Array 1 19803-20079 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLNT01000035.1 Hydrotalea flava isolate 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 19803 47 100.0 30 ............................................... ACCCCCATCCCGCATTGTTTCAGCGCCGAA 19880 47 100.0 30 ............................................... GTCGTGATCTAAACAGAAAAGTTACTATTA 19957 47 100.0 29 ............................................... AGACCTTTATGGCTCCCGTATAATTACCT 20033 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 100.0 30 GTTGTTATCAAAGATCTGATAAAAAGAATTTGAAAGCAAATCACAAC # Left flank : GATGACAGACTGTTCCCTTTATGCCCAGGCACAATAACACATCCGAACGTTTCAATGCCTATCGTATTATGTGGATAATGGTATTTTTCGATTTACCTACCGAAACCAAAACAGAGCGAAAAACGGCACAAGAATTCAGGAAGAAAATTATGGCCGATGGCTTTGTAATGTTTCAATTTTCCATATACCTGCGGCATTGCCCCAGCATGGAAAACGCCGCCGTGCATATAAAGCGGGTTAAAAAAATATTACCTGAAAAAGGGCATGTGGGCATTATGACCATTACCGACAAACAATTTGGGATGATGGAGCTATTTCAGGGTAAAAAAGAAGCGCCGGCACAACCCATACCCCAGCAATTAGAGTTATTTTAATGCAATATAACAAAAATAGAAAAGTAAAAAGGCTGCCCTGCCAACTGCAGGCACAGCCATTTCAATCATTTTTTTCTTTCTATTTTCTTTGAAAACCCTTACAGTCATTGTATTACAGCATTTACT # Right flank : TGAAATCCGTAGCCAAACTTTTTATCCGGGTTGTTATCATC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTATCAAAGATCTGATAAAAAGAATTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.00,-3.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 5273-3407 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLNT01000066.1 Hydrotalea flava isolate 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 5272 30 100.0 37 .............................. AGTTTTTCGTCACTCTCATTAAGCAATGGGTTAGTGC 5205 30 100.0 34 .............................. GAACATCAAGCCGGCACTAATGATGATGATACAG 5141 30 100.0 34 .............................. TAGCTAATGTTAAAAGAATCGGCTGCACTGGTTA 5077 30 100.0 36 .............................. ACATTTGAACCTATTGACCATTTTGTATTGTCGTTA 5011 30 100.0 35 .............................. ATAACAAAAGCACTCTAAAAGAAATGCGTGATGCC 4946 30 100.0 37 .............................. ACAATATATGCATGGGCAAAAACAGCTACAAAGCCGA 4879 30 100.0 35 .............................. CAGGTTACACTTTTGCAGAAATTATTGAATGATAG 4814 30 100.0 35 .............................. TTGCTTAATGAGAGCGCGTAAAAATTTGGGGTATT 4749 30 100.0 35 .............................. TCTAAAGGTGTGTATCCATTTGCTGCACCTTTATT 4684 30 100.0 36 .............................. GGTAAAACATTAGATGCAAAAATTATTCATGAACCA 4618 30 100.0 36 .............................. TGTTTTTATAGTTTCAGAAATTAACGGCAAAGAATA 4552 30 100.0 35 .............................. ACGATTAAAGCAGCTGCACCATTAATTGCCGGTGT 4487 30 100.0 34 .............................. TAAAAGCGACAGTTTACGTTGTCAGCGTTGTTTT 4423 30 100.0 36 .............................. TTGTTTAAAATTTATGGGTTAGTAAAAATTAAATAC 4357 30 100.0 36 .............................. TTGGTACTTCAAAAAATAGAAAATGTACACACACCT 4291 30 100.0 35 .............................. TATCAAGGAAACATTAATCAATCAATTAGCGCTGA 4226 30 100.0 35 .............................. TTCAATAACCTCATTTGCTGTTTCGGCATCTAAAA 4161 30 100.0 37 .............................. GTGTTATTAGATTTCGATAACGGTGTACATCGTATTA 4094 30 100.0 37 .............................. AAAATGAGTTTAAGCAGTTTACCGAAAGTAGATTTTC 4027 30 100.0 37 .............................. TCATTTACAACATCTAATACATCCTGCCACGTTTCAA 3960 30 100.0 35 .............................. CAATCAGGATTAGAGATATTAATAGATGATGAATT 3895 30 100.0 36 .............................. TAATATTGATTAAGGTTACAAAGTTGCGGACGGCTA 3829 30 100.0 35 .............................. TGCGTAATTACTGCACGATTTTTCATCGAACCAGC 3764 30 100.0 35 .............................. AACACTGTCGCCCTAAATTTATCATTCTTAATCTT 3699 30 100.0 36 .............................. TTGACCTCTGCGCATTTCAGTGCATCACATATCTGA 3633 30 100.0 35 .............................. CCGCTCTTCAACTCTGTAATTCTTTGATTTTAAAA 3568 30 100.0 36 .............................. ATCGCCGCCTCAAACAAATCATTTCACGCAAAGGCG 3502 30 100.0 36 .............................. TTTTTAATTAATAATGCTTTCGCAGGCAAATAAACT 3436 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 29 30 100.0 36 CTTTTAATCGTACCATATTGGAATTGAAAT # Left flank : AATTAAATATAAATTAATATAAAAAATGTATATTATTTTAGTATACGATATAGAGCAAAAACGGGTAGGTAAAATGTTAAAACTATGCAGAATATATTTAAACTGGATACAGAATAGTGTTTTTGAAGGGGAGATTACAGAGGTAAAACTAAAAGAACTGATAGTCAAAGCCAAAATAATGATGGATATTAAAACCGACAGTTTAATCATTTTTAAAAGCCGACAGGAAAAATGGTTAGAGAAACAGGTAATTGGTAAAGAAAAAAATGAGGTAGATAATTTTATTTAACATCGTCTACCACCCTGTATGTAGCTTTAAGGCAACTACAAAAACATGTAAGTTTTTATCATAAAATAGCACCAATCATACTTTCATCGCATCGTCGAACAAAGGCTGCAATAATATTATCACAGATCGACTACTTTTTAGTGCAAAAACCTTAGTTTTACCTTATTAAATTACATTGTAAATCAACTGTTTATCATTTGCTGATAAGCGG # Right flank : GCCGCAATAGCTCTATCATTCAATTGAAGTATACAAATACTTTGAGAGGACGTTTTAAAAAAGTACGGAAAACAGGAAATGGGTAGTACTGTTTTTTCCATACTACCCATCTGTATAGTGGAGATAAGAAAGTCCGAATTGGTATTATTTGAAATCTGTCGATTTTAGTCCTTTATTTACTTTTACATCTTTCACATCTAATTCAATTTTCAGTCTGCCCTGATCAACAATTGTTTTCATAGGCACCTGCAAACCGTTGTATGATTTATAATCATGATAAAAAGTTTGAATAACCATTTTTCCTGCAGGGCTACCATCTTTTTCAGTTACAGATTTTAATTTTAATCCGGTTTTTACATCATAGTAATTGGTAAAAGTTCTGCCCTTGGGCGATTTAATTTCAACAGCATAAGCATCATTGCCTTCAATGGATTCAATATCTTTTACTGTATAAGTATAACCATCTTTTGATAAATAATACGCTTCAGGCAGCATGGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACCATATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //