Array 1 83696-89036 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCB010000007.1 Ideonella sp. B7 NODE_3_length_606669_cov_410.158710, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 83696 29 100.0 32 ............................. GCGGTCTGCTTCGAGGCGACGCCGTTCACCGT 83757 29 100.0 32 ............................. TCGCGGGGGTCTATTTGGTCAGCCATGTCAGA 83818 29 100.0 32 ............................. TCACCGCGTGTCTATCGGTTCGTGGAAGAGTA 83879 29 100.0 32 ............................. GCGAACGACCCGAAATTGTCGTTCGCTTCCGA 83940 29 100.0 32 ............................. ATGTTCTCGTTGCGGTCCTCGGCCACCTCCAC 84001 29 100.0 32 ............................. TCCTCGAACAGTGAGCATTGGGGAGTTCTCCA 84062 29 100.0 32 ............................. TCACCGGCATGGTCACTGCCAGCAACCTGGCC 84123 29 100.0 32 ............................. GTTGTCGGCGCTGTTGCTTCCGCCCTGCGCAA 84184 29 100.0 32 ............................. ATCAGCGAGATCGTGGAGTTCGAGGCGGCCGA 84245 29 100.0 32 ............................. CAGCAACTGGCAATCTCGATTCGCAACATGGC 84306 29 100.0 32 ............................. CGCTTCCATGCGTTGATCCAGCCGCCGAAACC 84367 29 100.0 32 ............................. ATCGTCGGCGATGTGGTGTCACACTATCGCCG 84428 29 100.0 32 ............................. TTCGGGTCCGTGCGCGACGGCGACCAGTACGG 84489 29 100.0 32 ............................. ACTGCAGCGATGTTGCGCACGTAGATGCGGGC 84550 29 100.0 32 ............................. GTAGACCCGAAAGTCCTTCGAAATTGCCGTTC 84611 29 100.0 32 ............................. CCTCCCTTCGCGCATGGCAGCTCGGCCAGAGA 84672 29 100.0 31 ............................. CCTGTCCCGTGTGAGGTGCTGCGGCCCGACG 84732 29 100.0 33 ............................. CGCATCACGCCCGAGCTGGAGCGCTACGGCCTG 84794 29 100.0 32 ............................. ACCTATCAGTTCGCCTTCGAGAACGTCAACCG 84855 29 100.0 32 ............................. CCGTTGCGCTCGGACTTCTGGGCCTGGACGGG 84916 29 100.0 32 ............................. GAACTCGCCGCGCGCTGGGGCGACATGACGAA 84977 29 100.0 32 ............................. CACGCGCAGACGGCGCAGTTCTTCTTGCGCGA 85038 29 100.0 32 ............................. GTCGTGTCCGATGCGATTGACGGCAGCTTGCG 85099 29 100.0 32 ............................. TGCCTGCGCCGGCATTTGGCCCGGCAAGCCTT 85160 29 100.0 32 ............................. CGTAGTAGTCCGGCGTGCCCCAGCAGAGCGAG 85221 29 100.0 32 ............................. GCGGTGCACGAGCTGCATTGCCTGCCGACGAT 85282 29 100.0 32 ............................. CCGACACCGATGACGAAGACGATGCCTCGTAC 85343 29 100.0 32 ............................. TTGGCGCCACTCTCGGCCATGCAGTTGCGCGA 85404 29 100.0 32 ............................. GACTGGTGGGCACGCCGAGCGCAACCCGCAGC 85465 29 100.0 32 ............................. GCCGATGTTTCAGGCCATCCGCCGATGGTGAA 85526 29 100.0 32 ............................. GCCACAACGGCGGCGGCGGCCATGCTCACGAG 85587 29 100.0 32 ............................. CAGGAGGGCGTGCCGGGGCGCGCGCCCCAGGG 85648 29 100.0 32 ............................. TAAGCGTGACAGCGGTACAGCGAAATCCGGCG 85709 29 100.0 32 ............................. CCGGGATGGTTTGCAGGAATTGCAGTTCTTCG 85770 29 100.0 32 ............................. ACCAGCGCATCAAGAGCCATGTGCGGCTGCAG 85831 29 100.0 32 ............................. CCGATGAAGTTGCGTTGAATGTCAAGCGACAG 85892 29 100.0 32 ............................. GCGAATCCTGAGCCCGAGGTGGCTCCGCATCC 85953 29 100.0 32 ............................. TGCACCTGATCTCTACCCAGAGAAAAGATGGG 86014 29 100.0 32 ............................. CGCGCGGCACTTGGCCAGTGGGTTAGCGGCAT 86075 29 100.0 32 ............................. CCTCAGTTTTCCGTGGGTCGTCGCGCCAGTGG 86136 29 100.0 32 ............................. AACAGTGGCTCGCTGCTGCGCGTGAGATTCAG 86197 29 100.0 32 ............................. CCTTCCGCCAAAGCCTGGGCGGCCCCGGCACC 86258 29 96.6 33 ............................A GGAAGCGGACCTGATCGACCAGAAAGATACCTC 86320 29 100.0 32 ............................. ATTCTCCAGTTGATTGTCGGTGAGCGGCTCGG 86381 29 100.0 32 ............................. CCGCCCGTGCTCGCGTCAAGGCACATTGCATG 86442 29 100.0 32 ............................. AGACGCCCGGATTCATGGGCGGCTGGATCTCG 86503 29 100.0 32 ............................. GTAGATGGCCCAGGCACAGTGGCGCTGCAGGT 86564 29 100.0 32 ............................. TTCGCCATCAAGTCCAACAGCACCATCAAGGA 86625 29 100.0 32 ............................. GCACTCGCGTCGATCGGCACGTCCTCGGGTGG 86686 29 100.0 32 ............................. GATCTGATCACCCAGCACGAGAAGTCGGTCAA 86747 29 100.0 32 ............................. TGCTTGACCGCGCCGCTGCTGACGCTGCTCAT 86808 29 100.0 32 ............................. GAGGGCTGAGATCATGACTCTGCAAAGCACTG 86869 29 100.0 32 ............................. TTGCTCGATGTGTTCGACAGTGGTGTAGACGA 86930 29 100.0 32 ............................. TACTACCAGAACTCCGCCACCTGACCGGCCGC 86991 29 100.0 32 ............................. GACTGGTCGGATTACCAGCTAACCCCGCAAAA 87052 29 100.0 32 ............................. CCCTCCACCACCAGCACCGAGCCCGCCGGCAC 87113 29 100.0 32 ............................. AACTCGCGCAGCAGCCCGCCGGCCATCTGGGC 87174 29 100.0 32 ............................. ATCATTTCCTTCTGGTGGGCCTGCACCATCGG 87235 29 100.0 32 ............................. ACCTGCTTCGTGGTGTCCGCGGCGGCGAAGGT 87296 29 100.0 33 ............................. CACGTCTGCCCCCTGCAGTTCGACATCGTGGAC 87358 29 100.0 32 ............................. TGCGCAGGGCGGCCGGCAGAGGGCTGTTGTCG 87419 29 100.0 32 ............................. GGACATGTGAATCTCCGTTCAATGGGTCTGGA 87480 29 100.0 32 ............................. ACCTTCAAGGCCCCGCCCCACCCCACGTACTG 87541 29 100.0 32 ............................. GAAGCCGAATTTGCCGCTGCCAAGCTATACGA 87602 29 100.0 32 ............................. CCATTCCGCCGCTGGGTGCTGGATGTGCTGGA 87663 29 100.0 32 ............................. CGCGAGGCGCTGATGGCTCAGCTGCAGCACCT 87724 29 100.0 32 ............................. GTCTTGCTCCGTACCTTCCAGCTCGTCACCGC 87785 29 100.0 32 ............................. GAAACGCAGCGGTGAGAGAGCGGTTCGGTGCC 87846 29 100.0 32 ............................. GTGAGCACGGTGCCAGATGCCGGCGCACTGGC 87907 29 100.0 32 ............................. ACCAGGCCCGAGGCACGGGGACACCTCCCCGC 87968 29 100.0 32 ............................. GTTCGCCATGCTCGCTCGTTTCCTCCGCTGGT 88029 29 100.0 32 ............................. TCTTCGAGATGTACGCCCAGCCCAAGGCCACG 88090 29 100.0 33 ............................. CACTGGCTATTCTCACCTCTGCCCGGGCATGAG 88152 29 100.0 32 ............................. TGGCCAAACCGCCAGCCTGCCCACCCTCACAA 88213 29 100.0 32 ............................. CGCTTGCGGCCGGTGAGGATGCACCAGAGCGC 88274 29 100.0 32 ............................. GTGGCGCTGTAGGTCACCTCCACAGTCTGGCC 88335 29 100.0 32 ............................. CCGACAGATGGAAGCTATGGCCTCCTGATTCA 88396 29 100.0 32 ............................. ACGACATCTTTCAGCGCGCAAAAGAGCGCATC 88457 29 100.0 32 ............................. GGCGTGGTGCGGGCCGGTCTGCCCTCGGTGCA 88518 29 100.0 32 ............................. CCGCTGAACTTCGACGTCTGCACTTCGACGTT 88579 29 100.0 32 ............................. ACGAAGGCCTGGCGGTGCTGAACCGCGACGCC 88640 29 100.0 32 ............................. TAGTTGGCCAACTCGACGTGAAATCCATTCAC 88701 29 100.0 32 ............................. ATTGGGATGGTCGAGATCCTTGGGCATGGTGC 88762 29 100.0 32 ............................. GTCTCGCTCCGTATGCTGTGACGCCGTCCAAG 88823 29 100.0 32 ............................. TTTTCCGGCCTGCATCCCTGATGGCCAAGGCC 88884 29 100.0 32 ............................. TGGGTAGCCGTGCCGAGGGTCGTGACTACAGC 88945 29 100.0 32 ............................. AAGAGCCAGGAAACCGGCCAGCTGGCTGCCGA 89006 29 93.1 0 .............A...A........... | GG [89031] ========== ====== ====== ====== ============================= ================================= ================== 88 29 99.9 32 GTGTTCCCCGCGAGCGCGGGGATGAACCG # Left flank : TCCCGACCATCGAAGACGTGTTGTCGGCCGGCGGCATTGCGCCGCCCGAAGCCCCCGCGGAGGCGGTGCCCCCCGCCATTCCCAACCCGGACAGCCTGGGTGACGCCGGCCACCGCAGCCAATGAGGTCCACGTGACATTTCTGGTCGTCGTCACCGAGAACGTGCCACCCCGCCTGCGCGGGCGGCTGGCCATCTGGCTGCTGGAGGTGCGGGCCGGGGTCTACGTCGGCGACGTCTCGCGCCGCGTCCGGGAAATGATCTGGGAACAGCTGGCCCAAGGCTACGAGGACGGCAACGTCGTCATGGCATGGGCCAGCCCCAGTGAATCCGGCTATGACTTTCAGACCCTGGGTGCCAACCGGCGAGAGCCAGTGGACTACGACGGCTTGCGTCTGGTGAACTTCCTGCCGCCGGACAACCCCGCTCCTTAACAACCCAATCAATCGGTAGAACCCAGGCCTCCCATTTTTCCAAGATGGGACAATGGATTGCATTTGGT # Right flank : GACGCATTTGCCCCAAACACCGTCCACCGGCGCCTTGAACGCCTACCGCGTTGCACGGTCCCGCAGCCTGAACCACAGGGTTGACCACCCTTGACATTCCCACCATGGCAATGAATAGGCTCGCACGGTCAGACTTTGCTGAGCCCTGTGAGCTCTCCTCGCGTTCAGGCCGCTCCGGTGCTGAACGTCATGTCCCACCCGACAGACGAAAGGATGCAGAAATGAACGTCAAACGCGCAGTGATGGCCACCGCCGCGGGGGCCCTGCTGGCCGTGGCCGCCTGGGCCCAGCCCAGCGGCTCGGGCTATGGCATGGGCGGCTACGGCATGGGCCCCGGCATGATGGGGGGGCAGAGTCAGGCCTTTGCCGATCTGAAGCTGAGCGCCGAGCAGCGCAAGAAGATCGACGACATCCAGGAAGAGACCTTCAAGGCGATGTGGCAGCTGATGGGCACCATGCATCAGCAGGGCTACCGCATGCACGATTGGGCCGGGTCGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 450322-459422 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCB010000007.1 Ideonella sp. B7 NODE_3_length_606669_cov_410.158710, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 450322 28 100.0 32 ............................ TAAAGATCAACCGGACTACCCTGCAATGGCCT 450382 28 100.0 32 ............................ GTGAGGCCGTGGTGGTGCAGGCTGTCGGCTGG 450442 28 100.0 32 ............................ GCCCAAGGTCCGGTGTTCCAAGGTCAGCTCAC 450502 28 100.0 32 ............................ TGGTTGTTTGGCGCCGCAGGCAGGGAGACGTG 450562 28 100.0 32 ............................ TCAGTGCTGAGCACGTAGACGGTGACGTAGCC 450622 28 100.0 32 ............................ AAATTCTCCATCTATGCCGGTGCCCCCATGGC 450682 28 100.0 32 ............................ TGATTGATACGCCCCGACGGGGACATGCTGTC 450742 28 100.0 32 ............................ CGAGACGCAGCGCACCAGGGGCCGGGCATGGA 450802 28 100.0 32 ............................ TGTTGATTGAGGTTTGCCCTACATCGCAAACC 450862 28 100.0 32 ............................ ACTGTGGGAAGGCGGTACGGACGACGATGACA 450922 28 100.0 32 ............................ TCATTAGGACCTTGATCGGAATGGGACTCTCT 450982 28 100.0 32 ............................ AGCCCCCAGTGTGGCCGTCCAGGTGCTGCCGC 451042 28 100.0 32 ............................ GTGTTGAACCGGAGCACATTGCCCACCGACCA 451102 28 100.0 32 ............................ TCAAGAGCGTCGACTCGCTGGTCATCTCTGGC 451162 28 100.0 32 ............................ TGGACGGCAAGGCCTGGCTGGACGAAACGGTC 451222 28 100.0 32 ............................ CGAGGCCCTCGTAGTTGGCCGTCTTCTCCGGC 451282 28 100.0 32 ............................ TTCCAGAACTACTGGGACGGCCTGCTGGCCAG 451342 28 100.0 32 ............................ TTCGCGGCATCCAGGCGCGGCCAGTCCGTGGC 451402 28 100.0 33 ............................ TCCAGGGTCTGCGCAGCATGATCACGCCGGTCG 451463 28 100.0 32 ............................ AAGGTGCTCGCCCAGCAACTTCAGCGCGCCGA 451523 28 100.0 33 ............................ CCTGGGTCCAAGCGCTGCGCAGCTCGTAGAGGG 451584 28 100.0 32 ............................ ATGTCGAACCGCACGGGCACATGGAACTCGCC 451644 28 100.0 32 ............................ TGCACGACCTGGCCGGCGAAAACCAGCTGGTG 451704 28 100.0 32 ............................ TTCAGGTCGCTCAGGCGCTGGCCGTCCACCCG 451764 28 100.0 32 ............................ TGTGGCGTCCGACACGTCGTTGAGCGCGTCGA 451824 28 100.0 32 ............................ AGGCCCTGGAGGCCATCGGCCTCAGTGCCAAA 451884 28 100.0 32 ............................ ATCTCCAGCGCGCTGATGTTTTCGATGGTGCT 451944 28 100.0 33 ............................ TACGTCATCGGCCACCCGCGCGTGGCGGGGGAT 452005 28 100.0 32 ............................ TGCTCACCGGCTGCGTGGCCGCCATCGCTGTG 452065 28 100.0 33 ............................ CTGGTAGGCGGGATTCAGCGCCGCGACCACATC 452126 28 100.0 32 ............................ GCTGGATGTTCCTCCAGCGCAAGGGCTACACC 452186 28 100.0 32 ............................ ACCAGCCAGTGGCTCAACACCGTGTTTCTGTT 452246 28 100.0 32 ............................ TGCAGGCGCTCCTGCCCCCTCTTCTCCAGAGC 452306 28 100.0 33 ............................ GGCCGGGCCGCCGCAGGACGGCGATGCAGGGCA 452367 28 100.0 32 ............................ GGCGGGTACAACAAGTGGGATGGATGGTTGAT 452427 28 100.0 32 ............................ AGGCGCGGGAGAAGTTGCCCCGATCGTCGGGC 452487 28 100.0 32 ............................ TTCCCCCCCAACAGATCAATCCCGAATGGATC 452547 28 100.0 32 ............................ TTGAGGCCCAGGTGACCGCCCTTGAGGCCCAG 452607 28 100.0 32 ............................ GTACCGCAGCAGCGTTTTGCACATCAAGCAAA 452667 28 100.0 32 ............................ AGCGACCACCGCGGCGCACATGGCCGGCCGGT 452727 28 100.0 32 ............................ TTGTCCACGCTGAGATCGGAGGCCAGCTGCTT 452787 28 100.0 32 ............................ AGCCCGTGAACGACCGCGGGGAAACGTGGGAC 452847 28 100.0 32 ............................ CAGGGCGAGCTGCTGGCCCTGGAACAGCAGTT 452907 28 100.0 32 ............................ TCGTCGTAGCCGGTCCAGTAGTCGGTGGCGAA 452967 28 100.0 32 ............................ CGCTGGAATACAACCAGTTCATGCCGGCCCTG 453027 28 100.0 32 ............................ TCGGCCAGTGCGGGCGGCGTGGAATCGTCGTC 453087 28 100.0 32 ............................ TTCCACGCGGGTGAACTTGTCGGCCACCTTGT 453147 28 100.0 32 ............................ GCGTCGGCGGCGGCGTTCTGAACTTCGAAGCC 453207 28 100.0 33 ............................ AGCACGCTGTGGTTCGCCGCCCAACAGGAACAG 453268 28 100.0 32 ............................ AGAGCCAGGCCAATGCCGGCGGCCATGGCCGC 453328 28 100.0 32 ............................ GGATGAGTCCTTTCGCTTGAGGTACTGGACAT 453388 28 100.0 32 ............................ AAGCTCAGGAAGTTGGTACTTGTAGACCCGTT 453448 28 100.0 32 ............................ GTTCTTGCGGCTTACGACCTCGCGCTGGTGGG 453508 28 100.0 32 ............................ TTGGTGATGACCTCGCGGCGCAGCTGCCAAGT 453568 28 100.0 33 ............................ AGTCGATCGTCTATCACGTCACCGGCCTGGATG 453629 28 100.0 32 ............................ TGATGACCTGACCACCGGGCGGCGCTGAAAGC 453689 28 100.0 32 ............................ GGCGAGGCCGATGCCGGCTGGGTGGGTGAAAC 453749 28 100.0 32 ............................ GGACCTGCAACTGGCCCCGCGCGAGCCGAACT 453809 28 100.0 32 ............................ GCTCGCGGCATCACCGTCGAAATGCTGCCGGC 453869 28 100.0 32 ............................ TCGAAGTTTTCGAGCTTGATCTTCTCTGCGCC 453929 28 100.0 32 ............................ TTGCGTCCAGCAGCCTGCCAGCTCAGGCACAT 453989 28 100.0 32 ............................ AGGCACACGAGAAAACATCTCCGGGCCTTCGG 454049 28 100.0 32 ............................ ACGCCCAGCACGCCGGCGGGCGTGCTCCAGGC 454109 28 100.0 32 ............................ TTGCGGGGTCGGCCACGGCGCTTGGGCGCATC 454169 28 100.0 32 ............................ ATCGCCGCCGACTTGGCCAAGCTGCGCGGGGC 454229 28 100.0 32 ............................ GACCAGTACCGCGCCCAGGTCGACCAGCTGAA 454289 28 100.0 32 ............................ ATGTTGACCATGTCGATCTCGACCAGGTCGAC 454349 28 100.0 33 ............................ GATGGAGATGGCGTGGTTGTGGCCGCCGGCGGG 454410 28 100.0 32 ............................ AGGCGAGGACGCACCAGGCGCAGAGGCACCAG 454470 28 100.0 32 ............................ ACCTGCTGGCCGCCGGGCAGCTCAACCGCGGA 454530 28 100.0 32 ............................ TGGGCATGGGCAACAGCCACGCCGGACATCGA 454590 28 100.0 32 ............................ TCCGAGGACCGGCTGCTGGTGCTGCCGCGCTA 454650 28 100.0 32 ............................ AGCGGCTGGACACCGCGCCGTGCCGGCGCACC 454710 28 100.0 32 ............................ GCGCTGGTGTTCTGGGACACGACGCACGGACC 454770 28 100.0 32 ............................ ACCATGAAACCCGCTGGGCATGCAGCCGGCGA 454830 28 100.0 32 ............................ TTTCGGGGTGGGGGTCGTGGTGGGGGGATAGG 454890 28 100.0 32 ............................ TTTGATGGAGCTATGCCGGTGCGGATTCCATC 454950 28 100.0 32 ............................ TACCTGGACCTGGGCCAGGTGATGCGCAAAGC 455010 28 100.0 32 ............................ AGCAGGCTATAGACCAAGTCCATCGGGTTGGA 455070 28 100.0 32 ............................ ATGAACGACACCGCCACCGTCACCCTCGACAC 455130 28 100.0 32 ............................ AATTGGCGCCGTCCCACACGGGCACCAGCCGC 455190 28 100.0 32 ............................ TTCGCTGCCTCCTCCTGGGCCTTCCTCGCCTC 455250 28 100.0 32 ............................ ACCAAGACCACCGATGAGGCCGCGCAGACCGT 455310 28 100.0 32 ............................ TGGAATCTCTCTATGCCTGCGCCCAGACCTGG 455370 28 100.0 32 ............................ AGCACACGCCGGTCAAAGTCGATGCGGATGTT 455430 28 100.0 32 ............................ ACATGCAGCAGCGCGGGCACCTCGCGGGCCCA 455490 28 100.0 32 ............................ ACCACCTGGATGTTCTCCAACGTGGAGGTGGC 455550 28 100.0 32 ............................ TGCCAGCAGCCGGCGATCTGGTCCGGCCAGGT 455610 28 100.0 32 ............................ GCTGGACCTCAAGCAGCCCACCGGCCGGTGGC 455670 28 100.0 32 ............................ ACGCAGATGACCAGGCCAGCGCAATCCACCGC 455730 28 100.0 33 ............................ AGTTCCCAGGCGTGTAACTCGTGACTGACCTGA 455791 28 100.0 33 ............................ AGGCACGCCAGGCGAAGCAGGCGCAGGGGCTGA 455852 28 100.0 32 ............................ CACACCCTGGCCACGACCCGCACAGCGCTGCA 455912 28 100.0 32 ............................ GTCGACCGCGCAGCGCGGCCGCAGCATCTCCT 455972 28 100.0 32 ............................ AGGGCGACCCCTTCGATCAGCTCTGCCAGGTC 456032 28 100.0 32 ............................ ATGTGCGCTGCGGTTGTTGCCGGCGACCTTGA 456092 28 100.0 32 ............................ AGCGGGGGAAGCGGCGTGTAGTCGTAGTCGAT 456152 28 100.0 32 ............................ ACCTATGACTGCATTGCGTCCCACGCCTACAA 456212 28 100.0 32 ............................ GCTCAGGTTGGCGTCGCGCAGGTTGGCGCCGC 456272 28 100.0 32 ............................ CAACCAGGGCATCGAAACGGACGTGGCGTTGG 456332 28 100.0 32 ............................ GACATGGGCGTGGAGACCGGCACGGTGCTGCG 456392 28 100.0 32 ............................ GGCGCGCTCCAGGGCTACATCGACCCGAATGG 456452 28 100.0 32 ............................ AGGTACATCTTGGCGCCGACTGCCGCTCGGTA 456512 28 100.0 32 ............................ ACCATGACAAGGTGACCCCAGGCAGCGGCAAC 456572 28 100.0 32 ............................ TGCGCGCTGGCACTGTCCGCGTGTCAGTCCCC 456632 28 100.0 32 ............................ AGTGCGGTCAGGCCAGCATCGGCCGTCAGCAC 456692 28 100.0 32 ............................ ACCGGCTGGCGGGCTCGGACGCTGCCGGTACT 456752 28 100.0 32 ............................ ATACCCAGAATGCGGGCCTCCCGCGGCTGGTC 456812 28 100.0 32 ............................ AGAATGACGATTCGACAACCAGCGCACTGAGC 456872 28 100.0 32 ............................ AGCTGTGCGGCCATCATGGCGACCTGTTCAGG 456932 28 100.0 32 ............................ AAGTAAAAGTCGTTCAAGCCGTTTCCTGTTTT 456992 28 100.0 32 ............................ ATCGACGCCCGGTAGAGCTTCTGCCCGTCGCA 457052 28 100.0 32 ............................ TCCAGCGCCAGGGTGCCGCCGGAGATCGTGAC 457112 28 100.0 32 ............................ TTGTAGCGAACGGCGGCGAGGTCTTGGAACAG 457172 28 100.0 32 ............................ GCTGGACCTCAAGCAGCCCACCGGCCGGTGGC 457232 28 100.0 32 ............................ ACGTGATCGTCAGGTCCTGCACCGTGCCGTCG 457292 28 100.0 32 ............................ GTCTTGCCGTCGCGCTGGTTCTGCAGCAGCAC 457352 28 100.0 33 ............................ GTTTTTCCATTCCGAGATGCGCGATTTCGGAAC 457413 28 100.0 32 ............................ TCTTTCAAAGACCCAATACAACTTCTAGCCTT 457473 28 100.0 32 ............................ ATGAACGACACCGCCACCGTCACCCTCGACAC 457533 28 100.0 32 ............................ TTCCAGACCGACAGCCGCAGCACCTCCCAGTC 457593 28 100.0 32 ............................ TTGTTGATGTCGCCGCGAGGCAGCAGGGTGAA 457653 28 100.0 32 ............................ TGAGTGCCGGACCAATTCGCCAAAGAACGGGC 457713 28 100.0 32 ............................ GCTGACGCCGGCAGACCAAGCAGGCCGAATTC 457773 28 100.0 32 ............................ GAAGAAGAACATCAAGAGCACCCACATAGCGA 457833 28 100.0 32 ............................ TTTCTGGGCGCGGCTGTGGCGTTCAGGCTCGC 457893 28 100.0 32 ............................ ACGAGAGGCCAAGGCGCCGTAGGTTCGCTGAA 457953 28 100.0 32 ............................ ACCGAGTGAAGGCGCAGGGCCTCGGACCGATG 458013 28 100.0 32 ............................ ACAGGCGAGGTGCGCGAGGCCGACCGCTGGCT 458073 28 100.0 32 ............................ GCGTCTCAATCTCAGACCGGGACTCTTTACAA 458133 28 100.0 32 ............................ ACGTCGATGTCGGCCGTGGGCTGGGCCATTTC 458193 28 100.0 33 ............................ AGCCCAGCAGGTCGGGGGACTTGAAAACCTTAT 458254 28 100.0 32 ............................ TGTACGACTGGCTGAAGCATCTCGACGGCTTC 458314 28 100.0 32 ............................ ATGTTCATGTGTCCTCAGTGCTCTGCATCGGT 458374 28 100.0 32 ............................ TCACGGTTCACGAGCTCGGGAACGGCCACCGT 458434 28 100.0 33 ............................ GGTGACGTAGTCGAGCTGGCGCCCGGCCACGCC 458495 28 100.0 32 ............................ TCCCACAGGTTGGTGGGCATGGCCACCACGGC 458555 28 100.0 32 ............................ ACCACGGCACTCGCGTCCAAGAGATCAACACC 458615 28 100.0 32 ............................ AAGTGTGGGCGCATCGTGAAGCCGTCGTTGCC 458675 28 100.0 32 ............................ TAACGCGAGCCGCCCATGATCCAGCCCAAAGA 458735 28 100.0 32 ............................ TAACGCGAGCCGCCCATGATCCAGCCCAAAGA 458795 28 100.0 32 ............................ GCAGCGCGTAGCCAGGCAGCAGGCTTACCCAC 458855 28 100.0 32 ............................ CGCCTGGTGATCCTGCAACCTCTGCAGGTCAG 458915 28 100.0 32 ............................ TACAACGTGCAGCACATCGCCATCGACGCGAC 458975 28 100.0 32 ............................ AGCGATTGCAACGCGCGGGCCCTCAGTTCGGG 459035 28 100.0 32 ............................ AGTCAAAGCTCGCGCGTGAAAAATGGGAACGT 459095 28 100.0 32 ............................ TTTCGCGCTCAGGGCGTTACCGAAGGCCGCAA 459155 28 100.0 32 ............................ TCGCTCCCGTGGAGGCCGACGCGCGCCGATGG 459215 28 100.0 32 ............................ AAGTCCTTCGACATTGCAACTGCGAGGGCCAG 459275 28 100.0 32 ............................ GTCCATTCCAGACGGGTTCGCATCTCGTTCAT 459335 28 100.0 32 ............................ ATCGAGATCACCGGGCGCAAGTCGACGGGCAG 459395 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 152 28 100.0 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GAGCTGACGCGGCTGATGGAACACGACTGGCTTCAAGGCATGCACGACCACGTGGATGTGCGGCCCCTGGCCCCCGTGCCTGCGCAAGCCCTCCAACGCACCCTGCGCCGTGTGCAGGCCAAGAGCAGCCCTGAGCGCCTGCGGCGGCGCCAGATGCGCCGACACCACCTGACGCCGGAACAGGCCCAGGAACGGGTGCCTGACAGCTGCGCAGAGACCTTGAGGTTGCCCTTCCTGACCTTGGCCAGCGCCAGCACCGGCCAGCGCTTCAAGCTCTTCCTGCGGCTGGGGCCACCCTGCGACGCCACACAGGCCGGCAACTTCAACAGCTACGGCCTGAGCAGCACCGCAACCATTCCGTGGTTCTGACCCTTTTTTCTGAAGAGGAGTGCAAGTCATTGGAAATCAGTCACTTGCACGACGATCCACCACAAGGGTCAGGGAGCCTCTTGGGGTAGAAAGGCTTTGCACGATAGTCACTTAGGCCCAGGGGCGGCCTA # Right flank : AATGCCGATGAGCTTGAGCATGCCCAACACGATGAATCGCCCCGGGGTCAGACACGTTCCATGCCCCGCAACATCGAAATCAAGGCCCGGGTCGATGATCTGAAGACCCTGGCCGCGCGAACGGCCGCCATCGCTACCAGCGGTTCCACCGCCATTGCGCAGGACGACACCTTTCCCCGCTGCGAAGCCGGGCGGCTCAAGCTGCGCGAGTTCGCCGATGGGACGGGCCCAAGATGTCCTTCTACCTGTTGTCGCCCACCAATGCGTCGGCGTCCCTGCGTGCGGTGATGACCCAGGCCCACGCGCTGATGGCGCAGCCCGCTCAGCGCCGATGCCAATAGGCCGCCGCCTGGGTTCGGCTGTCCAGGGCCAGCTTGGTCAGGATGTTGGCCACATGGCGTTTGACGGTGTGCAGGCTGAGGCCCAGCGCGCGGGCGATGAGCTTGTTGCTCTGGCCCTCGGCCAGCAGGGCCAGCACCTCGCGTTCGCGGCTGGAGAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //