Array 1 114206-115131 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFIR01000007.1 Eubacterium sp. An3 An3_contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =========================================================================== ================== 114206 32 100.0 34 ................................ AAATATTGTGCGTCAATAATCTGTGCTGTGACAT 114272 32 100.0 34 ................................ GGGGCTTAACCGGTTAGGCGACTCAACCAGATCA 114338 32 100.0 34 ................................ GGCATTATCAAGGTTGGTTTCAAAGGTGTGTCTT 114404 32 100.0 34 ................................ CGAAAATTGCATGGAGCATATGCACGACACCGAA 114470 32 100.0 34 ................................ GCCGATGTGTGCCGGCAGCTGAGCCAGAAAGATT 114536 32 100.0 34 ................................ ACACCTCAGCAGGCTACCTGGTGGATAGGTGGCA 114602 32 100.0 33 ................................ TTCAATAATAAAGAGTATGAATTTAATGGCCGG 114667 32 100.0 32 ................................ CGTAACGCAGCCGTATCCGTTTGGATTGCGTT 114731 32 100.0 33 ................................ GGCTTAGATGTCTATGGGGTTATGGAGAATATC 114796 32 100.0 34 ................................ TTCAAAATATACTTTCATTTCTTCTCCTCCAGTC 114862 32 96.9 34 ..........................A..... CTTGAACCGCTGTGCCAGAAGATCCGCCACATTA 114928 32 93.8 33 ..........G...............A..... CATCCAGGAGCTGCCAGCACATTCAGTACAGCA 114993 32 93.8 75 ..........G.G................... ATAATTCCGGCTGCCGTTTTTGGCAGATGTGTGGGTTGAAATTGGCGTCTTCGACTCCCTCATCCATGTGAACTG 115100 32 75.0 0 C.........CC........A.A...A.CT.. | ========== ====== ====== ====== ================================ =========================================================================== ================== 14 32 97.1 37 GTCACATCTCATAGAGATGTGTGAGTTGAAAT # Left flank : CTAATGTACTTCACTGTGAAAATCCTCTGAAGATTGAAGCTGAATGGATTGATGAGTACAAACTGAAAAAAGGCAATTATGATATAACAGATGTTGACCCAGAATTAGTGGATGAAATCCCATCAGAAACACAGATAGGAAAGGTATATACACGGCTGATCTTGTCAACGCTTCAGCCGGACGAAGATTATATAGACGGAATGATCCGTGTATATAATGATGCGATATGCAATACGATAGATAATTACAACAGCAGTGCATATTATGAACCATCTTATGTGATTACAAGAGCTTATAATAACGGAGGATTTTAAACAGGCAGAAAACGCATTTGAATACGTTATGGCGAACCTGTAATGATGCTTTTTTCTCTAAGGCTTTCGCCGAAAAAATTAATCTTTTTGCAATTATTTTAGAAACTTTGGTGATTAATTTAACAATATTTTGCTTGCTATTCGAATATTTTGTAGTTTGAAAATTATCTCTCACCATATATAGCG # Right flank : TGAACTACAAGTAACCAAACTTCCTGCTTAACCGAGTAATTACTCCTCTCGCCTCTCTCCACCCCTCCTGTCATTTTCAATAAAAAAATAAAAATAAAATGTATTTACATAGACAATCTGCATGAAAACGTGTTATGATATACGATAATAAGCAGTTTTGTTCTAATATATTTATATTTTGATAAATGTATCAGAACTTTTGTATCATTGTATCGCATTTTGTGAAGCAAGTGCAGAAAGTGACAGGGATGAAGGAAATATGTCAGAGGATAGCAAACAGATTTCTTCGAAGGAATATATTGCTCATATCAATGAGTACAGTGGACAGGTACAGTCGGTGAAGGAACACAGCGAGAATACCGCAAGGCTTTGTCGGGAGTTTTCTGTTGCGGAGCTGGAAGATTTTATGTATGCGCTGGGGCTGCAGCATGATATCGGAAAGTACCAGCAATCTTTTCAGAAGAGAATCCGGGGAGCAAGTGTGAGAGTAGAACACTCGG # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACATCTCATAGAGATGTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 123342-124241 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFIR01000007.1 Eubacterium sp. An3 An3_contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 123342 33 100.0 35 ................................. TTGAGTCAGGTTTACGCAGAGGTTCCATGGTTGTT 123410 33 100.0 32 ................................. ATAAGTATCCAACCATTTTATATATGCGCCGT 123475 33 100.0 33 ................................. TGATTTATGGTTTTAATAAAGGTCATGCTACAG 123541 33 100.0 33 ................................. AAGCGAAAGTATGAAAGACAAAGCGACAGTAAT 123607 33 100.0 34 ................................. TGAGGGTAAGCCGGTTACCAACGACCACCCGCCT 123674 33 100.0 34 ................................. GTGGCTAATAGATGGGTAACATTTAGCGGCACGG 123741 33 100.0 35 ................................. CGATGTGGGCGTGGTAATTTCAAAAATTGCCGAAG 123809 33 100.0 35 ................................. TCATTGTTCCTTCAAAAAGTGTGTTACATGTTAAA 123877 33 100.0 33 ................................. ATTTATGACGGCGTGGAAGTTGACAGCAGCGGT 123943 33 100.0 34 ................................. GAAAATACCATAAAATACAATTGTAAACACTACC 124010 33 100.0 33 ................................. AAAGGATGCCATGGCCGCCTCAGAAAAAACCTC 124076 33 100.0 34 ................................. AGAAAGAGACAGATTTTGCACGGTTCCAGTGGAT 124143 33 100.0 34 ................................. AGCATACAGGCGATCGATTTCCCGAATCTGTTCC 124210 32 93.9 0 .....................-..........C | ========== ====== ====== ====== ================================= =================================== ================== 14 33 99.6 34 GTCATGCCCCGCGAGGGGCATGGGAGTAGAAAT # Left flank : TATTGTCCGATCAAATAATTGAAAATGAGAAGGCAGGTGAGAAATATGATGGTTTTAATCTGTTACGATGTGAACACAGCTACTGCATCCGGGCGAAAACGCCTGCGAAAAGTGGCGAAAGAATGTCAAAACCACGCACAGCGCGTACAGAACTCCGTCTTTGAAGCTGACCTGGACTATTCTTCCTTTATGAAACTAAAAGACAGACTGGAAAAACTGATAGACAAAGAAGTGGACAGCCTGCGTTTCTATTACTTGGGCAACAACTGGAAACGCCGCGTCGAACACATCGGAGCAAAGGAAACCTACGACCCAGAAGGCGTAATCATCATTTGAACCCTCCGGCGAACCTGTGGTAATATAAAAAACACCGGCAGGTTCGCCGAAAAATTGAGATGAAAACGGTGTATTATGATTCGGTTTCGTCTCGAAATATCAAAAATTAAAGTCTGCCCCTCCATATTTGGTGGCGTGACTGCTTCTGTTCACTAAATGTAGCT # Right flank : CTATAAATGTAAAAAGAGATAAACACGTATATACATATTATGAATCGGTCCGAGACAGTAAAAATCTCCTATTGTGAAGAAAATTTCTAAGAACAGCGGTTTCTCCGAAGAGTACATATAGAAATTGTTTGACTATGTGTTTATAAATGAATATGATTTGTACGGAGGAAAGAAACGATTTGAACCAGATTATGATATAGCAGAATCAATAGTTGCGAGAAGGCAAAGATATACGGGAACACGACATGATTCTTCTTAAACATGAACATTTGGAATATGGTTTAATGAATAAGCTAGAAATTCCATATGATAAAGCTCATGATTTGGCTCAAAGCAAATATGATTACGCTGCTGCATTGAATTATTTTAAAAAGAAAAATAATTTATAGAAAGGAAGTGAGTGCGTGGTAAAAATTGAGAAGATGGAATTAACGGATCAGATGGTCAGATATAGATATTTTCCGGAAAAATCAAAAAAGAGCGGCATTGTAGCATTGAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATGCCCCGCGAGGGGCATGGGAGTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCATGCCCCGCGAGGGGCATGGGAGTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.40,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //