Array 1 61425-61916 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHXW01000011.1 Fusobacterium perfoetens ATCC 29250 T364DRAFT_scaffold00009.9_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 61425 30 100.0 35 .............................. TTTAATCATATCTGATACCCCTTTCTTTATTTTCT 61490 30 100.0 36 .............................. TTTTCTAAAAATATGTATCTCATATAAATACACTCA 61556 30 96.7 36 .............A................ AAACATTAATCTATCTAAAATGCTTTTTCTCTCTTC 61622 30 100.0 36 .............................. TATTATATATTTTGTGTACATAAAAATTTATTTTCT 61688 30 100.0 36 .............................. TAAGATTAAAAGCCATAGCAACAGGCATATTCTCTC 61754 30 100.0 37 .............................. AATCTTAATTTATCCCCTACTTTTAAATCATTTACAT 61821 30 100.0 36 .............................. TTATGATTTTTATATCAATATTATCTGTATTTATTG 61887 30 83.3 0 ...................AA......TTA | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 97.5 36 GACTAAAACCAAGTAAATTGGTATTTAAAC # Left flank : AATTTATATCATGGAATGAATTTGTTGAGAATAGTTTTTAAAGAACAATATAATTCAAAATATTTTTATTATATTTTAATAACTAATAAATATAAAAAGATATTTGAAAAATTATGTAATAAAGCAGTAAGTCAAGCTAGTATAAACCAAACTGAATTAGGAAAAATTAAGGTAAAATTTCCTATTTTAGAAGAACAAAGAAAAATAGCAAATTTCCTATCATCTATTGATGAAAAAATAGAGAAAATTGAAAATGAACTTGAAAATTTAAAAGAATTTAAAAAAGGATTATTACAACAGATGTTTGTATAAATTATATAATAAATTTGTCGGTATAAGATAAAGTAAAAATATCTTATTACCGACAATGGTAAAATACCTTATATTTCAATAAAAAAGAAATAATAAAGAATAATTTTATAAAAAATATTTAAAATTTATAGAATTCGACAAAAATACATTATAAATCTTTCTAAAATAATAATATTTTAAAGTTATAA # Right flank : AAAAACTAGTTATCTAAATAACTAGTTTTTTTCTTGTTTATGTTATAAAAATAAGCTAGAATAATATAGAGGTGATAAAATGGGAAAACCAAATAGAAGTTCAATAATAAAAATTATAATTTCTAATTATGATAACAAAGGAATAAAAGAAGTAAAAGTAAGATACAATAAACAAGCTCAATTAGATACTTTTTTAATTAAAAGTGAATTGAAAGATGGAAAGTTTATTTTATATTCAATAGTAGATAAAGCAAGAGAAAAATATAGATATAGTTTTGAAATAGATAAAACTAATATTAATAAAAATGAAATACTAATTATAAAAAAAGATATATATTCTAATAAAGAAGATAAAGTTATAAGAAAATATATTCTTTCTTTTGAAGTATCTGAAAAAAATGATAGAACAATAGTAACCAAAATAAAAGATTGTTTAGAAACTCAAAAGAAAGAAAAATTTGAAAGAGAAAATACAAGAAGATTAATCTCTGAAACAGAAA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACTAAAACCAAGTAAATTGGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 162972-164623 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK211416.1 Fusobacterium perfoetens ATCC 29250 T364DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 162972 37 100.0 34 ..................................... TATTTTTGAATTTATTATCTCATCTATTGTTTTA 163043 37 100.0 37 ..................................... TATAATCTTCTTCTAATTTTTTAAAAGTAGTTTTTCC 163117 37 100.0 36 ..................................... TTTGAAGATTTTTCATATTCTCCTGAATTGTAATTT 163190 37 100.0 36 ..................................... ACCGAATAGTATATTACAAATACACCTATCATAATC 163263 37 100.0 35 ..................................... TTTTTTAATTCCATATATTGTCCTCCTATGCTTTT 163335 37 100.0 34 ..................................... TCATTATCTAAGGCACTGTAAAGGCTGTTATGGT 163406 37 100.0 35 ..................................... CTATTAATTCAAGATTATTTGTTAAAACCAACATA 163478 37 100.0 39 ..................................... TTTAAAATAAGCATCTCCATTTTTATTATAATAAATTTT 163554 37 100.0 35 ..................................... CTATTTTAGTCTTTTCTTTTTTATCTTTCAAAGTT 163626 37 100.0 40 ..................................... CAATGGCTTTTTCTACGTTGTCCCACTCTTTGCAAGTGCA 163703 37 100.0 38 ..................................... ATGTCCTAAAACTTGTCTATTATTTTCTATTTGATTTA 163778 37 100.0 37 ..................................... CTGTAAAGGCTGTTATGGTCTCTACCTCTTAAGCAAG 163852 37 100.0 35 ..................................... TATATTCTTGAAAGTATGTTCCGTCGTCATAAACT 163924 37 100.0 36 ..................................... TATCATAAAAAGATACTACTTTGTAAAACTCCTTTT 163997 37 100.0 37 ..................................... TTTTAAAAGCTAGTTCTTCATTTTTCATTTTTTCAAA 164071 37 100.0 37 ..................................... TTCTTCTTTTACTTCTTCTTTTACTTCTTCAACCTTT 164145 37 100.0 34 ..................................... TTATTATTCACTTCCTTTTATTAATAAATTTAAT 164216 37 100.0 38 ..................................... TCTTTTGATACTATACCTATATAAAGACTATTGTTAAG 164291 37 100.0 37 ..................................... ACATCATTAATCTTGACATCTCATCAACGTCACATTT 164365 37 100.0 36 ..................................... ATGTAATAGAAAAAATAAATTGTTGTTGTGGTATTT 164438 37 97.3 38 ........................T............ AATAGTGATTATTTTTCTATGGTTATAGTAAAATTCAT 164513 37 97.3 37 A.................................... AAATAAGTCTAATACCCAATCAGGAATATAATCGGCG 164587 37 75.7 0 A.....AA..G......C............ACA...A | ========== ====== ====== ====== ===================================== ======================================== ================== 23 37 98.7 36 GTAAAATTTATATTCCAGTAAAAACAAGGATTGAAAC # Left flank : TGGAAATGTAAAGAAAAATATAATAATGAAAGAAAAAACAGAAAGTGTAGCTAATGATATAAGAGGATTAAAGGACCATATTTTAATTTGTGAAAAAATATTTAAACAAAATAAGTTGCTACAAGAATTTTGTAGTTATTATATGATTAATTATGAACAAAATGAAAATTAAAATAAAAAGTAATTTTTTCTTTTAAATTGTAATTTTAAAATAGTATAATTTTTTATTAAGAAATTTATAAAAAATAAGAGATTAAAAATATAAAAAGATGTGGTATAATTGATTAAAAGATAATTTACGGAAAAATGATTTTTGTAAAAAAATTAATATAACTATATGAAATTACAAAAGAAAAATTTACGAAGAACCTTGGAAATTAAATAAAAAAAGAGAAAAGTAAAAGAAAAAAAGAGGAAAAAATGCCGTTTTATAGATAAGTTTTACGACAAAATTTTATTTATAAAACGGCTAATTATAAAAAATTAAAATAAAAAATGTT # Right flank : ATTTATAATACTATATTTAAAAAAGTAATTAATAAAATAATTTTGTAATTATAAAAAGGTAAAATAAAAGAAAAATTTTACTAGGAGGAAAAATGAAAAGATGTTTTATATTTTTTTCTCATCAATTAACAGAAAAACAAACTCAAGAGATAAGAAATGATTTGAAATGTGATGAGATAATATATTTACCAAAAGATTTACAATATAAATGGAGTAATGTCGAAGATGATTCTTTTGATAAGATAAGTAATTTCCTAAAAGAAAAATCTCAAAATGATGACTATGCTTTAATTCAAGGAGAGTGGGGTTTAACATATAAAATGATAAATTTTGCAAAAGAGATAGGAGTAAATCCTATTTATGCAAAAACTAAAAGAGAGGCTATTGAAGAAAAAGATGGAGAAAAAATAAAAAAGATTTCCTATTTTGAGCATATAAAATTTGAAAAATATTAAACTATAAAAAATCCGAGAGTAAAATCTCGGATTTTTAATATATAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAAATTTATATTCCAGTAAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-91.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 168335-170121 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK211416.1 Fusobacterium perfoetens ATCC 29250 T364DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 168335 30 100.0 44 .............................. TTGTAAGTGACTACATATTTATATCCTTTTTTCTTTTGTAAAAT 168409 30 100.0 45 .............................. AATTTTTCTTTTTCTAGGTCATACACTTTTATTTTATAGTAAAAA 168484 30 96.7 42 ............A................. TTCTTTTAGTTCCTCTGCTTCTGTAAGGGTAATACGTAAAAA 168556 30 96.7 42 ............A................. CATTTCTTTTCCACATATTGGGCATTTCATATTATATAAAAT 168628 30 90.0 45 ..........T.A....C............ ACTGGTGCCACAGTAGGCATTAATCTACATACAGAACTGTAAAAA 168703 30 90.0 44 ..........T.A....C............ AAACTTGGTAAAGTTGCCTTATCATGTCTTTCTTGCAATAAAAA 168777 30 90.0 44 ....C.....A.A................. TTAAATCTTAGTTCATCACCATATTGTTTATAGCTGTATAAAAA 168851 30 83.3 44 A..A......T.A................T TTTAAAAACAAAAAATTTTGTTGTATCGTTGTAAGTAGTAAAAT 168925 30 93.3 41 ...........CA................. AAGTAAGAAAAATTTAAAAATGGCACGTCTTCATGTAAAAA 168996 30 86.7 41 ...A......T.A....C............ CCTCAAGACTTTCTTTAATTCTTTCTATCTCTAGGTAAAAA 169067 30 93.3 44 ...A......A................... GTGTTGTTCTAGAGTTTGTATGATTGTACCGTCTTTAGTAAAAT 169141 30 100.0 43 .............................. TATAAATTTCTGCTTGCTCTTCTGTATAGTTTTTTCGTAAAAT 169214 30 96.7 43 .................C............ ATCTTAGAAATATCTATATTATTTCCCTCTGCAATAGTAAAAA 169287 30 90.0 42 ..........T.A....C............ TAATTTTCAGGTGTAGGATAAAAATCCTTATTAAAGTAAAAA 169359 30 80.0 43 ....C...T.A.A....C...........T CTTGATAAGTATTCATTATACTTTGGTCTATACTCTATAAAAA 169432 29 86.7 43 ....C...-.C.A................. ATTAAAATTGGTTTCCAAGTTCTGTTAGGGATAGAAGTAAAAT 169504 30 90.0 43 ..........T.A....C............ TTATAATAAGTTCTCCACTTACATTTATTATCAATAGTAAAAA 169577 30 93.3 44 ..........A.A................. TCATCAATCACAAGGTCAATTTGAGTAATGATGTATTTTAAAAA 169651 30 93.3 46 ....C.....A................... ACATATTTCTTTTCTTCATTATATTCTACTTCTGTTGCTGTAAAAA 169727 30 100.0 44 .............................. TTTTTCACCCACAATTCTATATTTATTATAATTTTCAGTAAAAA 169801 30 96.7 43 ..........A................... TCGCCATTCCACCACATTTTCAAAGGTCTTAAACATGTAAAAA 169874 30 93.3 42 ...A........A................. AAAAATTCCTCCAATTTTAATACATAATGTTTTAAGTAAAAA 169946 30 96.7 43 ...A.......................... TAATCATCCGTATAATAATAATCGGTTGTTACTTTTGTAAAAA 170019 30 93.3 42 ...A......A................... TACCATTTTATCAATTATCACTTTTTCATAGTCTTGTAAAAA 170091 30 76.7 0 ...A......T.A....C....T..A...A | A [170115] ========== ====== ====== ====== ============================== ============================================== ================== 25 30 92.3 43 TTATATTCCAGTGAAAATAAGGATTGAAAC # Left flank : AAAACGGCTAATTATAAAAAAATAAAATAAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATATTAAAATCAATATCAAATAATAATAAAGTAAAAT # Right flank : ATGTAATTAAAAAATAAAAAATGTAATTTCCATATATTAAAATATTTTCATCAAACAAATATTTTAAGGAGGAATTATGGAAGCTATATCAGGAATTTTTTTAATACTAATTCTTATTGGAATGATTTTACTAGGTAGATTAATAGGAGCTTGGATGTTTAGAATCAATGAAATTATCAATCTACAAAAAGAAACAAATAATATATTAAGAGAGATAAGATTTGATTTAAAAGAGAAAAAAGAATTAGAAAACAATTTAGAAGAAGAAAATTCAAAGTAGAACTGTAGAGATACAGTTCTATTTTTTTATGTAAAAATGTAATTAAAAAATAAAAATGGTAATTTTCATATGTTATTATAAAGAAAATTATAGAAGGGAGATTTATAAAAATATATGGAAGAAAAACTTAATTGTAAGGAAGTAATAAAATACACTATCTTAGGAGAAATATATATTTATTTTTTTATTTTAATGTTAAGTATTGCTATAACATTTTTTC # Questionable array : NO Score: 5.09 # Score Detail : 1:0, 2:0, 3:3, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTATATTCCAGTGAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA //