................C...... ATCGGGCTGCTCAGCGTCTTTTTACCCTGGATAA 13486 32 100.0 33 ................................ GCCACAATCTGGCTGATCTCCAAAAGATTTTTC 13551 32 100.0 34 ................................ TTACAACCATCTGGCGAGATAACGGTAATACGTT 13617 32 100.0 34 ................................ GGCGGATATTTTATCATCTGATATAGGATAATCC 13683 32 100.0 33 ................................ TCTGGAACCAGTATATGAACTGTTGTTTCCACT 13748 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 11 32 99.7 34 GTCACCACTGATGCAGTGGTGTGGATTGAAAT # Left flank : AGAAGGATGAGCGATTTAACAGAGCGATATGGGGGGTATGTGGATTTTGCGGAAATCGAAGCATTGCAGTACCTCTCCGAAATGGTGCAGGAAGTATCGTCTGGAGTATATTTAAATAATATAGACAGATATTCAACCAGAAGAAATATGAAAATGGATTTAAGCGGATTAATGGGAGCTATGACGTTCCAAGGAGAGTTATCAGTATTCACTCCATGGCTGAATGCGGCCTCTGTCTTACATATAGGCAGAAATGTTACATTTGGATGCGGAAAAATTGATGTGGTGTTTGGAAATATAGAATAATCTAAAAAAACTAATAAATTATCGGGTGCGAACGTCAAGTGATCGTGAAAATGCCTGGAGGTTCGCACCTGAAAATGAAGAAATCGGAGATGAAATTTAATTGTTTTATTAGAAATAAAGTGTTAAAATAGAAATATAGACAATTTTTGGTTAGTTTGTGATAGATTGTGTTGCTGAAATTGTGCAGATTTGCC # Right flank : TTCTCATTGTTGACAATTTGAATTACCTTCCCTCGAGGCCACCACTGATTCAATAGCACAAATATATATACTCTTAAATAAGACAGTAGATATAGTCATATATTCTGGCTGTCGTATCAGTGTAAAAAAGGAGATGTTTCATGTTCCTTGCCCACATAAGCCAAGATCAAACTCGAGAGCAAACGATCGCTGCCCACTGTCATGGTACAGCACATCTTGCCGGTGATTTTGCATCTTCTTTCAAGTGTAAGGAATGGGGGTACGGCTGTGGCCTGATCCATGATATCGGAAAATATTCGGAAAAGTTTCAAGAACGTCTTCATGGAGGAAGCATCACGGACCATGCGACGGCAGGCGCCCAGGAATTATATAAAAGAAAAAATATCTATGCAGCCTACTGCATTTCCGGCCATCATTCGGGATTGCTGAATGGCGGGACTCGTGCCGATTGCGCAGGAGAAGCCACTTTTATGGGAAGGATGAAAAAGGGGCTGGAAGAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACTGATGCAGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 16447-16676 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVU01000068.1 Hungatella hathewayi strain OM02-1 OM02-1.Scaf68, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 16447 32 100.0 35 ................................ TGAATCTGAACTTCTGTTTCCAAAAGCTGGGATTC 16514 32 100.0 34 ................................ AGCAGATCACGGAAAACAGAAGCGATAAGTCCCC 16580 32 100.0 33 ................................ ACTGATGGTCGTTGCTTGTGCTGTGGACGTGGT 16645 32 75.0 0 ..............T..AT..A..AAA....T | ========== ====== ====== ====== ================================ =================================== ================== 4 32 93.8 34 GTCGCACTCTATTGAGTGCGTGAGTTGAAATC # Left flank : GGTAAATCAAGCGATACCATGGGAATGAAATATGTGGTTGATGATGCCGTCTATGTATCATATGGATCTATTTCAGTAAATCAAGCAAACGAAAATGGATTTACAGAAGCGGATGCAGAAACGCTTAAAGAGGCAATTTTATATATGTTTGCTAATGATGCGTCAGCTGCACGCCCATCCGGAAGTATGGAAGTAGTGAACCTTGTATGGTGGAAACACAATTGCCCAGCGGGGAACCTTCCATCAGCGAAAGTTCACCGTTCATTGTCTGTAAAAAGAGAAGGAAATGATTATAAAATAGAAGTAAAAGAATTGGAAAATATCACTTGTGAAATCCTGGAAGGTAGATCTTAGTGCGAACCTTAAGTGTACATAAAAGTACAGGGATATTCGCACCAGATTTTCACATTTTTAGTAAAAAATAACTTCTTATGATATGATAAGTGCATGTGAATAGCAGTATTTTGTATGTATACATGGAACATCATCAAAATATTGCT # Right flank : TGAAATAAGCTCTCGATTGAGGGCTTTTTTTTAATACATTTTAGAATAAAGTTTTATAAAGAAATATTAGAATAACCTATCATTTAAACATAATAAAAGTAAAACAACTTATTTTAAGGAGTAAAAAATGATTATAGATAATCCAAGCTTCTACGAGCTAGATGATAAATTAAAAACAGGAAAAATAAATTTAGATATTGTAAAGGGTAATGATAATATAACCATACCTATACAAATATACAATGATACCCCATATACAGTAATTCAAATCGATAATATAAAGGGACAGGAAATTTTTATCAGTAAATATTTAAGGAATATGTATTGGGGAGAGAATATTACATATGTAGATACGACTTCCCCACTTAATTTTTATAGGGGATATGAATTATATGGATTGACCCATCAAAAAATAATAGAAATAGCTACGGATGATTTCATGGATACCTGTATTTTGGTTAAAAAAGAAATCCTAAAATCTGATTTAGCCTTTTTGGAAA # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATTGAGTGCGTGAGTTGAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //