Array 1 120437-116383 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIPY01000035.1 Haematobacter massiliensis strain KC2145 KC2145_contig_35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 120436 29 100.0 32 ............................. AGCATAGTGGACGCCGTGAAACGGGCGCTGCA 120375 29 100.0 32 ............................. TCGTCGGCGGATTTCGACCTGACCGTTGTGCC 120314 29 100.0 32 ............................. GTTTCCAGATCTTCGGCGCCAAGGAACGCGAG 120253 29 100.0 32 ............................. ACGTCTCATATCCGGAACATCCTGACGGCAAG 120192 29 100.0 32 ............................. TAGGCCAGATCAACCAAGGCGCATCCGCCTCA 120131 29 100.0 32 ............................. GCGGTTCTTGTGCAGCTCCTCATGCGCCGCAA 120070 29 100.0 32 ............................. ACAGCCACGCCGCGAGTTTTCCGGAACCGTTC 120009 29 100.0 32 ............................. GCGAAACTGTCGGACTCCGAACTTATGCAGAA 119948 29 100.0 32 ............................. ACGCCCGAGGATATCACGATCCGCCGCAACAT 119887 29 100.0 32 ............................. GACTTATCGGCGCGGATGTTGACGCGATCTAC 119826 29 100.0 32 ............................. GCGGTGGCTGCGGCTGCGGTCACTCTGAAGCG 119765 29 96.6 32 ............................T GTTGATCTGCGGCCTGTTTGTTGCACGAAACC 119704 29 100.0 32 ............................. CGGGTAGCACACCCCATTCCGCATCATACCCG 119643 29 100.0 32 ............................. CCATGTCCCCGATCATCGCGGCGCTTGGCGGT 119582 29 100.0 32 ............................. CCAGTTCATAATGCCATCGCGTTCAGCGTACA 119521 29 100.0 32 ............................. TCACGCCTCGGTCGCGTCTCATCACCGCCTAT 119460 29 100.0 32 ............................. CCGCAGGTGCCTGAGAGTGGCGACGGCGGCGA 119399 29 100.0 31 ............................. GCATGGGTGCGCTGAGGAATAGGCGCGCTAC 119339 29 100.0 32 ............................. CGATATGCCCAGTTAGTTTAAGGGTGATAAAT 119278 29 100.0 32 ............................. GTCATACCTATGCCTTGCTGCCTCCCTCTTTA 119217 29 100.0 32 ............................. AAATTCACCAATAAGAACACCCCTTGACACCC 119156 29 100.0 32 ............................. GACCAGAGAAATTCGCCAAACCATTCACCAGG 119095 29 100.0 32 ............................. ATGGTGCACCGAATACGTCTATGGACGGATGG 119034 29 100.0 32 ............................. AGATTGGGGCTAAGGTGGGGGATGTGGTGGAG 118973 29 100.0 32 ............................. TCCAGCAGGACATTTGTAGCGAGTCAATGCGC 118912 29 100.0 32 ............................. GTGACAGGCCAGCGCTTCGATTGGCACCCCCG 118851 29 100.0 32 ............................. TATTACAAAACCCGTGATGGTCGGACGGTCGG 118790 29 100.0 32 ............................. CGTGCGATGCATAATTCAACGAAACGCAAACG 118729 29 100.0 32 ............................. GAAGTCCGGTTGACCATAGGTTTCGCGTTCAT 118668 29 100.0 32 ............................. CTCAGCGAACTGATCGAGGCGATGCAGCGCAC 118607 29 100.0 32 ............................. TTGCGTGATGCATCCCCGGATACCGGCGCTGA 118546 29 100.0 32 ............................. ATGCCGGCCCTTTTCGCCGCCTCTCCTTCGCG 118485 29 100.0 32 ............................. CATCGCATCGACAACCAACCCAGCGCGCTTGT 118424 29 100.0 32 ............................. CTCCCGGACCGGATAACAGTTTTCTGGTGGGC 118363 29 100.0 32 ............................. GACAAGCTGGCGCAGGTGCAGCTAATCGCACT 118302 29 100.0 32 ............................. GTGTCCACGCTCGTCTATAGTCGCCGGGTAGG 118241 29 100.0 32 ............................. TAATACTCTCACGCCGCGATGCAGCATCAATC 118180 29 100.0 32 ............................. GTGGACGTGCTGTTCTGCCCCCCGGATGCTCG 118119 29 100.0 32 ............................. GCTCCATCCCTCCACAGTTTCTCCACTACGGA 118058 29 100.0 32 ............................. ACACTAATGGATTCGATGTCGGCTACGTCTCG 117997 29 100.0 32 ............................. CGGACGTCAATTCGTCAATGGTGCATCTGGCA 117936 29 100.0 32 ............................. CATAACTCCGCTAAATTCTATGAAAATGGAGA 117875 29 100.0 32 ............................. GTCTGTTCTCCGCTGCGTATTTGGCATGAGTA 117814 29 100.0 32 ............................. CAGGGACTGGCAGAACGCCGTCCATATAGCGG 117753 29 100.0 32 ............................. CGATTTGCTGAATTCGTCGCTAATGACCCCAA 117692 29 100.0 32 ............................. CCAATCGTAGCATTTCCCGGAAAAGACCAGAT 117631 29 96.6 32 ............................A CGGTCGCAGACGCAGCCGCGCCGGTCCAGACC 117570 29 100.0 32 ............................. GCGCACCGCTGCCCGCCCGCCTGACGTGCCGC 117509 29 100.0 32 ............................. GCCCCGTCAGTCGTCTGGCGGGGCCGCCACGT 117448 29 100.0 32 ............................. TCAACGGTTTCCGGGACGAACGGTGGCTTCGG 117387 29 100.0 32 ............................. CGGAAATAGAGGCAGCCGAACTGGCTGCTAAA 117326 29 100.0 32 ............................. GCAACCCAATACCGGGTGAATGTCTGGGCGCT 117265 29 100.0 32 ............................. CGGCAGCAACGATCCGAAGATGCCGGATGGCT 117204 29 100.0 32 ............................. ACGTTGCCACCGGCTGGTTTTATACCACGCCC 117143 29 100.0 32 ............................. CTTTCGGCGGCGGGTCGGGAGAGGCTCTTCGC 117082 29 100.0 32 ............................. GCTTTCGACAGCTCGCTCGGGTCTTCGAGCCG 117021 29 100.0 32 ............................. AGTTGACTTTCCTGCGCCTTTCTCCCCAGTCA 116960 29 100.0 32 ............................. AACCCGAGCCGCTTCGGATAGCCGGGCACTTT 116899 29 96.6 32 ............................C GGCACGGTGGGCAGCGAGCCGGTGACGATCTC 116838 29 100.0 32 ............................. GCTCTCTTTAACACTAAGGGAGCTAGGTTGGC 116777 29 100.0 32 ............................. ACGGTCAGGCTTCCTCAACCAGATCAGCATCG 116716 29 100.0 32 ............................. GACCGCGTGTCAGCGGATCGGCGAAGAGCAGC 116655 29 100.0 32 ............................. GGCGCGCGCAACCGGGACTACCTGACTTCTGA 116594 29 100.0 32 ............................. CAGTCATCAGTTGGCGGAGAACAGGCGGATGG 116533 29 100.0 32 ............................. AACGCCAACTACACGGGTGGTGGTCTGAACAC 116472 29 100.0 32 ............................. GTGCGCGCCGGTGAGAGGGCGCTGTTTCGGGA 116411 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 67 29 99.8 32 CCGTTCCCCGCTCGCGCGGGGATGAACCG # Left flank : CTCCTGTCGAAGATCATCCCCGGCATCGAGGCCGTGCTCGAGGCGGGCGAACTTCCCCGCCCCGATCCGCCACCGGAGGCGCTCGGCCCCGCCTTTCCCGACCAGGCCTCCGGTGATGAGGGCCACCGCGGATGATGGTGGTGGTGGTGACAAACGCCCCGCCGCGGCTGAGAGGGCGGCTCGCCGCCTGGTTGCTGGAGGTGCGCGCCGGGGTCTATGTCGGCGACTATTCCGCCCGGACGCGCGAGATGATCTGGGGCCAGGTCATCTCCTATATCGACGAAGGCGATGCGGTGATGGTCTGGCGCGCACAGACCGACCAGGGTTTCGACTTCCTGACAACGGGCCGGAACCGGCGGATGCCGGTGGATTTCGACGGGCTGAAGCTGGTGAGCTTTCGCCCGCGTGATACCGAAAGCTGAGCGGCGAAAGAGGCCTTAGGCATCGGTGCGTTCTTTGACAATCGAATAGTTTTGATGAATCAAATGTCTGCAGGAAGA # Right flank : CTGGGGACGTCGTCGTTCCGAAGGGATATGCGGTGGCGCCTGTCGATTTCGAAAAGGATCAGACGGTGAAGGTCACCCCTTGCTGACCGGGCTCTTTATCCAAAAGCAGAATTATACGGTGGGTCTGGCCAGGGTGGCGTCGGACGAGGCGTATTCCTGCCAGCTGGGGTCATGCTGGGCCTCACTCTGCTAATTCTGGGGAGGACGTAGTGCAGAATTCGCGATCTTGGGAAGCCGTTCAGCCAACCCCTATGCAGCTTGGGCAAGGCGCGCGTCGCGGCTGTCGGTTACGATTCCGCTACCTCGGGGAGACGTCCCGCAGGTACCGCCCATTAGGTCTAGAAGCTTCCGAACCACGTTCCCAGCAGGATCACGGCGATCAGAGCCAGCAATGCGCCAATGACCGCGACCATGACGACATCGCGATAGCTCTGCCGGGCTGTGACGCCGCAGACCGACAGCAGCGTTACCACAGCGCCGCTATGAGGGAGGCTGTCGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCTCGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //