Array 1 1387416-1387025 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019644.2 Vitreoscilla sp. C1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1387415 28 100.0 32 ............................ ATGCGCTCTAATCGCCGTGTCTTGGCGCAATT 1387355 28 100.0 33 ............................ TCAACACTGTAAATCTTGCCAGACTCTATGTGT 1387294 28 100.0 32 ............................ GGTGATTGGAGTTGGCGCAATCGAAACCAAGG 1387234 28 100.0 33 ............................ CGACATGACACCCGCTTTAGAAATGGTTTCCGT 1387173 28 100.0 33 ............................ GCAGTCATGCCCAAAGTTTCCAATTCTTTTTGT 1387112 28 100.0 32 ............................ GTTTCGCCAGTTTTTACTTTTGCCCAGATGTT 1387052 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 7 28 99.5 33 GTTCACGGCCATACAGGCCGCTTAGAAA # Left flank : GTGAGTTCTATAAAAACGCTATTGAATTGGACATGGGCAAAGAAGGCAAGTATTGGTCCAAAGACTTTGAAATGGCAGCGCGTGCGTTTTCAGCATATTTACAGGATCGTTTGGAAGAGCAAGGGCGCAAGAATGATTATTTGGCTTATTCAACCCAAGGTGGCAATGGTCGAGTCGGTGAGCGCGCTTATCCACAAGGTGAAGAGCGCCAACGCATCAATGACGCTTTCGATGGTTTGTTTAAAGTCATTCGGGAGAAGAAGGTATTGGAAACAGCTACTGCAAACAAAGCTTTGATGGATTCATTGTTTGATTGTGTCCATTAAAATTTTATAATCGGTGGCGTAGGTGGCGTCATATCAATTTTAACCCAATATTTATGCGCTCTTTAATAAATAATTAAAATCAATCACTTATGTTTGAAGCTTGAAATTTGGGTATTTAACAGGTTTTAGGCTTCAAACCATTGTGGTATCTTGTTTTTGTAGATTATTTTTACT # Right flank : TGTCAAAATCTCACTTCATGTGGTATTGAGAAACAGTCGATGGAGATGAGTACAGATATGGGATGCTCATTCCTACGCATGATGCATCTACACTGACACGTTGCATCATGGGCGCGACTGTTTAAAAGAAAATGGGGATTCTTGGTGAATATGAGAGTGCCAGATGAAAACTCATACCTACGCAACATAAACCTCCTCTTCGCCAGCGTATGTTGGGAGCAAGAATCTATTGGGATTTTAATTAGATAGGGTGAAATGTCAATTTCAATCTTTTGGGATGAAAAGGTGATAGAAAATTATATTGCTGAGAGTCGGATATTAGGGCGTATCCTCATTTCAAGCACTACTCAATAATTGAAGCCGCCTCAGTGTAATTTATACTGAAATTTTCCCAAATTAAGCGATTAAATCAGCCAAAAAATACCATTTCATATTCATACAATAGGACTAGACCATTTTGTTTCGTTGGGTGAAATAGGGGCACGCCCTAATAAATTATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACGGCCATACAGGCCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACGGCCATACAGGCCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //