Array 1 1505766-1503090 **** Predicted by CRISPRDetect 2.4 *** >NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1505765 30 100.0 36 .............................. AAGGGAGGGTTAAAATGGCAAGGTATAAGATTGTGG 1505699 30 100.0 36 .............................. ACTTTTTATAAATGCTTTTGTATAATTCTAATTCTC 1505633 30 100.0 38 .............................. CTGGGATGCAGTGGCTAATCAATATAGAAGATGGCCGA 1505565 30 100.0 35 .............................. TACATCTATGCCACCGCCTTATATTTGCGGTATAG 1505500 30 100.0 35 .............................. TAGCTCGTCTGACATAAACCTCAAAAAGCTTATAA 1505435 30 100.0 36 .............................. TAAAATGCTCTTTCTTGAGCATTCCACACATTTATA 1505369 30 100.0 37 .............................. ACGAATTTATCTATGTATATTTCAATTTCATCATCTT 1505302 30 100.0 37 .............................. CATGAAGCTGTTACTGTAGCTGTTCCTGATGTTGTTG 1505235 30 100.0 37 .............................. TTGTTTTCTTCTTCTTCAATAGCCTTAATTATCCTAA 1505168 30 100.0 36 .............................. CACAGTACAGTTCCGTACAGTACCTTGGCTCAACAA 1505102 30 100.0 36 .............................. CTGGATAGGAGACTATATAAGAGGGGAGGCTAAATA 1505036 30 100.0 36 .............................. TCTGCAAGCTTTTTAATGGCTTTAAATATATTTTTG 1504970 30 100.0 34 .............................. CTAGCTAGAAGGAAAGAAGAACAAAGGAAAATTG 1504906 30 100.0 35 .............................. TTTTTTTGCTCCTGTGACCGCCATATAGTGCATAC 1504841 30 100.0 35 .............................. CATCATTCCCCACCATTGACATTTCGTCTACAATA 1504776 30 100.0 37 .............................. ATGGGTATGGTATTTTACAACTAACACTTGATGCCGA 1504709 30 100.0 38 .............................. GTAATATGGAAGTTTGCCGAGGCTTTTAAAGATAATAC 1504641 30 100.0 36 .............................. TACACACACTGTCAGATGAATTAAAAAACAAAATTG 1504575 30 100.0 36 .............................. TTTTTATCTGAGATAAGCAGAGAAAAACTAAACAGA 1504509 30 100.0 37 .............................. CATCGTCTATGTAGGCGAATCCGTCTTCGCCTACCAA 1504442 30 100.0 37 .............................. TATATGCATATATTCTTATATTCTTTACTCTTTTATT 1504375 30 100.0 36 .............................. AAGGCATAAAAAAAGAGGCCCCGAAGGGCCATACAA 1504309 30 100.0 36 .............................. TATATATGAAGTCTGTCATATTTATCCCACCCTTGA 1504243 30 100.0 38 .............................. ACTCCAATATACTTTTCTTTCTTCCCTTTTATTCCATC 1504175 30 100.0 36 .............................. TGCGACTAGTAAAAGATGAAGATTTAAGGGAATTTG 1504109 30 100.0 36 .............................. ATATGACATTTGGTGCTATAATGAAGCCAGCTTTCG 1504043 30 100.0 36 .............................. ATGGTGTTATTTCTGGCGTTGGTTCTGCTATAACGT 1503977 30 100.0 35 .............................. GATATATCGTCCTTTAGTTGTAGTAGCATTTCGTA 1503912 30 100.0 36 .............................. AACTTTGGGCGCTATCGTAAAAGACATCGTCACACA 1503846 30 100.0 36 .............................. AGTTTGGCATCCACTTGTCCGCATCTTTGCCGGGAC 1503780 30 100.0 35 .............................. TTCTCACGTATGACAAACTTTCTTCCTGCCTGTGC 1503715 30 100.0 36 .............................. ACAAATTTCCTCAAAAGATAATATATGGCTAACAGA 1503649 30 100.0 36 .............................. TCATGAACATAAAATAAAAAGGGCTTGCTAGCCCTC 1503583 30 100.0 36 .............................. AAGGGATAATGCTTGGTTTATCTGTAATTTCAATGT 1503517 30 100.0 36 .............................. AATGCAACTTTGTAGAATTTGTCACGATATTTTTGC 1503451 30 100.0 36 .............................. ATGCACTTGCGATAGGTATAACATTACCAATGCTTG 1503385 30 100.0 36 .............................. ATATAGGAGGGGTGGTGGAAGATGTTTGATTTAAAA 1503319 30 100.0 37 .............................. ATGTACCCACTTGAAGTTTACGCAATTGAGGATGGTA 1503252 30 100.0 37 .............................. CTGTAATCCACAAAAGCTAAAAATTCTTTTTGCTCAA 1503185 30 100.0 36 .............................. CAGGGCCTTTACTTCACAAAACACAACTTAACCATT 1503119 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 41 30 100.0 36 GTTTTTAGCCTACCTATAAGGAATTGAAAG # Left flank : ATAGGTGCAGCTTTTAACAAAGTAGTAAATTCATTAGTTGTGGATGTTTTAACTCCACTGATTGGAGCAATATTTGGAGCTCCTGATTTTTCTGCCCTTAAATTAGGACCAATAGCCATAGGTAATTTCCTTAATGCTGTTGTTAACTTTATTATCGTATCTGCAGCCATATATTTTTTCATAGTAGCTCCTATGAATGCTATTAGACAGCGAAAAGCAAAAGAAAAAGAACAAACACCACCTGAACCATCAGAGGAAGTAAAACTTTTAAGAGAAATATTAGAGGTATTAAAGGAAAAGTAAGGTAAGAATATTGATTAATATAAATTTGTCGTCGACCTAAGATAATGCAAAAAATGTTGAGGATCGACGACAAATTATTTTTTCAATTTTAGAAAATAGTTGATTTTGTCAAACAATATGGTATAATAAAGTTAAAATACTTGACAGATAAGATGAAAAAAGAAAAATTTGTTCTTTATTATATTTGATTATAATGG # Right flank : ATGTCGTTCTCCTGATACTTGTCTTCTACTCCTAACATGTTTTTAGCCTACCTATCCTGAAAATAGTGTCTCTCAAAAAGGCAACAAAAAACTAAACCCATACCGATGTAAAAATATGGGATAAATGAATGGTTAATAAAGTTAAATTAAAAGTTAAGACACTGCAGATTCGACCGTGACCTTAAGGCCTAAAGACTCTAGCTTTTTTAAAGATTGACGAATAATCATATTACGCTTTTTCTCTTCATAATAAGTAGGACCTAATTCAATATATGGTTGCTTTTGCTTGAGAATATGATAAACTATAATTAAAATGCTATGTGCCACTGCAACTGCTGCACGGTTTGCTCCTCTTCGAGCAGCGATGCGGTGGTACTGACTTGAGAGATAAGTATCTTTTGCCCTTGAGGCAGCTCTGGCAGCTTCAATAAGAGAGCTTCGCAATTTTTGGTTACCTTTTCGAGTTCTTGCAGACTTTTGTTTACCAGCACTTTCATTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATAAGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2679132-2673465 **** Predicted by CRISPRDetect 2.4 *** >NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2679131 30 100.0 36 .............................. ACCTACTAAGCTGTCTAATTATCATCCAATTTTGTT 2679065 30 100.0 35 .............................. ATGTGAACTATTTCAAAACCGTTTGGTGTTCTCTG 2679000 30 100.0 37 .............................. CCTTTCTAATTTGCTTACCCCATTTTAACGCTTCCTC 2678933 30 100.0 34 .............................. AACCACTTGCTATTGCAAGCATGATGCCTTCAAG 2678869 30 100.0 35 .............................. ATGTTTCAAAAAAATCCTTCTCCTTTTTGTAAAAA 2678804 30 100.0 37 .............................. CCTTACGTCACAACACAACACAAAGCCTTAACAGTAC 2678737 30 100.0 36 .............................. TCCCTTGTGATACCCAGTTTCGTAAAACACCTTCGA 2678671 30 100.0 35 .............................. CTTTTAGAGAGGGTTCTTTTTTGTCTGTTTCTATT 2678606 30 100.0 35 .............................. CCAACTTCACTGCTGCCTTTTACATTGCCTGTAGA 2678541 30 100.0 36 .............................. CAATAAAACTAATTTACTCTCATCGTATATAAAACT 2678475 30 100.0 37 .............................. CAGTGCCAGCACTATATGGCGGTTACCGGCTTTCCTC 2678408 30 100.0 36 .............................. TAAACACTATGATATGGAACATCAAAAACGAATATA 2678342 30 100.0 36 .............................. AAATTTGGAAAACATCGGACAGCTCTCTGCGTTGTG 2678276 30 100.0 35 .............................. ACATGTGGAGCTGCCCGCGTACTATGGATGAAACA 2678211 30 100.0 38 .............................. ATTTTTATTTTTTTATTTTCTTCTTTCAATTGTGATTA 2678143 30 100.0 37 .............................. ATTGATTTTAACGATAAAGACAACACAATATATTTAA 2678076 30 100.0 36 .............................. GTCCTAAAAAAGTAGTGTTTAACTATGGTAATCATA 2678010 30 100.0 36 .............................. ATTGTGTTATCTGTCTGTCTGTCAAGCTTTTGCCAT 2677944 30 100.0 35 .............................. GTGAGTCGTGTGTCGTCAGTTTTATCTGACGACAA 2677879 30 100.0 38 .............................. GCAAATATAGATAGATGGGTAGTTGGCGAAAATGCAGG 2677811 30 100.0 35 .............................. GAGTATAAAATAATTTTCTCTTGCGTATGCTATAA 2677746 30 100.0 37 .............................. ATTTTATGAATTGTATATACAATTATAATTAGTACAG 2677679 30 100.0 37 .............................. ATGCAAAGAGATTAACGATGTAGAATGGTATTTTACC 2677612 30 100.0 37 .............................. CTTTACTTTGTGGGTTTTTTGCGTTCATAATGTTTGC 2677545 30 100.0 36 .............................. ATGCCACCTTCTGCCCTCCACCTGTCCAGTATGGCC 2677479 30 100.0 36 .............................. TAAAAAAATACTATGAAAAGGATGAACCTGTAGATT 2677413 30 100.0 35 .............................. TTTCTGGTTCCCTCTCTTGTGGATTTTCTATGCTG 2677348 30 100.0 35 .............................. TCCTTGTGCTTATGTGTGGTATTTTGATTCGACTG 2677283 30 100.0 38 .............................. CTATTGTAAAATTTTGGTAATGTAAGATAAAAAAATAA 2677215 30 100.0 37 .............................. GATATAAAGATGTTTTTATAACGGCAACACGTGGTAC 2677148 30 100.0 37 .............................. AAAGAAAAAGATATTACATTAAAAATTGCACTTAAAG 2677081 30 100.0 38 .............................. ATACAACAAATTAAAGAAGGACTAAACTTCAAATTAAA 2677013 30 100.0 37 .............................. CATCTAAGTGTTAGCTGGCGGAGTGTGAAAGTTGGGA 2676946 30 100.0 35 .............................. ATTTTTTTCTTTGTTGATTATATTTTATCACTATT 2676881 30 100.0 37 .............................. ATCTACCAGCGCCACAGGTGCAGAAACAGGCAGCGCC 2676814 30 100.0 36 .............................. AAGTTTTATCGAGAAGCGCTGAAACTTCTCCCCATG 2676748 30 100.0 37 .............................. TATAGTTCAATTGATGATTGTATAAGCGACTTAATGC 2676681 30 100.0 36 .............................. CAATCCTGGAGAAATTCTCTCCAAGATTGTTTTTTT 2676615 30 100.0 36 .............................. GATAAACCAGTAAAAATAGGATTCGAAGGTAATACA 2676549 30 96.7 38 ....................A......... TTTATAACATTGTATGAATATACTGTACCAACGCTTAA 2676481 30 100.0 34 .............................. AAGACATGAAAAGCTTTGTTTAGTACTAGCACAG 2676417 30 100.0 36 .............................. CTCCTACTTTGTTTATGCAAAAGCATATGGCATTTA 2676351 30 100.0 36 .............................. ATCTACCAGCGCCACAGGTGCAGAAACAGGCAGCGC 2676285 30 100.0 37 .............................. CTGCATCTTTTTCATTTTCAGCTTCCACTGTAAATGT 2676218 30 100.0 36 .............................. AGTGCTTCAGAACTAGCTTCGCTTCCGTCCATTTCA 2676152 30 100.0 37 .............................. ATTTCAAAACGTCTATAAGTTGTTAATTTAGCGTATT 2676085 30 100.0 38 .............................. TTGGATGCCACCCCCAAAAAGTTTCATTGAAAATCGGG 2676017 30 100.0 36 .............................. AACATAATGGTGTTCAAAAAATTGCAAGGGTAACAT 2675951 30 100.0 36 .............................. AGTTACCCCTCCTTTGGAAGGTCATAGTAAAATACT 2675885 30 100.0 37 .............................. AGTGATGAATCCAAACTAGCTTTAGCTAATGCTATTC 2675818 30 100.0 36 .............................. TACAATTCAATTGAAGATTGTATAAGTGACTTGCTG 2675752 30 100.0 35 .............................. TTTCGTCTCTTGTGATTGTATACACAAAGCTGTTT 2675687 30 100.0 37 .............................. TTCTTGATGTATATTTTCCCTGACTGTCCTAAAGGAA 2675620 30 100.0 38 .............................. GGGTATGCAGCACCTAATACCCCTAAAATTTGTATTAC 2675552 30 100.0 36 .............................. TGCTAACGATTAATTTGGTGGTGATGAAAAAATGAA 2675486 30 100.0 36 .............................. TACCATGAAAAATTTGAAGATGAGATGGGAAAATTT 2675420 30 100.0 36 .............................. TGTCTTGTCCACCTTGATTTTGCTGCCTTCCGGGCT 2675354 30 100.0 36 .............................. GATACCCCGAGGCATTCTGCGTAATCAACGGTGTAT 2675288 30 100.0 38 .............................. AACATTTTAGCGATTTTAGCAATTGTATGATACTTTTA 2675220 30 100.0 37 .............................. TAGCAGAACAGGAAAAGAAAATAAAAGAGTTAGAACC 2675153 30 100.0 35 .............................. CTGTACCTTTCAGCATGCTTTGTAATTTCTTCAAC 2675088 30 100.0 37 .............................. TATTCTTAGAGCAGGAATAAATCCTGCTTTTTATTTT 2675021 30 100.0 39 .............................. ACAAAAAACAAGCTCTCTGATGAAGAGATAAATGTACTT 2674952 30 100.0 38 .............................. ATGTATATATGTGTTGTTCCGTCCGGTTTTGTGTATTT 2674884 30 100.0 36 .............................. CTGTGAAAAAGAATATACATGCAAGAGTGAAGCACC 2674818 30 100.0 36 .............................. AATGTAAATTGTGGATTTAAACCTGTACGATTCAGC 2674752 30 100.0 36 .............................. TACAATTTAAGATTTAAAAAATAAAAGAGGATTTTT 2674686 30 100.0 37 .............................. CCTCTAAATAATACTCCGAGGGATAAAAGTCGCCTCC 2674619 30 100.0 36 .............................. TCTTTTGTATAGAAATAATATTCAGCATCTGAGGAT 2674553 30 100.0 36 .............................. TGCTATTGCAACGTCTATTGTGAAAAAAGAAAGGAG 2674487 30 100.0 37 .............................. TATATAAAGGAGGAGACTGATTTAATTATATAATTAA 2674420 30 100.0 35 .............................. GACGGCACGTATGCTCTTGCACCTTCTACAGCAGA 2674355 30 100.0 36 .............................. TTTCGTCTTTAGCATCTTTATATTCTGCTACAGTGT 2674289 30 100.0 35 .............................. AAAAATTAATTATTACAGAAGATGGGACGCTAAAA 2674224 30 100.0 38 .............................. ACAGTTTTTGTTGATGTATAAGTAAATGTTTGTGTTGT 2674156 30 100.0 36 .............................. AAGAAATCATTGTTGTTGATTATTTCTTCAAGCTGT 2674090 30 100.0 38 .............................. ATTGATTCCTGTTCGTTCTCTATTGCACAGAATAAACA 2674022 30 100.0 36 .............................. TATGTTTAGATACTGGGCTGGTATTCTACAAGCAAA 2673956 30 100.0 36 .............................. AGGTATGAAGGCCCTTCTACACGCACTATGCCGTCT 2673890 30 100.0 35 .............................. CGGGGATAGCGGTGCTAAATGGTGCGATGGGCGGG 2673825 30 100.0 36 .............................. TAACAGCTGCGACCTATTATGCTTGGGGAGCAGATA 2673759 30 100.0 37 .............................. GTATCGACTTTGAAAATGGTATGGCAAAGGTTGCTAC 2673692 30 100.0 36 .............................. GAAAATGACAGGCTTGGGGTGATGGGCGGATGAAGA 2673626 30 100.0 36 .............................. TTTTTTATCTTGCTAATTATATTCTATTACTATTAT 2673560 30 100.0 36 .............................. AACTTAAAATTGTATTACTATTGTAAAATCCTGAGA 2673494 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 86 30 100.0 36 GTTTTTAGCCTACCTATAAGGAATTGAAAC # Left flank : ATGCCATAGATAGTTTTTCTTTAATAGAAAACAATCCAGGGTATTTTGAAGCTTTCTTTATATATGACGATGTAGCAGAAGACATTTTTAAAAAATATTTAAAACTGTCAAATATTAAGGATTTTAATGCTAGAAGAGAGGCATATTTAGAAATTCAGAAAAATATAAAAGATTATATACTTTCTCTTCCCAAAAAATATATTAATAATTTTCAACTGGATAAAGGTATTCCTTACTTACCTAAAGAAGGTATAAAGGACATATATGATTTTAAAACAGGATTTAAAAGAGATATAGATGATAAATATATGATATTTTAAATAAATGTCGTCGATGTCCAATAGTGCAAAAACGCCTGGAGATCGACGACATTTTTATTTTTCTGATTTTCATAAAGTAATTGATTTTATTGGACAATATGTTATAATAAAGTCAAGATACTTGACAGAAATTAAAAAATTGTAAGGTGTATAATGTGCTATTTATGCATGTTATAATAA # Right flank : CAAGGTAATGATACGGGAATTCCTGGAGCAATACTGCGTTTTTAGCCTACCTATCCTGAAAATAGTGTCTCTCAAAAAGGCAACAAAAAACTAAACCCATACCGATGTAAAAATATGGGATAAATAAATGGTTAATAAAGTTAAATTAAAAGTTAAGACACTGCAGATTCGACCGTGACCTTAAGGCCTAAAGACTCTAGCTTTTTTACAGATTGACGAATAATCATATTACGCTTTTTCTCTTCATAATAAGTAGGACCTAATTCAATATATGGTTGCTTTCGCTTGAGAATATGATAAACTATAATTAAAATGCTATGTGCCACTGCAACTGCTGCTCGGTTTGCTCCTCTTCGAGCAGCGATGCGGTGGTACTGACTTGAGAGATAAGTATCTTTTGCCCTTGAGGCAGCCCTGGCAGCTTCAATAAGAGAGCTTCGCAATTTTTGGTTACCTTTTCGAGTTCTGGCAGACTTTTGTTTACCAGCACTTTCATTATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //