Array 1 159111-160847 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABEQH010000004.1 Gluconacetobacter johannae strain LMG 21312 contig00004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 159111 29 100.0 32 ............................. GCGGCCTATCGCTGGGCGTTCGGCTGGCTGGG 159172 29 100.0 32 ............................. GCGAACGCCGGGCTGGCGAGATTGGGACGAAC 159233 29 100.0 32 ............................. ACATCTGAGCATTCGCCCACGGCTGAGTGGCC 159294 29 100.0 32 ............................. TCTTCCAGCAACCTACGCAGACGCGGGCTGGT 159355 29 100.0 32 ............................. GAGGGGCATCGTCCCTGGAAACCTGGCTCAGC 159416 29 100.0 32 ............................. ACGGGCTCCGGGGTAGTACGCGTTCGCGATCG 159477 29 100.0 32 ............................. CTGGCGAGAACGGCGAGAAGCATTGGCACGAA 159538 29 100.0 32 ............................. AGGAATTTTTCTTCCATCGCGAATTGCCTGCC 159599 29 100.0 32 ............................. ACCCAATAGGCCGTCTCCCCGTCGTCGTCCTC 159660 29 100.0 32 ............................. GAAATCGCGCTGCTGGGCTTCGACGCGCAAGC 159721 29 100.0 32 ............................. GCGGTCGCCGCCTGATCCCACCGTGGGGACCG 159782 29 100.0 32 ............................. AAATTGCCCGGCTCGGCGGCCGGGGCCGGGGC 159843 29 100.0 32 ............................. CCCTCGGACCAATGGAGCCCCTGCCCCTGCGC 159904 29 100.0 32 ............................. CTGGCCTGGCGCGAGGAAAGCGGGGACGATTG 159965 29 100.0 32 ............................. TTCACCACGACGGCGACCCAGCGCCGCCGCAT 160026 29 100.0 32 ............................. GCCCTGCGCGCCAACGAATGTCAGAACCCCAT 160087 29 100.0 32 ............................. GTGACCGACCCGGCGCACTGGTAGGTGTTCCC 160148 29 100.0 32 ............................. AGCTTTCGAGAACGATTGCGGAAATTAACCGT 160209 29 96.6 32 .............A............... TGTCATACCAGCCCGTAACCGGTGTCGGCTGG 160270 29 96.6 32 .......T..................... GCCTGTGGGATGGCGAAACCCTGACGGACTGC 160331 29 100.0 32 ............................. ACGAACGTCCATCCTTTCGAACTGGCAGTCTG 160392 29 100.0 32 ............................. GCGGGACTGGAACAGTCGCTGGATGGACGGGC 160453 29 100.0 32 ............................. GGTGCTGATACGGTGCCGCCGGAAACTCGACC 160514 29 100.0 32 ............................. TCCGCGCACAGTTGCGGGCGCTCGGCGGTCAC 160575 29 100.0 32 ............................. GTCGTCATTCTGGAACTGGTCCAGCCCGAACG 160636 29 100.0 32 ............................. ACCTGCATCGGCCGGGCATTGCCGGTGACGGC 160697 29 100.0 32 ............................. TCCTGGGCGACGTCACCCTGCCCGACATGAAT 160758 29 96.6 32 ...........G................. ACGGCCGACGATTTCAGCGACCGCGCCCGCGC 160819 29 86.2 0 ......T..................GTG. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 99.2 32 GTGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : GGTTCTGGCCGCAGGCGGTCTGGACATGCCACCGGCACAGGACGAGGCCATGCCCGTGGCATTCGAAGACCAGAAAGGATTGGGCGATGCTGGTCATCGTGGTTGAGAACGCGCCCCCGCGCCTGCGCGGGCGGTTGGCGGTCTGGCTTCTGGAGGTGCGTGCCGGCGTCTATGTCGGCAATTACGGCCGGCGCATCCGCGAGATGATCTGGGGCCAGGTGTGTGCTTATATCGAGGATGGCAATGCCGTCATCGCCTGGGCTGCTCCGAACGACGCCGGGTTCGAGTTCGATACCTGTGGCCGGAACCGGCGTGTCCCTGTTGACTTCGACGGATTCCGACTGGTCTCATTCGGGCCGGAAGCCGCCCTTCCGGTGCAGCCGGGACCAGCGGCCGCCACACCTCCGCGCCGGCGGGGGCGTGGGTGATAAAACAGGCCTTCAGTCGGTAGGATCTTTGACAACAAAATAGATGTTTAATATCAATGCGCTCCAGGAAGT # Right flank : GAGCGGGGCGGCCGTTTTTCAAGCTGAGGTGCTGCGGGTCCACGCGTTGGAGGATGCCGAAAGGCGCCCTGCGAACAGGGTGAGGCAACTGGTAGCTGCATGCCGCCATCCGGCGGTCAGGAGGCGTCCCGATCCGGCATCGCTTCGCGTAGGAAGCGGAACAGGCGCGGGTCGTTGGCGTGGATGACGTTCAGGCGCATCCAGGGTGTTTCGGCCTGGTCGGGCCGAAACAGGCAGCCGGGGGCCAGCATGATGTCTTGCGTTGCCGCGTGTTCGGCCAGAGCGCGCATATCCATCGGTCGTCGGGGGGCGGCCCAGACGAACATTCCGCCGTCCGGGCGGCAGAACAGGTCCAGCCCGGCCGCATCCAGCGCGTCGCACAGCGATTTGCGCGCCGTGGCCAGCCTGTCGCGCACGCGGGCCAGGTGCAGGCGATAGCGGCCTTCGGTCAGGATGGTGTGGACGATGCTTTCGCCCAGGCCCGAACTGGTCAGGCTGCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //