Array 1 27793-30199 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNAF01000009.1 Peptococcus niger strain DSM 20475, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 27793 28 100.0 33 ............................ TCATTGCCTTGCCCTACAAGTCCGAGCCCTGAA 27854 28 100.0 33 ............................ CGCTTGCGACGGTGTGTTCGCCCATTAGGGCCT 27915 28 100.0 33 ............................ TGAGCCGCGAGTTGCCCTACTCCCGGGAAGAAA 27976 28 100.0 33 ............................ CACCACCGGCCTGGTGGAATACGTTTTTGCCAA 28037 28 100.0 33 ............................ CCAATAATCCAATAGCACCTGCAACAAGAGCAA 28098 28 100.0 33 ............................ TCGGCCCGGTAGCTCCGGTGTCTGAGCTTGACT 28159 28 100.0 33 ............................ TGCGCCGGAGGGGGTGACGGCAGTCAGCAATAC 28220 28 100.0 33 ............................ TTCTTGTGATAGTTTTTAAAGATCATCTACGAA 28281 28 100.0 33 ............................ CTACTTGCGTGAGCAGACGGGCATCTACTGGAT 28342 28 100.0 32 ............................ TAAAGCCGCTCTTGAACAAAGCCTTCCTGAAG 28402 28 100.0 33 ............................ TGCCGCCCGGGAATTTGCCGAGTATGAGTACGA 28463 28 100.0 33 ............................ TATAAAATGACTCTATTTCTTCTTTAGTGGTAA 28524 28 100.0 33 ............................ TTCCGGCAGTGGCTGCAGCCGAGTAGCCCATCT 28585 28 100.0 33 ............................ TGACGCATGAAGTTGAAAAATAACGTGATATAC 28646 28 100.0 33 ............................ TTTGCAGAGGTTGCCGGCATGACGCAACAGGAA 28707 28 100.0 33 ............................ CCAAAGCCGAGACCCCTCGACAGAGCACCGGCC 28768 28 100.0 33 ............................ CAAGCACCACATTGGATATTTACAGTCATATTC 28829 28 100.0 33 ............................ CGATAGCGATCTCGCAGGTACAGGCCTGCGCAA 28890 28 100.0 33 ............................ TAACCGAATCGTGAGATAAGCTGTTAGGGAGGG 28951 28 100.0 34 ............................ TGGCAGATTGGATACGTTCGGACGCCAGGGCGAT 29013 28 100.0 33 ............................ CGAAAAATTGAGGAGTAAGTTTTGAATTGGGAA 29074 28 100.0 33 ............................ TACAATCGGGTCCACTAGGCCGTCACTCCTTTC 29135 28 100.0 33 ............................ TAGACGTACTATCATCAAGCGGACTTACTTGAA 29196 28 100.0 33 ............................ CGGGATTCACTGAAGCGGAATGCAAGGAAACGA 29257 28 100.0 33 ............................ TGCGTGATTGGATGACGTTTAAAGAAGTGGAGG 29318 28 100.0 33 ............................ CGGTGTCGATGGTGCGGCGTCCGTAGATGATAA 29379 28 100.0 33 ............................ CGTGATTGATATTCACGAGGGGGAATTGGTCCG 29440 28 100.0 33 ............................ CGATATACGTTTCCCAAAATTCCTGCGCCCTAT 29501 28 100.0 33 ............................ CGGCAGCTCAAAACCTTGTTTTGGCTTATGTGG 29562 28 100.0 33 ............................ TTAGCATGGTTTTTTCTTGCATATTGTGCCATT 29623 28 100.0 33 ............................ TTAATTTGTCGTATACATCGCCAAGCCCGTCCC 29684 28 100.0 33 ............................ CCGGTTGATGATTCCGTCCCTCTCTTCTGCCGG 29745 28 100.0 33 ............................ CCTTGCATCATCTTTAAAATTCTTTATGCTGGC 29806 28 100.0 33 ............................ CAGCACGCTGACCACGCAAGGCAGTAGCTACAC 29867 28 100.0 33 ............................ TTCTCCAGCCTTGCTTTGCAAGTACTCGTCAAA 29928 28 100.0 33 ............................ CGTTAGTAGAATACGAAATCGCACACATGAAAA 29989 28 100.0 33 ............................ CTCAGCGACGCTCATGCCGGATACATCCGCAAA 30050 28 100.0 33 ............................ CGCATGAGGATTGGCAGGGACTTAGAAGCCTAT 30111 28 100.0 33 ............................ CTCAGCAGCCACTACTGCAGCTCATGGGACAGA 30172 28 89.3 0 ........T.................TG | ========== ====== ====== ====== ============================ ================================== ================== 40 28 99.7 33 GTATTCCCCGCACACGCGGGGGTGATCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTATTCCCCGCACACGCGGGGGTGATCCTACGCTGTACCGTGTCCGATTCCCCGGTCGTGC # Right flank : GCTCTTACCGCTGGCGCCGTCGCCACTGGCCGGCGGTACAAAAGACTGGAAGCCGGCCCCGGTCGGCTTATCACCTGCGGGCGGTTCCTGTGCCTCCGGTTTCTTGGGCTCAAAGAGGTAGGGGCGCTTTTCCTGCATATGGGCCAGTTGCTTGTCCAGGCCTTCCAGCTTACCGTCTTTGACGATTAAAGCCTCCCGATCAAGCAGTTTTTTGACAATGTCGGCATCGTAGGCGCCGGACCCGGTCAGGCCCTTGTCTAAAAGGCTGTCAAAGCGCATGTCTTCTAGTTCTTTGACGCTGGCCTTGTACTTATCTTCCCAGTCGCCGGCGGACTTCTTGATGGCATCAATGTCCATGTCCTTGTAGCCCTTGATGGTTTCATTGGCTTCGGATAGCTGGCTTTGCAGGCTGTCCCGCTCCTTTTTGAGGCCTTCTGTCTTGTCCTGCTCGGCCTTGATGTCTTTACCGTTTTCTGCCATGATGGCGTCGATTTGCTCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //