Array 1 168260-169200 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP035196.1 Klebsiella pneumoniae strain LH375 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    168260	    29	 100.0	    32	.............................	ATTTTTTGGGGCACAATTTGGGGCATTTTTTT	
    168321	    29	  96.6	    32	A............................	AGGGTTTCGATTTTATCGGGATAGAAATGAAT	
    168382	    29	 100.0	    32	.............................	TGGCGGACGTTGTACCTGTGAGTTAATTCTTC	
    168443	    29	 100.0	    32	.............................	ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG	
    168504	    29	 100.0	    32	.............................	TCCAGGGGCAAAGAATTGCCCATTATCGTACA	
    168565	    29	 100.0	    32	.............................	TTTGCAATATCTGCCTGCGCCGCCGCCAACGT	
    168626	    29	 100.0	    32	.............................	CTCGGATAAAATGCCTTGCATGAGGCGAACGA	
    168687	    29	 100.0	    32	.............................	GCGTCCAGTTGAACCCGGCACATTCCCGCTGG	
    168748	    29	 100.0	    32	.............................	TACGCAGCCGGATCCAGGAGCGCATGGACGCT	
    168809	    29	 100.0	    32	.............................	GCACGATATTCAGCATCATCAGGACGGTTCAT	
    168870	    29	 100.0	    32	.............................	ACCTACCAGATCCACACCGGGCGCTGCGAAGA	
    168931	    29	 100.0	    32	.............................	TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA	
    168992	    29	  96.6	    32	........T....................	CCCCGTCGTCATTCGCGCATTCTGCGCACAGA	
    169053	    29	  96.6	    32	.....A.......................	TGCGTCACGACGCCGGCGACAGTGACATCGTC	
    169114	    29	 100.0	    29	.............................	GGGTTCACTTGGGTGAAACTGAACTAACT   	
    169172	    29	  75.9	     0	...........ATTC...A......G..C	|                               	
==========	======	======	======	=============================	================================	==================
        16	    29	  97.9	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank :  CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//