Array 1 21074-19340 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGA010000014.1 Fusobacterium sp. DD40 JD54_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 21073 30 100.0 36 .............................. ACTGGTTCTCCATTTACAAAAGCAGGACCTTTAAAC 21007 30 100.0 35 .............................. TCACAAGGAACTTTACACCAAAATTCAAGGTTTTT 20942 30 100.0 35 .............................. TATGAACTTGAATTAGTTAAAAATGTTTCAGCTGG 20877 30 100.0 36 .............................. TGCCAGAATTTAGGCTTATTGAGCACGAAAAAACGG 20811 30 100.0 36 .............................. TCTTTTCCAAACTTTTCTTCTGTTATTTTTTCAAGC 20745 30 100.0 35 .............................. TGGCAGTTAATATCTTTTAAATCCTTATTATAAAA 20680 30 100.0 36 .............................. TCACTTCCAAGCCAAACTGCACCAAATGAACCTCTT 20614 30 100.0 37 .............................. AAGGATTGATTATGACTTAGATGATGATTTGCTTGAG 20547 30 100.0 36 .............................. TCATCCGAATTAGTCATCTCATCTGTCCACCCCATC 20481 30 100.0 35 .............................. CAAAAATACAGAAGTCTTTACAATACTGATGGAAT 20416 30 100.0 35 .............................. GGGCCGTTGTTTATTATTTTATCCCCATCAATCCA 20351 30 100.0 36 .............................. TCACTTCCAAGCCAAACTGCACCAAATGAACCTCTT 20285 30 100.0 36 .............................. TTTTTTAATTCATCCTTTTTATAATTTTGGAATTTT 20219 30 100.0 36 .............................. AATCTACAAAACATATAGATTTATTGAAAGTTATTG 20153 30 100.0 36 .............................. AATTAAAGTTTATAAATAATTTCAAAACTAAACAGA 20087 30 100.0 37 .............................. AGTTATACTTCCAACGTGTTGAAGAGAGCAAAAAAAA 20020 30 100.0 36 .............................. TATTCTATTGATTTAGGGGAAAGAAAAAACCCCTCT 19954 30 100.0 35 .............................. GTGAAACGGATCACTCCTGGGGGTATTCAAAAAAA 19889 30 96.7 34 .A............................ TAAGTGAAAACGCCCCCCTTTACAAAGTGTTTAC 19825 30 100.0 35 .............................. AACTCCATAGGTATTATAACATACCTCAAAAACCT 19760 30 100.0 37 .............................. GCTATTACTCCTCTTTCTCTAATATTCCCTATATCAA 19693 30 100.0 35 .............................. TATTGTTATAATAGCTTTTGTAAGTTGTGTTTAAA 19628 30 100.0 35 .............................. CTTAAAGCAGATTTTAAACCAACAGAAAAAGAAGT 19563 30 100.0 34 .............................. TAAACATACTTGATACAACTGCATTCATTAGTTC 19499 30 100.0 35 .............................. TTTAGAGTTTTCAGAGTCTCCAATGTTTCACTTCT 19434 30 100.0 35 .............................. GTAGTAACACGAGGGCTCTTTAGTTTATCAACAAA 19369 30 93.3 0 ..............CA.............. | ========== ====== ====== ====== ============================== ===================================== ================== 27 30 99.6 36 ATTGAATAATTACATTGGTAGTATTTAAAT # Left flank : AGAATTCTATCCTTTTAACATCAAGGAGAAGATTTAATGAGTAGGAATAGATATAATTTTAACTATATTTTTCTTTTTTATGATGTAAATGAAAAAAGAGTAAATAAGATTTTTAAAGTATGTAAAAAATATTTAACACATTATCAGAGATCTGTTTTTAGAGGAGAAATAACACCAGGTAATCTTCTAAAATTAAAAAATGAGGTAAGGAAAGTTATTAATGAAAAAGAGGACTCTGTATGTATAGTCAAATTTATAAATGATAGGTATTTTGCAGAAGATACACTAGGAGTGCTATGGAAAGAAGATGAAGATTGTTTTATATGAGTTTTCCAAGTGGAAAAATAAAAAAAACTTTGAAATCCTCATAAAATAATTGTTTGCAACGAAAAATATAGAATGTTGAAAATTTGATGTGAGGTTGGAAAAAAATTGAGGCATTCCTTAAAATATGGTATATTGAAAGAAAGTTGTGATTTCAGAGTAAGCTGATTATGACC # Right flank : ATACTTCACCTAAAAACTTACACAACTAAGAAGGACGGTGGAGTTTTTTAGTTTTAAGAACAGAGATTATTTTTATTCTAAAAGAGGCCTATATGTGGTATAATTAAAACATTGAAATAGAAGTAGGAAGTGAAATGATGGGAAAAATTATTTATTTTATAGGTGGAGCTAGAAGTGGAAAAAGCTCTAAAGCTGAAGGGTATATTTTTGCAAGAAATTATACTAAAAAAATATATGTTGCAACAGGTATAGCTTTTGATGAAGAGATGAAAGCTAGAGTAAAAAAACACCAAGAACAACGAGGCAATAACTGGTTGACAATTGAAGGATATAAAGACCTTGTAGAAAAAATAAAACCTCATGTTGAAGCAGGTGGGGTAATTCTTTTAGATTGTTTAACAAATATGGTAACAAATTTGATGATAATGGATAAAGAGTATGACTGGGATAAAATTTCAGTTGAAGAGGTTGAACAGTTGGAAAAGGAAATTACTGATACA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATAATTACATTGGTAGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 5930-8007 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGA010000074.1 Fusobacterium sp. DD40 JD54_73, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 5930 36 100.0 30 .................................... AATTTCAGCAATCGTAAACAGGAGAATATG 5996 36 100.0 30 .................................... GTGCAGCTGATATTCTTGCAGCACTATCCA 6062 36 100.0 30 .................................... TCTTCCCATGCCTAGGTGGCATATTTATAA 6128 36 100.0 29 .................................... ATTTTTAAATATTGTATTGTCTTTTATAA 6193 36 100.0 30 .................................... ATGGGACTAGAAGGGCTATTTGATAAGGTT 6259 36 100.0 30 .................................... CTTAGGAATAGCGGAGACAGAAGAAGAGAT 6325 36 100.0 30 .................................... TTACAAGAAAAGAAATTGATAGTTAAGGTT 6391 36 100.0 30 .................................... TGCAAGAGATAAGACCTAATCATTATAAGT 6457 36 100.0 30 .................................... TGGTATCAAAGGGTTGTTGTAAACGGAGAG 6523 36 100.0 30 .................................... GATGTTACAACTAGAAACCCTATGAAAGGC 6589 36 100.0 29 .................................... TATAGATGATATTCCAAAAGTAAATAAAG 6654 36 100.0 29 .................................... TAAAAAAAGAAAGTCTTTCGTCTGCCGTT 6719 36 100.0 30 .................................... ATTTGCATCCAAATATGAAAAGAGTTCGTT 6785 36 100.0 30 .................................... TGGTAAATATAAAGGAAGAAAACCTATTAC 6851 36 100.0 30 .................................... ATTGAACAATATTTTGAGATTAAATTCAAT 6917 36 100.0 30 .................................... TGACACTGGGATAGAATTCCCACAGATGTA 6983 36 100.0 30 .................................... TTTTGCCCAAATAAACTACTATTATCACCA 7049 36 100.0 30 .................................... AAGAAGCTCTCTAAAAACCACATATCAAAT 7115 36 100.0 30 .................................... GCAAAAGTTGTTTTTCCTGTCGAAGTACCT 7181 36 100.0 30 .................................... AAAGGTGATAAAGTTTCCATAGCTTCAGCA 7247 36 100.0 29 .................................... TAAATTAACTTCTTTAAACTGTTCTTCCC 7312 36 100.0 30 .................................... AAACTAGTTAGATTATCAATAGAAAGTTAT 7378 36 100.0 30 .................................... AACATTCCTTGGCTCTAAGTTTGTTGGTAG 7444 36 100.0 30 .................................... GGCTTCTTGAATTATGGCAACAATCAGCTA 7510 36 100.0 30 .................................... GTTGTAATCTTAATTGACTTATTACCAACT 7576 36 100.0 30 .................................... CGTTCCTAGGTATTATGGAATATGAGAGAA 7642 36 100.0 30 .................................... AACTCAACTGATATTCATCCACATGTTTAT 7708 36 100.0 30 .................................... GTAATGCATCTGGATTACGAGGGCTAATAG 7774 36 100.0 30 .................................... TTGCTTCAGGGCTCACTATTACATCCTCTA 7840 36 100.0 30 .................................... GAAGATGGAACAAATGAACTTGTCGGAGTT 7906 36 100.0 30 .................................... TAATAATTTTATGCAACTATATAACCACCT 7972 36 94.4 0 ...............G..................C. | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.8 30 GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Left flank : TTGTATTTCCAGAAAATAAAATTGCTTTAAAGGATATGCCAAAATTGCGAAATTTTTTGTTTGAATTGTCTAAAGAGAATAAAGTAATAGTGGCAACTTTTTCTAAATATCTTTTTGATTTTTCAACTTTGGATAATATTAATATTTATATTAATTCAAAATTAGCAAATTCTTTTACAGAAGATGAGATAATAAACGAAATTTATGAAAATTATCCGGTATTGAAGTCAAAAAATGAAATAAATGCTCTTCTATCTTTTGTATTAAAAAATTATTTATCTGATGTTTTACTTGGAAACATAATTACTAATAAATTTTTCTGTGAATTAGATAATGTTTTTATTGAAAATTATGAATTTATCTTCTTGCTCCTTTATTATTTAAAAAAGATAAGATTGAGTTATAAACTTAACTTGAACTATGATCCGACCTCTCCATTTTCGAACTATATAGAAGAAAAACTTTTAACATAATGTGATATATGTTAGAATAGATTTGAG # Right flank : CCAAGGAAAAAAGGTTCAGAACTAAGCGTCTGAACCTTTTGTTATTTTTCAACTATTAAAGAATAATCTTCTGGAGTATCTATATCTAAGAACTCCTGAGAATATGGAAAATCAACAAGAGAAACAAGTGGAGTATTTCTAATTATATTTTTTCCACCATGGTCACCTTGAAGAGCAAGAAGCTCTTCTTTTTTACTATATGGAAAGAATACAGGTGAATATCTATCTCCATTACTTGTTGGAACAGTTATATATCCATATTTTTCAAAGTTATAATAGAGTTTTGAAATAGTATCTGGTGTCAAAAAGACCTGGTCACCAGTAAAAAATACAAAACCTTTTCCTGAAGAGTTTTGAACTCCTAATTTAATACTTTCACTCTGTCCTAAATTTGCTTTGGTGTTGTGAAGATACTTACAATTATATTTTTTACAAATATTTTCAGTCCAGCTGTCCCTTCCACATACCAGTATTTCAAAAAAGTTGGCGAAATTAAGTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 9718-9425 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGA010000019.1 Fusobacterium sp. DD40 JD54_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 9717 29 100.0 38 ............................. TTACTGAAGAAGTTACTGAAGAGACAGAAGCTCAGGCA 9650 29 96.6 37 .............C............... TCTTGTTAACAAGTAAAGATTACAAGTTGCCATATTA 9584 29 96.6 37 ........T.................... CTACAAAATGGTACTGATAGAGCTTTTGGATGCGTTG 9518 29 100.0 37 ............................. GAAAATGACATTCAAGAAAAAAGTGTTCATGAAAGCG 9452 28 93.1 0 .............C..........-.... | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 97.3 38 TCTTAAAACATCCAATGTTACTATTCAAT # Left flank : TTTATATTCAGAATGCTCTTGTAGAAATATACCTTTAACTAAACTATAAAACAATTTATCATATGTTTTAAACTCTATACTTTCTGAGAATTTTTTATCACAGTACTCTCTATTTTTATCTTTTAGTTCATTTATAATGGAGTTATTATAGCTTAAAAAAAGCACCTTCTTATGTTTATTAAAAAGAGAGCCTGCTTGATCCTCTAAAATCATTTCAGCTCTGGCAAGTCCAACTAGTGTTTTCCCACTTCCTGCTGTCCCTTTTACTATTAAAATCCTTTCACTAGAGCCCACTATTGCAGCCTGTTCTTTTGATAGCTGTATCTTCATTTGACACCTCTTTATAAATGTGACCTGTTTTTCAATTTTATTATCCTCTATCAAGACCATATAATCAATACTTTTTTACTAAAAATTAAGTATTTAATTTTTAATTTCTCATTTTTAGCCATCTAGATATTTAAAATTTTTTCAAAAAATAAAAAAGACCCCTGAAAAGG # Right flank : GGTCAAATAACGACTTGTTATTATTTTATTTTACGTAACTCCCTTTACATCTAAAGTATAACATATTTTTTCCAAGCAATAACAGATTTTGCCTTTATTTCCATAAGTATCAATTTTAGATTAATTCACAAATTATCTATCAGTTCACTTGGAAAATTTACTAATTAAATGTACTACACCCTCCATCTTACTTATCCAAGACTTTAGGTGCAGTACACAAAATTATTTTAATTTACTATTCTTCTACTGGCTCTTTACACTCCTTAAATTTATCTATCACAAAGATATCCATACCATTAGAAACCTGATACTTTCCTTCCAGTTCATATCTTCCACTCTTAATAAGTCTTTTGCAGGCTCCAAAATCTTCATTATCAAGAAGATAAAGATATAAATCTTTTCCACGTACCTTTGCCTGGCAGCCTTTAGTGACAACATAAGCCACTCTGGTAATAACTCCATTATTCTCTTCTCTCTCTTTAACTTTTAGCATCTTATCA # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTAAAACATCCAATGTTACTATTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //