Array 1 37-793 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKF01000036.1 Fusobacterium hwasookii ChDC F174 Contig036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 37 30 100.0 36 .............................. GAGTTTCTCTTTGTTAGAGGGACTGTATATTTTGGG 103 30 100.0 34 .............................. TCTGATTCAATCAATTCAACAGGTCTTGACATTA 167 30 100.0 37 .............................. ACAAAATTTGTTGCTAATAATTTATTGGTAATCTTAG 234 30 100.0 37 .............................. CAGCATGGACAACACTCTGAAAAAATATTTTTAAACT 301 30 100.0 37 .............................. TCTGAATTAAATCATAATGAAGGAAGAGCGTTTTATT 368 30 100.0 36 .............................. ACTAACAATTCTTATAGAAGCATCTGATGGACTAGC 434 30 100.0 36 .............................. GTGATATTTTTTGGTATAATGATATTATTTAATTTA 500 30 100.0 37 .............................. TTAGACAACAATAGTCTTTTGAATAGATTGGAAAATT 567 30 100.0 36 .............................. CCTTTTGTTACTCTAACAGATAATGATACAGGAGCA 633 30 100.0 35 .............................. GTAAGTCGGGATTATGAAATAGAAAACAAAATTGA 698 30 96.7 36 .............C................ CTGTTACTCCTGTACAAACTAATGTAAATTCTCTTT 764 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 99.5 36 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : AAGTACTTAATGCATCTTTAATTACATCATAATCTTA # Right flank : ATAAATCAGTTTTTATAGTGTTAAGTGTAGCTTAATAAAGTAAATTAAAAATTAAATATAGATAAAGTAATAAAGAAAATAAAAAAACGAATTTAAACTAAAACATTAATATAATGAACATAAAATTTTAAGATGGTGAAAGAAAAAAAATTAAATGTAAAAATAATAAATTTTTAGCAAAAATTAGGTAAATTTCTCAATAAAAATATTGCATTTAATCATAATCAGTGTTAATATATACTTAATAAATTTGAAAGATAAATTTAAGGTTTTATCTACTAAAAATAGGGAGTGATTATAATGAGTTTTTTAGGACAAGTTAGAAAGAAAGCCTTACAAGCAAACAGAAGAATAGTTTTACCTGAATCAAGTGATGAAAGAGTAATAAGAGCAACTTCACAAATTTTAAAAGAAGGTTTAGCACAAGTTATTCTTGTAGGAAATCATGAAACAATAATGAATAGTGCAAAAGCTTATGAAGTTTCATTAAGTGGAGTAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 48413-51516 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKF01000035.1 Fusobacterium hwasookii ChDC F174 Contig035, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 48413 30 100.0 36 .............................. TTTTATTTTCTTTATGATACTTTTTATATTGTCAAT 48479 30 100.0 36 .............................. TTTTATATCTGCTTCCTTATCAACACTTCCCTTAGC 48545 30 100.0 35 .............................. GCTATAACAATTAGGGTAACTGGAGCTAAGAACAC 48610 30 100.0 35 .............................. ACTTTTCTTGATAATATTACAACACATTCTGTTTT 48675 30 100.0 37 .............................. GTAGGATATCAGCAATTCAAAACTTAAAATTAGAGCA 48742 30 100.0 36 .............................. GCAAAAGATATTTTAAAGTCAACTATGAAATGATTG 48808 30 100.0 37 .............................. CCAAAAAAGCCCTATATAACTTATCAAGTTTTAAATA 48875 30 100.0 36 .............................. GGAAATTTAAAAAAATTAGCTAATGAGGTTAAGAAT 48941 30 100.0 36 .............................. ATGTATTTATTAGATGAAAAAGGACTAAGAAAAGCA 49007 30 100.0 36 .............................. TTCTATTATCTATTCCTAAATCTCTATGGAGTGGTA 49073 30 100.0 36 .............................. TTTAAGTCTAATCTTTCTTCTCTTGAATATTTTAAG 49139 30 100.0 38 .............................. ATTTTTGAAATACTTTACAGTGCATTTTTTTCTCCTAT 49207 30 100.0 37 .............................. GCAAACCAGGCAGAGCCATGTAGAATAAGATCCTCTT 49274 30 100.0 37 .............................. CCTTTTTGTGTTTTTTAATCACATTTGTATGATATCA 49341 30 100.0 37 .............................. TCTTGTCTGATAGAAATAAGATTAGAACTTTTAGTAT 49408 30 100.0 37 .............................. GGAAAAGTAAATTGCAAAATGAAGGATACAAGGATAG 49475 30 100.0 39 .............................. TTGTTCCAAGGAATGAAACCTCTTTTAAAAGACCCTCTA 49544 30 100.0 39 .............................. ATGTTTTATGAGCTTTTAAACAATATTTTTCTAATACTA 49613 30 100.0 35 .............................. GTTATCACTTACAGGGGTTGCTGCAAAATGTGAGA 49678 30 100.0 37 .............................. TAATTTAAGTAATTCTTTACACTTTTGAAAAAAGAAA 49745 30 100.0 37 .............................. TTAGAAAATAATCAAATATATATTTATAGCCATTCAT 49812 30 100.0 37 .............................. CTGTGGAAAATCTAATCAGTCTTAAAAACACAGGAAA 49879 30 100.0 38 .............................. CTTTTAAGTATTAGCTTGAACAATGTTGAGGAATTTGA 49947 30 100.0 39 .............................. CATTCTTCAACAGCTTCATCATTGTTTACCGTTTCTTTT 50016 30 100.0 37 .............................. ATAGTTGGCTTCAATAACTTTTATAGTTTCTATGTTC 50083 30 100.0 36 .............................. AAACATCAAAATAAGTTTGGTTCACAAAAACTTTTG 50149 30 100.0 38 .............................. GGAACTGATTTTACTCTAAATATGAATTTGAATTGATG 50217 30 100.0 38 .............................. ACGTTATGTTCAGCAAATAATCTTCTTTCTTGGTTATA 50285 30 100.0 37 .............................. TGGGGAATTGGTATAGGTTTAGAAAACTTAGATTTAT 50352 30 100.0 37 .............................. AAGTTCTTAATGAATAAAAAGGGTGTTTGCTGAAATT 50419 30 100.0 37 .............................. GTTAAATTATGGGGAAGTTATTTAGAATTTCAAAATG 50486 30 100.0 35 .............................. CCTTGTAAAGTATCTAATAAGTCAGATAAAACCTT 50551 30 100.0 38 .............................. ATATCAACGGCATATCCAAGTCCATCAATCTTTTCTTG 50619 30 100.0 37 .............................. AACAGAACAGGTCGAACAAAACTTGAAAAAGAATATT 50686 30 100.0 37 .............................. CTTAAATGGATTTTACAACAAATCTATTTAAAAAGCA 50753 30 100.0 37 .............................. GTTATAGCTCTTTCTACACCATTTGGGATATTTCTTA 50820 30 100.0 37 .............................. GAGTTAAGACTTGCAGAACATGAAAAAACTGATGATG 50887 30 100.0 37 .............................. AAAAGTTAGAGAAAGAATACAGAAAGATGATGGTAGA 50954 30 100.0 36 .............................. ATTTGCTTCTTAGGTCTGCTGGTTCTATCCATGCAG 51020 30 100.0 37 .............................. AGAAGTGTATAACAGATTTTCTAACATATTTACTTTC 51087 30 100.0 39 .............................. TAAGTCTTAGAAAATTTCTTACCATGTGCTTCTATTTCA 51156 30 96.7 37 ...............C.............. GATTTTGAGGCTATGGCAAAAGAAAATTTAGAACTAA 51223 30 100.0 38 .............................. AAAATAAGTGGATAATACTCTCCATTTTCACAGATTTT 51291 30 100.0 36 .............................. ATTCTTGTTTCATTACTTCATTTCTTACTTCAGTTG 51357 30 100.0 35 .............................. TACAATAGATGCAACAAGATACGCATTTTCTAATG 51422 30 100.0 35 .............................. AAAAGGGAGAACTATTTTATATGATAGCAATGGCA 51487 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 47 30 99.9 37 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : AATCTTTTCAAATGTGGTGGTGATAAAATGTATGTAGTTGCAGTGTATGATATTTCATTGGATGAAAAAGGTAGTCGGAATTGGAGAAAAATTTTTGGAGTTTGTAAAAGATATCTTCACCATATTCAAAATTCTGTCTTTGAAGGAGAATTATCAGAAGTTGATATTCAAAGATTAAAATATGAAGTTTCAAAATATATTAGAGATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTATAAATTTTATTGTCTACCTCTGATAATGTAAAATTAGTGGAAGAATGACAAAAGTTATAAAATCGTTTATTTATAAATAAATTTAAGAAAACAAAAAATTTTAAAGAATCAGAGTTTTTTATTTTTTACTAAAAAAACTTACATTGACAAAAAGATATTAAAAAAGTATTATGTAGGAGTAGCTTTTTTAGCTATCT # Right flank : AATAGATAGTATTGAATGTTCAATAGAAGCAGATTCAATTTATGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 44-696 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKF01000065.1 Fusobacterium hwasookii ChDC F174 Contig065, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 44 36 100.0 41 .................................... GCTTCATATACACTAGGCATATATATTTGGAAACCGTCTAC 121 36 100.0 41 .................................... ATTTTTGCTTCCTCACTTTTAAAATATAAATCTTCCATTAA 198 36 100.0 43 .................................... TATATTAATTTTTGTGTTTGTCTTGTGTATCCTAATTTCTCTA 277 36 100.0 41 .................................... CTTTTTATAATTTTCTTTGTTAATCTGTGTTCAAGTCTAAG 354 36 100.0 42 .................................... AATATTTCTTTTATTTCACTATAAAATCTTCCTTTACTTCCA 432 36 100.0 40 .................................... TTACTAGAAGTTATAAATCTTTCAAATAATCTAGTATATA 508 36 97.2 39 ....................A............... CTTATCAATACTTACCTTATAAATTTTTTGATATCCCAT 583 36 94.4 42 ........T...........A............... GTAATATATAATATGATTTGTAGTTTTGCTTCTTTATATTCT 661 36 75.0 0 ........T...................TTCCTTTT | ========== ====== ====== ====== ==================================== =========================================== ================== 9 36 96.3 41 ATAAGAGAGAATATAACTCCGATAGGAGACGGAAAC # Left flank : CCACTATAATACTTTAAATCTCATAAATAAAACAAGTCCACTAA # Right flank : TATTGACAAAAATCAATATATTTTTATAATACTAATATAAGAAAATACAGAGATATTACAATATTTGTCAAGAATTTCTCACAATTGAAATTTTTATAGAAAGAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAATTATTATTTTTAACATTATTTGTAGGAATTTGTATAACTGGAGTAGCAAGTACAAAAGAAAAAAATCCAATTCTTATGAAACAAGTATTTAAAAAGGAAGAATTAATAACATTAGACAAAGAAAATGTAGCAGGAGGAAAAGGAACTTTAAAGGGAAAATTTGCTTTTACTAGAGATATGGCTACTGAAGATGAAGCCATAAAAGAAATAGGTTGGATGACATTAAACAAAGGAGAATCTGTTGGAGTACACCCTCATAAGAATAATGAAGACACTTACATTATTATTTCTGGAGAAGGAATATTTACAGATGGTTCTGGAAAAGAAACAGTAGTTAAAGCTGGAGATGTAACTATTGCA # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAGAGAATATAACTCCGATAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //