Array 1 977592-977926 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM004509.1 Gilliamella apicola strain wkB7 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 977592 29 100.0 32 ............................. TCATGCATAACCTGTGAAAATTACTGTGATAA 977653 29 100.0 32 ............................. CGGTGCGTGCTGGTGCTGTAGTTTTTCGTGAC 977714 29 100.0 32 ............................. AGCAATTGCCACTTCATTTAAGAATTTATTAC 977775 29 100.0 33 ............................. AAATTAATAAATGACCTATTGAATAGCATAGAC 977837 29 100.0 32 ............................. GTAACGGCTCGGAAAACGTGGACACAGATCCA 977898 29 75.9 0 G...........C..........TTTT.T | ========== ====== ====== ====== ============================= ================================= ================== 6 29 96.0 32 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : GTAATGCACTAACATCAACTTTATAGCATTAATTAGCCAGTAATAAAAATACCTGTTAAATCAAAACAATTTGCTTAAAAACAATCAAAAAGTTGGTAAAATTTTAATTCTCCTATTTTAATTATAAAACAAAAATTTATAATTAGAGTGTTCCCTGTATATACAGGGATAAACCGTTTGGTTAGATGTGAATTTGATTGATCCAGATCGTGTTCCCTGTATATACAGGGATAAACCGTCGATGTGTTAATATTACATAGCATTTTTTGCTATTCAAAAATCGCAATTCTATATTTTATTGCTGACCATTTTTTAACTACATGAAAAATATAAATTTATCGGTAGAATCCCGTAGAATCTAATTTTAACTTCCATTAATTTTAATTAATTTAATAAAAACATATTGTTATATATTATGATTTTGATGAAAAATATCCCAAAAAATCGGTAGAAATTTGACGGTCAATATTTTAATTATAAAACAATATGTTATAATTGGT # Right flank : TTTTATGCAAGATTTTGCTAATTTTTGTTAAAAAGTTTCAGGTTATGCCTACGTTTCAGTATAAAAATATATAAAATTAATCTAGTTAACTGATCAATTATCCGATGCACAGTAATACGTTATCAAGAGACATAATAACTAATGTATTAAATCCATACCGCAACAAAGTGAACGGTTAAAGTAAGTCTTTGTTAGTTCTTGATGTTCATTAGTTATCTTCGTACAATAAAAAAAATTTTTATTTTGGTTTGTTATGCAATTACATTTAGTGGTTAATACGTTTGGATCCGATTTGCAGCGTCGTTATGGAGAAAAGATCTATAAATTAACGTTACATGGTGGATTTAGTTGTCCAAATCGTGATGGTACTCTTGGTGTTGGCGGTTGCACTTTTTGTAATGTTGCGTCAATTATCGATGAATCTATCCAAGTTAAATCTATTTCTGACCAGCTTGCAACTCAAGCGCATCAAATGAAAAAATCAAAGCGTTATCTTGCCT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1191448-1190809 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM004509.1 Gilliamella apicola strain wkB7 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ===================================== ================== 1191447 26 100.0 35 .......................... CCGCTATTGAGCGTGAATTCGAACTGTGGGCTAAC 1191386 26 100.0 35 .......................... CCGGGCTCGTGCAGTCAATGTCTATGACCCTAAAT 1191325 26 100.0 35 .......................... CCGCACGAAAATCCGCAAACCTAACCCAAAAACAA 1191264 26 100.0 35 .......................... CCGATTTTAGTCTCGTTGTAGATGAAAGCGAAAAT 1191203 26 100.0 35 .......................... CCGACACGGATATTACCATAGGCGGAGATTTCGGT 1191142 26 100.0 35 .......................... CCGGCTTGTATCGAGGTTTTGCAGGACATTATCAG 1191081 26 100.0 35 .......................... CTGGGCGTATAATTGATCGCCCTTAGTTAATAGGT 1191020 26 88.5 35 .............G..T.T....... CCAAAAATGAAATCGATTACAGTTTTTGTGAAATC 1190959 26 96.2 37 .........A................ CCGCTATAGTAATGGTACGCACAGATAATGCGTACGT 1190896 26 96.2 36 ..............G........... CCGGTTATATATTTGCACTAAATTACGCCCTTCGGC 1190834 26 96.2 0 ........................T. | ========== ====== ====== ====== ========================== ===================================== ================== 11 26 97.9 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : GCTTATTGAAGAAGTTTTGTCCGCTGGTGGTATCGAACCGCCTCTACCACCTGATGATGCCCTGCCACCCGCTATCCCAGAACCTCAATCTCTAGCCGATAGTGGCTTTAGGAGTCGCTAATATGAGTATGTGTATTGTGGTAACTGAAAATGTTCCACCACGATTACGTGGACGTTTAGCAATTTGGTTACTTGAAATTAGAGCCGGAGTTTATATTGGTGACATATCAAAACCAATAAGAGAAATGATATGGCAACAAATTGTTAAACTAGCAGAAGAAGGCAATGTTGTCCTTGCTTGGGCGACTAATACAGAATCAGGATTTGACTTCCAAACTTATGGCGCTAATAGAAGGGTTCCGGTAGATTTAGATGGACTAAGATTAGTCTCTTTTTTACCTATTGAAAATCAATAGGTTAACGTTCTTTAAAAAATTAAAAAAATTGGTAGATTTTTGGGTCGCCAATAAATCTAAATAAAACAATTATATATATTTAGA # Right flank : TAGTTAGATTAATTAGGTAAAGTAATGAAAGGCTTTTAGCTACAGGGTTATAAGCATATCTTCTCCTTAAAGTCTTAATAACGTTTTAACTTTATTTCTTTACCAATAATAGACATATATTTACTTTTATATTTTCATTAACATAAAAAATCGAATAATATTTATTAAAAATCTTGGATAGCTGTAAAATTCGTTTTAAAACACTAAAAATAAAGGTAACAGTTAACTAACTAAACTAATAATCAAAAATAGCGTACAATAGCGCGATATTAAACATATGATCATCATAAATAGTTTAGGAATTTAGCATGACAGGCAAATTTATTGTCATTGAAGGTATTGAAGGTGCGGGTAAAACGACAGCAGTCAATACCGTTGCTCGTATTTTAAATCAATATCATATTTGCGATTTACAATTTACTCGTGAACCAGGTGGTACACCAATTGCTGAAGCATTACGCAATCTTATTAAAAATGGTTTAGATGATGAACCTTTGACG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2725607-2726062 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM004509.1 Gilliamella apicola strain wkB7 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2725607 29 100.0 32 ............................. CTAAACAATTTGATGAACCAATCACAATTGCA 2725668 29 100.0 32 ............................. GTATGATGGTGGATCACGTTGTAGATTATATC 2725729 29 100.0 32 ............................. CTCTAGGTAAACCTATCGTCATTACATCTGGA 2725790 29 100.0 32 ............................. CAACGTAGTTATCAATGAAAATTGTCAGATAC 2725851 29 100.0 32 ............................. CCAAATTTCCTATTTCGTCGGTAGTCACGCCG 2725912 29 96.6 32 .....T....................... GCATTGATTTGTGTTTGCCTTTCTTGCCTTTT 2725973 29 100.0 32 ............................. ATTTGCGTGATGAGTTGTATCAATTACTGATT 2726034 29 79.3 0 G...........T.......T..T..T.A | ========== ====== ====== ====== ============================= ================================ ================== 8 29 97.0 32 CTGTTCCCTGTACACACAGGGATAAACCG # Left flank : TCAGTATAAAAGATAAATAAATAATCTAAATTAATTTTATGTTTATAAAAAAATATAATATTGAGCCAATATAAGTATTTACTTTTAAAACAGTATAATAAATTCCAAATAACCGCGCTTATAAAATTATTTTCATTCAAAAAGAATATATTGGATCACTCAAAATTACAGAAATGCACTTACTAAAAAAACACTACTTGAGTTTAATTTGTAAAAATTTTATAACTAAGCTACACATGCAAACAACTATAAAAATAGAGTCATTTTGATAACAACAAATCATTAAAAATAGAACAATAAAAATTCCTATTTTTAACTACATGAAAAATATATATTTATTGGTAGAATTCCGTAGAATCGAAATTTAATTTCCATTAATTTTAATTAATCAAATAAAAACAGTGTGTTATAAATACAGATTTTAATAAAAAATAGCCTAAAAAATCGGTAGAAATTTGGTGGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : AATAGTAGACATGAATTTTAACTCTACTCAGTTACAGTTGTTTAGTATTTATAAACAAACCTTAGCCACTGTCATCGACCAGTTGAATAATTTGCGAGAAAAAAACAGAATCGCCAGTGTTAAAACGGTTATGCTTTATTGCTATTACAGAATTACAGAGTGCGCAAATGTGATTCGTCAAATCTTTTACTTTCTCAGATATCCGTTCATAACCAAATATCTATTTACATTCATTAACCTAAAAAATAGGATTTATATAGTTATATTGTATAAAATATTTCCATATTAAAAATGGATATAAAGCACTTGAGAATATAGCATGATTAAACAAATAGCTGTATTGGGAGATATAACTAATTATGGTGGTAGGATTATTACAGCCTCAGGGAATGGTTATTGTGGTATTGATGGTGTCGCCTTATTGGGCGATTTAGCATCTTGCCCTAAATGTAGAAGCACAGGAAGGATCATAGAGGGGGCAAGTAATTTTATTATTGACG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCTGTACACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 2728704-2728976 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM004509.1 Gilliamella apicola strain wkB7 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2728704 29 100.0 32 ............................. TCCCACCAGTGTTTGCGGATTATTGACGTGTT 2728765 29 100.0 32 ............................. GAGGGCGAGCGATTTATCGCAGTAGATACTGG 2728826 29 100.0 32 ............................. CTAAAAAATTGGTGGCTGAAAAATTAAACGAT 2728887 29 100.0 32 ............................. GCAGAACTAGACACAGAAGCAATCAGTGGATA 2728948 29 79.3 0 GC..........TG............T.A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.9 32 CTGTTCCCTGTACACACAGGGATAAACCG # Left flank : TCAGTATAAAAATCAATAAATAATTTATTTTAAATCTATGATTATAGACAAAATACCATGTTGAGCTGACATAAAGTTTTATTTTTAATATTGAGTAATAGATCACAAATAACAGCGCTTATAAAATTATTTTCATTCAAAAAGAATATATTGGATCACTCAAAATTACAGAAATGCACTTACTAAAAAAACACTACTTGAGTTTAATTTGTAAAAATTTTATAACTAAGCTACACATGCAAACAACTATAAAAATAGAGTCATTTTGATAACAACAAATCATTAAAAATAGAACAATAAAAATTCCTATTTTTAACTACATGAAAAATATAAATTTATTGGTAGAATTCCGTAGAATCTAATTTTAATTTCCATCAATTCTAATTAATTAAATAAAAACAGTGCGTTATTAATACCGATTTTAATAAAAAATAGCCTAAAAAATTGGTAGAAATTTGGTGGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : ATAATAGATTAGAAGTTGTTAACTTTATATGAATGGATTCTAAATATTATTTATACGACATATATTTGATTGATTAATGAGTTTTTAAGGATTGCATGGTAAAAGTATAAAATAAATGAATTTTTACCTATCAGTATAGATAAGCAACTAAACTTATAAATACAAAGTTATTTTATTGATTATGCTCAATAGCGCTTACAGAATTTGTTTTGTTTATAACTGCATATTACGATCTCTTTCCATAAAATAGTTTATGAAAAGTCTTCTTTTTAAAAGGAATTAATAATTTATTCACTTAACTGCTTAGGCGGTTTTTTATTGCCCAAATCATCTAAATAAAATACTATTACCCAAAATAAAATTTAAAGTATGAAAAAAATTTAATTATTTTATCATCTGTTATTATTCAATAATAAATGGAAGTAAGGAATGAAAAATTTAATTGCAATTTCAATATTAACTTTGATCGGTTTCAACGCTTTTGCTAATGATAATGCAAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCTGTACACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.20,-10.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 2730622-2731016 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM004509.1 Gilliamella apicola strain wkB7 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2730622 29 100.0 32 ............................. CAGCAAAAACGCGTATTTGAGTATTACCGATA 2730683 29 100.0 32 ............................. CACTGATGCATTAGGGTTAGGTTTTTGACCTG 2730744 29 100.0 32 ............................. GCACAGAATCGATCCAATCTAATTTATACGCT 2730805 29 100.0 32 ............................. CGATCGAGGCGTTCGTCACATTGAAATAACTA 2730866 29 100.0 32 ............................. TCAACGAAAACCAGATCCCCAGCCTCAATCGT 2730927 29 100.0 32 ............................. CTTGAAAAAAAATTAGGTGTATTTACAGAAAA 2730988 29 96.6 0 ..............T.............. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.5 32 ATGTTCCCTGTATACACAGGGATAAACCG # Left flank : AAACAGACTAATTTCTATATTAGATTAGTCTAGAAAAGTATTTCTTATACATATAGATAAAACAGCTTTATTTGTAAATTAACCTAATTTAGGTTATTGGCATATGCATTAATTTATCATTTATCTATAATAATATATGGTTTTTTGTGTACCCAGTATGTACAGGGATAAACCGAATATGCCGAGCAGGCGAGAAAGCTGTCTCTGATGTTCCCTGTATATACAGGGATAAATCGGGGATGCGTCAATATTACATAGCATTTTTTTGCTATTCAAATAATCGCAATTCTATATTTCATTGTTTGCCAATTTGTAATTATATGAAAAATATAAATTTATTGTTGGAATCCCGTAGAATCGAATTTTAATTCCCATCAATTTTAATTAATTTAATAAAAACATAGTGTTATAAATGCTAATTTTGATAAAAAATAGCCAAAAAAATCGGTAGAAATTTCACAGTCAATATTTTAATTATAAAACAGTATGTTATAATTGGT # Right flank : GCCCTAGTGGCGATTTTTCATTGCCCTTAATTTTTAAATAACATACCATTACCTAAAAAAGGAGATGGTATGAAAAGAATTGCATTACTAGGATTGGTTTGTTTTGCGTTGTCTGGTTGTGGTGATGATGGTGATGATGGTGGCGGTAAAGTTACTAATGAGTTTTTGGTTGGTAAGTGGGAGTGTAAATTGGACGGTTACAGATCGAAAATGAAAAATGGAAAATTTACTGATTATGTTACCGATGGGTTTAATATAATAAGGAAGGTAGAATTCAAAATAGAAAATAATAAACTGTATAGTATAAGTAAAACTGAAATGGATGGACTTAGTTTTTGGGAATCGAATGATTGGGATGAAAGTGATATAACTATTACTCATACGGGGCAAACAGTAGAGAAAAAAGAAAATAATTTAATAGAAAAATCAACCAATTCTCTAATTAAAAAATCACATGATACTTATTTAATGATTGAGGAATATATTAAAACTCCAAATGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 2826218-2826429 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM004509.1 Gilliamella apicola strain wkB7 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2826218 29 100.0 32 ............................. TACTCTTGTTGCTGCAAATAAAGCGCGAGAGC 2826279 29 100.0 32 ............................. CTATAAAATACGCTGATTCAATGGCTACCTCT 2826340 29 96.6 32 ............T................ TATTCCACATGAGGGGCATTCAAATTCATCAT 2826401 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGTTCCCTGTACACACAGGGATAAACCG # Left flank : ATATTAATGAAATTAATAATTTGATAAAAAAAGGGAAAAAGTTAGTGGTTAGAGCTGAATTTTCAAAAACTAAAGATTTTGAGTTCTCTCTAGCTGGCTTTGCAAAAGCCTATAAAAAATTGCAAAAAAATTGTTCTACCAACTAATCAATGTTCCCTGTACGCGCAGGGATAAACCATATTTGACGTAATACATAGTGGTTTAGATCCTATATCCCCTGTGCACACAAGGATAAATCGGCAAGCATCAATATTACATAGTATTTTTTGCTATTCAAAAATCGCAATTATATATTTCATTATTTACCATTTATTAATTACATGAAAAATATAAATTTATCGGTAGAATCTCGTGCAATCTAATTTTAATTTACATTAATTTTAATTAATCTAATAAAAACATATGGTTATAGATATTGATTTTAATAAAAAATAGCTTAAAAAATCGGTAGAAATTTAAAAGTCAATATTTTAATTATAAAACAGTATGTTATAATTAGA # Right flank : AATATATTCTATAGATAAAACTCGTTATTATTAATAAGAACTATATTGCTAATTTAAGGATGAATTTTCATGTGTGCATCTAATAAGGATAACTTCCCAAAAAAATTAATAAAAACTCCACTAAAAAATGGATTCTATTATAATAGAAGACCAAATAATAAAGTTGACTTTTCTAATCTTCAGACTTTTCCCACATTTTACAGTCGTCATGACAACTTTTTGTGGATCAAAGAATTTGTTTTTTATAAAAATGGTATTCGAGTATGTGTTTTTCATGATGTCGCAATTAACCTAGAAAAAACAATTATAATGATAGGAAAATTCGAAGTTGAACTAAAATATTTGCTAGAGCTAAAACGTCGAAATGGAGGTAGAGATTCTCTAATCGCTTTAGCCAATGAAGTAAAAAAAACAATTGACTCAGTTAATCAGATTCAATTTAAACTTACACTTACACCATGGACATATTCATCCACGATTATTGATAATACATTAGTCCG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTACACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //