Array 1 324-596 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTBZ01000031.1 Flavobacterium psychrophilum strain FPG92 Contig_47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 324 46 100.0 30 .............................................. AGGCGCAAGAAATGGATAATGTAGATGCTA 400 46 100.0 30 .............................................. AGGATTTGTACAAGGATGGAATCGAGACAA 476 46 100.0 29 .............................................. CAAAACACTTCCTCTATAATATATACGTG 551 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 4 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ATAAGCATACACTCGAATTTAGAAATATTTATGAAGAAACAAGCAAAGAGATAGCAAGAGAAAAAATGACTAATTGGGTGCAAAAAACCAAGCAACTCAATATGACTGTTTTTAATACCGCTGCAAATAGTTTGAATTATCATTTAGAAACCATTTTGAACTTCTTCAAAAACAGACATACCAACGCAAATGCTGAGTCATTTAATTCTAAAATAAAACTCTTTAGAGCAAATCAAAGAGGTGTAGTAGATGTGAAATTCTTTCTCTTTAGAATGGAAAAACTTTTTGCTTAATCCCCATAAAATTTATGTGACCCCAAATCAG # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGCTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 112804-116872 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTBZ01000030.1 Flavobacterium psychrophilum strain FPG92 Contig_58, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 112804 46 93.5 30 T....T...G.................................... TAACAATAGATCAATACGGTAGAACCGTTG G [112806] 112881 46 100.0 30 .............................................. TAGTGGTAATGTTACCGTAGTTGCAAATCA 112957 46 100.0 30 .............................................. CAATAATCAAATCTTTTATATTGATTTCAG 113033 46 100.0 29 .............................................. TAGCGTTTAAATAGGTGCTAACGTTTCGC 113108 46 100.0 30 .............................................. TCAGTATTTGCAATGTTTTATCAAATGGCA 113184 46 100.0 30 .............................................. GCAGGGGACAATGTGCATAGTTCGGTTGCT 113260 46 100.0 30 .............................................. GAAGTCCTCAGTTGCTTCAATCGAATTACC 113336 46 100.0 30 .............................................. ATCCATCTCTATTTTTGTATTCATCTACAA 113412 46 100.0 30 .............................................. CGTTTATTTTTTCATAGTCCTGTTCGGCTT 113488 46 100.0 31 .............................................. TTGGCAATCCTATAAATGAATCTGTTTGGCG 113565 46 100.0 30 .............................................. ACTAACGGATACCAATTACATCGATAATGT 113641 46 100.0 30 .............................................. GAGGTGCTTCGGATGAAAAACAATAATTAC 113717 46 100.0 30 .............................................. GAAGGAGATACATTCTTAATTGAAGATTTT 113793 46 100.0 30 .............................................. AAGCGCACAACTTGCAATAGGCGTGATTAG 113869 46 100.0 30 .............................................. TACGTTGCTGTTTTAATTCAACGCTTTCTT 113945 46 100.0 30 .............................................. CTTATAAAGGCGCAAGAGTGGTACAAGGTA 114021 46 100.0 30 .............................................. CAAATGGGACAGCGGATTTGTTTATGCACA 114097 46 100.0 30 .............................................. AAAATCAAAAATTGACAATCTAAATTTTAC 114173 46 100.0 30 .............................................. AAAGGTATGATTTAACTATTAACGATTTGG 114249 46 100.0 30 .............................................. ATAAATTAATAACTAAAGCCTTAATTGCTA 114325 46 100.0 30 .............................................. TTGTTTACCCCGCCCTCGGTGTTTTCAGTA 114401 46 100.0 30 .............................................. AAAGGTATGATTTAACAATTAACGACCTTG 114477 46 100.0 30 .............................................. TTCAAAATCTCCATGAAGTTTACAAGTAAT 114553 46 100.0 30 .............................................. CCAGTTGAAGACACTTTGTCTGTATCAACT 114629 46 100.0 29 .............................................. ATCCATTTTAATAGTATGTAACTGTTTTT 114704 46 100.0 30 .............................................. CTGACGGCAAACACGTGTTATAAGCAGGCT 114780 46 100.0 29 .............................................. AAAATTCAAATATAGAAAGAGCGATTTTT 114855 46 100.0 30 .............................................. AAAAATAAAAACATGATGCACGTTCGTGGA 114931 46 100.0 30 .............................................. AGAGCTTTTGCAAAATCTAGCAAGGCTATG 115007 46 100.0 30 .............................................. CACAAACAAATGAGGTTCCAACAAGTCTCG 115083 46 100.0 30 .............................................. TTCGGCACCCTTACTGAATACCAAAATGTA 115159 46 100.0 30 .............................................. ATAAAGAGCAAGTTCCAAGGATTGTTACAG 115235 46 100.0 30 .............................................. CAAAACTAATTTTCGACGGTATAAAAGAGC 115311 46 100.0 29 .............................................. TTCGAACTTTTTTTTGATATTTATTTGGT 115386 46 100.0 30 .............................................. ACATTTGTAATCTTAGAGGATTATTTAGAT 115462 46 100.0 30 .............................................. GCGTATGTTGTGTTTAGACTTTAAAACATA 115538 46 100.0 30 .............................................. ATATAGAGTAATCAATTATTATTCTATTGA 115614 46 100.0 29 .............................................. TTTACTTTGAGCTATTGCACTTGCTCGGG 115689 46 100.0 29 .............................................. ATCTTATGGAAAGAGATGAATTATTTGAA 115764 46 100.0 30 .............................................. CTAGTAAATAAAATAGCACGCAATAAAGCC 115840 46 100.0 30 .............................................. TCAAAGGGTTTTATATGCAAGAAGTATCTG 115916 46 100.0 30 .............................................. TTATTGGCGCCTATCCGTTTGATGGTTTAG 115992 46 100.0 30 .............................................. TATTTAGTTAGCTATAGCGGTACCATTCAT 116068 46 100.0 30 .............................................. CAAAACACTTATATCAAAAATAGTGAGTGC 116144 46 100.0 30 .............................................. AGATGTTTTAAAAGATATTTGTACATTAAC 116220 46 100.0 30 .............................................. TTGTGAATAAAAAGCCGATTTGCTAACAGC 116296 46 100.0 30 .............................................. TAGAGATAACATCACTAACACACCGTTACT 116372 46 100.0 30 .............................................. TATCTACAAATTATGAAAATACTGAGATGT 116448 46 100.0 29 .............................................. GAATATCATAAGATTCACAAAAATGTTTT 116523 46 100.0 30 .............................................. TTGTTTTCCACGTTAATGCCATTGCCCGAC 116599 46 100.0 30 .............................................. AAGCAGTTCTAATAATTGTTGAACAGGCAT 116675 46 100.0 30 .............................................. TTAATTGCTGTACATGAACTATATAAACAA 116751 46 100.0 30 .............................................. GTTAAAAACGCTTCAAAAAATGAAAACATA 116827 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 54 46 99.9 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ATAAAAATGGCATGTTTTGGTGGTTCTTCTAATGTTTTCAAAAAAGCATTAAATGCTGCAGATGATAACATGTGAACCTCATCGATAATATAAACTTTATATTGTCCCGTTTGTGGGGGGATACGAACTTGATCGATTAGATTACGAATATCATCGACCGAATTGTTTGAAGCCGCATCGAGTTCGAAAACATTGAAAGCAAAATCTTCGTTCGGGTCGTCGTAACCTGGTTGGTTTATTTTTCTGGCTAAAATTCTGGCACAAGTTGTTTTTCCTACGCCACGAGGACCAGTAAATAATAGGGCTGATGCCAAATGATTTGTTTCTATCGCATTTAGTAACGTATTGGTAATGGCTTGCTGCCCCACCACGTCTTTAAACGTTTGCGGACGATATTTACGAGCCGATACTACAAATTGTTCCATAAAAAAATATTCGAAAGCAAATATAATGGTAATAAGTGAAAATGCAAAAGTGAAAAGTGAAAAGTTTTAAAATGT # Right flank : ATGAAAAATTACTTAGATGATACAAATCAGGGCTCACGTAAAAAATATGGGGAGAAGTCTTAAATTTGGAAAAAAAACAAATGGATTTTTCAATATTTTCTTCCTTTTTACCTGAAGGATTATTATTTCATTTTGACATCGTTGATTTCAAGGAATTAGGTGATTTAGAAACAAAAAAAGATTGCTTTTATATCTATTTAGACGAGAAAAACATTCTCCCAAAAGAATATAGCGACATTGAATATGAATCAAAAGGGTTTTATGAACGAACCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //