Array 1 36415-36562 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIJDO010000118.1 Flavobacterium chungangense isolate CIP110025, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 36415 36 100.0 27 .................................... CCAAATCAACTGATGCATACAAATAAT 36478 36 100.0 30 .................................... ATAGTTATAAAAAAAGACGATCTTATAAAA 36544 19 52.8 0 ...................----------------- | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 84.3 29 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TGAGAGAAAATATAGGTGGTGCCGAGCAGTTAAAAGATAATTTAAATCAATGGGTAAATCCACGAAATAATCATCACGTGCTTATTTATAAAGATGAGAAAGGAAATTTAAAAGAAGAAGTCGTGACTTTCTGGACAGTAGTAGAAAGAAAAAGAAAAGGTTTTCCAACTTATCAATTGCCATTAGATGGCAAGGAAATAGTTACGACTTTGCATATTAATGATATGTTTTTATTAGGGTTAAATGAAGATGAGGTAAATTGGGAAAATCCTGATTATGAAATTTTAAGAGATAGTTTTTACAGGGTTCAAAGTTTGTCTTCCAAATATTATGAATTTAGACAGTCTATTAATGCAGAATCTCAAAATAAAGTTTCACCTATTTATGAACAAATAAGAGGATTTGGCTCAGGTAAAACAGGTTGGGATTCTTTTAATCCAATCAAAGTAAAAGTTTCAGTTTCCGGAAAAATTTCAAAAATGTAATTCTACTTTAAAAAT # Right flank : | # Questionable array : NO Score: 4.46 # Score Detail : 1:0, 2:3, 3:0, 4:0.21, 5:0, 6:0.25, 7:-0.09, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.36%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 6601-5116 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIJDO010000137.1 Flavobacterium chungangense isolate CIP110025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 6600 36 100.0 30 .................................... ACAATTCAAAACTTACCTTTGTAAGCTCCG 6534 36 100.0 29 .................................... AAGATAGCGTAATCTTCTGCTAATATAGA 6469 36 100.0 30 .................................... CCAGAGCTGTTTTATTGTATGCCGTGAAAA 6403 36 100.0 29 .................................... TCAAACTCATAAATGTACGCACTAATGTC 6338 36 100.0 30 .................................... TCCTAACGGTAGCGTTTCTGCTAATCCTGT 6272 36 100.0 30 .................................... AAAACCAGCGACAACCCGTTTTTGCCTGAC 6206 36 100.0 30 .................................... AAACTTGGTATTTTTCCTTTGTTTCTTCGT 6140 36 100.0 30 .................................... ACGACGTTTACACCAGAACTACTGACAGTA 6074 36 100.0 30 .................................... ATGGAACTATCCGCAATGTTCCCGGCTTAC 6008 36 100.0 30 .................................... GAAGAATTTATAGATGGCAAGTAATTAATC 5942 36 100.0 30 .................................... TGCGTAGACGTTTACTTGTCTCATGCAAAG 5876 36 100.0 30 .................................... ACAAATCGGCATAAGGTGTCAGATCGTTTT 5810 36 100.0 30 .................................... GAAGAATCAGAAAAACCAAAAACAGAAATA 5744 36 100.0 30 .................................... CAGCCATTCCAATAACTATATCTTCAACAA 5678 36 100.0 30 .................................... CTCACCTGTTTTAGCAACAAATCCGCCACC 5612 36 100.0 29 .................................... CAATAAATACTGAAGCCGAATACGATAAA 5547 36 100.0 29 .................................... AAGATTAAACAGGCAAGGAGCAGAATTAG 5482 36 100.0 30 .................................... GGAACCAAGCTACATAATGGGTATAGTTAG 5416 36 100.0 30 .................................... GATAATACTATTGCACAGTTCGAAGCTGCT 5350 36 100.0 30 .................................... GCTCGTTTTGATGTGAAAAACACCACTTCT 5284 36 100.0 31 .................................... CAGCAAAGTATTTAATGTTGCCGCCTCCGTC 5217 36 100.0 30 .................................... GTACGCGCAAGCATACAAGACATATATAGA 5151 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TACGTTAGTGCTTGTTTG # Right flank : AGTTGGCTTGTTACCATCTAATAATCAAAAGATTAAATTGAAATATCGTATAAAAAAATGCTTCTTTTTTGGATTGATAACCCACGATTGAAGCATTTTTTTGTTTCTAAATAATAATTTAGTTCAGTTTAGGCTAAAACAATTCCAGTTGTGTAGGCTGAGGAGCAGATGGCACGGCTGCTTTTCCCCAGAAATTCAAAATATTGCCAAATTGTTTATCGGTTATTCGTAGCACGCTTACTTTGCCTAAAGGCGGTAGTAGTTTGTGGATTCTCTTTTCATGAACATCAGCGCTTTCACTACTTGCGCAGTGACGTACATAAACAGAATACTGCATCATTGAAAAGCCGTCCTTCAATAAATTAGTTCTAAATCCGGACGCATTTCTTCTGTCTTTTTTTGTTTCTGTGGGAAGATCAAAGAAAACAAACAGCCACATTATTCGATATCCGTTAAGCTCCATAGTACAGGATATTTAATTTTTTTTCGATTTCCCGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //