Array 1 2123-146 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDP01000068.1 Levilactobacillus koreensis JCM 16448 NODE_174, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================ ================== 2122 28 100.0 33 ............................ CGAAAGTACATTGATCAGGCTAAGGACGAGTCA 2061 28 100.0 33 ............................ TTACGTTCCCGGCAATCAACTGTTCCGCTGAAA 2000 28 100.0 33 ............................ CATATTCGTACAGATCGTTGTTCAACATCTCTG 1939 28 100.0 33 ............................ CGCACCATACTCTCAATGATCGACACACGCTCT 1878 28 100.0 33 ............................ CAGCCAACGTGAGCCTTTTCCTGTAGCCTCATG 1817 28 100.0 33 ............................ TATGGGAAGTCTCTTCCCAGAAGTAGATGCTGG 1756 28 100.0 33 ............................ CTATCAGGCATAACCGTGCTCGTGGTACACACG 1695 28 100.0 33 ............................ CTTTTCAGTCTTGTAATTCGTCTTACCGGCTAT 1634 28 100.0 33 ............................ TTTGGCCCCGTTAAAGGTCATTCGCTTAGTTTG 1573 28 100.0 33 ............................ CTTAATTTTCATAGTGTTTTCCTCCTATACTGA 1512 28 100.0 33 ............................ TTACTCCAGCGGGTTCAAATCTTAGAGAGTGAG 1451 28 100.0 33 ............................ CGTACAAGATGTTTTCGACAAAGCTAACGCAAA 1390 28 100.0 33 ............................ CTTTTGTTCCTTTTTTGAAAAGTTTCCTATGGG 1329 28 100.0 33 ............................ TCGTTCTATACCATTGAGAGTTAAGGACGAACT 1268 28 100.0 33 ............................ TCAGCATACGGTGGACAGGTAAACACCATGTCA 1207 28 100.0 33 ............................ CAGTGATGAGACGAAGTTTAAACGCGATGTTCA 1146 28 100.0 33 ............................ CAAACAGATCGGCTCGTTACGTGACCAGTTCAA 1085 28 100.0 33 ............................ TGCAGCCAACGTTAGCAATGCTGCTTGAATCGC 1024 28 100.0 33 ............................ TAGGACCGTTTGGGAACCTCTACTGACTTAGCG 963 28 100.0 33 ............................ CGAGTGGCAGGCAAGCTTTTATACCCGGCAAGC 902 28 100.0 33 ............................ CGATTGAAATGGGGATCGAGGGGGATGGCAATG 841 28 100.0 33 ............................ CAGTGCCGTCTGGCTTGTAGACAACAAGCGCTC 780 28 100.0 33 ............................ TAGAACATTTACTGTTCTCCTTTCGACAACTTC 719 28 100.0 33 ............................ CATTATTGATTCAATTTACAACGGCAATCAGGG 658 28 100.0 33 ............................ CGACTATTTACCAGCAATGGCTCAGTATTGGTA 597 28 100.0 33 ............................ TATCGGCAAGTAATCCTGGATTGGGAGCAACAA 536 28 100.0 33 ............................ TCTTGGTACCGCCCTTAGATAGGGTGCAGCGGA 475 28 100.0 33 ............................ CTGGGTCCCATGCACGAAACTTAATATCTCTCA 414 28 100.0 33 ............................ TAAAAATTGGAAATTGATGATCAATTACGGAGC 353 28 100.0 33 ............................ TGAACCTCTCCAAACCGGTCGAACTCGTAGTCC 292 27 89.3 92 ......................A.-..T TCCTAAAAAGAAACATATGATATAATCATGTATATTCCCTACAGGTGTAGGGGTGATCCGGGTGAAGGTGTACTTCATATTACGGAGCGAAG 173 28 67.9 0 A.......TAC.G..GT.........TT | ========== ====== ====== ====== ============================ ============================================================================================ ================== 32 28 98.7 35 GTGTTCCCCGTGTATACGGGGGTGATCC # Left flank : AGGCAATACGTCTTACAAATATTGTTATATCAAGGGATTAGCAACTACTGGTTCTTGTTGGAATATATGAAAATCAACTCAAAGTTTGAGTGCTGGTTAAAAAAGCTTTGACAAACGCATAAATGTCGTGTATAGTTATCTATTAGAGTTTAAGAGATGCTAATAACGTGATTCAGAGAGATTGGTTAGCAAGCCGGAGTTTCTTAGATTTTAAAATGGTCCGCCTGTTCAGAGGAGCAGGGGGCCATTTTTTTATGTAGTTTTTTGAAGCGATACTCTTGAGTTCTGAGTAATAATGTTGATCTAATTGATATCGATCGTAATGAGAATGGATGATAAACTAAAACGTTTTGAGCCCATTGTTACGGAATTTTTTTGTTATTGTTTTGACGATAGAGTAATTGTTAATCGTACATTGCTGAGGTATGCTAGAGAAGCAAGTTAAAGGAAAAAGGCACTTTTGGAAAAATAGGATGCTGGTGTGACGGCGTTTGTTTAGT # Right flank : TTTGACTTGATAACACGACCTTCTAATTCATATATAGCGAGTCCGTTTTAATAATGTTGAAGAAATAGTTTAGAACAGAAACAAAATATATTGGCGAATTTTATAATCAAGTTAGCCACTTAGAATTTAGACCAAAATAAATACAC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGTATACGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9782-11760 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDP01000089.1 Levilactobacillus koreensis JCM 16448 NODE_287, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9782 29 100.0 32 ............................. AGTGGTTTTAAAATCATGTTCATTCTGCGCAA 9843 29 100.0 32 ............................. TAGAGAGTTGCAAAAGAACGGATGGGTGAAGA 9904 29 100.0 32 ............................. CAGATAGCCATGGTTAACGATGCTACTAGTGG 9965 29 96.6 32 ............................C AAGATAGGCGGGATCGTCCCAGTTGAACCACA 10026 29 96.6 32 ............................C TGATTAGTCGAACGGCAATGGAATGTCTTCAG 10087 29 96.6 32 ............................C GAGAACGACTGCCATGAGTGTCAGCTGTCCTA 10148 29 100.0 32 ............................. GACGATGGATACAGGGCTCTACTCGGTCGGTG 10209 29 96.6 32 ............................C GAGGCATTCTTCTTGTTGAGCCGTTTCAGCGA 10270 29 96.6 32 ............................C GTCGGTAGGGTACCCATGAAAGACGGACGGTT 10331 29 100.0 32 ............................. CATGTGGCGCCTCCTTGTGTTCATAGCTCTTT 10392 29 96.6 32 ............................C ACGGATATCATGGCAAAGGCTGGGTACGCCGG 10453 29 100.0 32 ............................. ACTACTCAGACGATCCGCGGATAGAGGTCACG 10514 29 96.6 32 ............................C AGATGGTCTTGCAGATACTTATCGTCAATGCC 10575 29 100.0 32 ............................. CTTTAGCTATTATTCCATCGTAAACGGCGTCA 10636 29 93.1 32 C...........................C TTGCCTGACATGTTTTCCAGAAAAGTTTGACG 10697 29 96.6 32 ............................C AGATTCTGGAACAATAACTTCGGTGAGTGTAG 10758 29 100.0 32 ............................. TCCCGTCTGCTTAACTGGCTGTAAGTCGGTCA 10819 29 100.0 32 ............................. CTCTATCCGTCTTGTGGTCGATAGCAGACCCG 10880 29 100.0 32 ............................. CCTCCTTTTCAGTAGTGAAATCAATCCAGAAC 10941 29 100.0 32 ............................. TAACTGACTAGGAGGCTACATCATGACAAACT 11002 29 100.0 32 ............................. TTCTTGGCTTCGCATACCGGTCAGCAATGCAG 11063 29 100.0 32 ............................. TACTGCGAGCTCTGGAACCACGGTATCAGCGA 11124 29 100.0 32 ............................. CAAAATCGCATTAGAACTCTTCAGGTGAGAGA 11185 29 100.0 32 ............................. TTGGAACCTCAAGCGGCACATATGGAACGCGA 11246 29 96.6 32 ............................C AAGCACTGCGTTACTGATGGTGTCAAACTGCA 11307 29 100.0 30 ............................. TGGCGTTCTTACTCCACCGTTCACCTTGAA 11366 29 96.6 32 ............................C CCTTGTGTCGTACCATCTAGTCCATTGGATAC 11427 29 96.6 32 ............................C GACCGAGATTTTAAAGTTGGTGATCGCTTATG 11488 29 100.0 32 ............................. TATGAAGTTTGAAAAAGCACTGGGATTACTCA 11549 29 100.0 32 ............................. CAAATTCGGGTGATTGACCAAGTGGCACTTAC 11610 29 96.6 32 ............................C ATGGGTCGTGTCGTTTGTGTTCTGCTTAACAT 11671 29 96.6 32 ............................C TGTCGGGTCAATGTCGAATCCCTTAGCAGCCA 11732 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 33 29 98.3 32 GTATTCCCCGTGTATACGGGGGTGATCCT # Left flank : GCCAAGGATGTGATCCTCTCGATTGGTGCGGTCAAGTGGGACCAAGATGGCAAGATTGTACAGTTTGATCAACTGATTCAAGGCGCACAGAAGATTCCGGAAAAAATAACGGAGCTTACTGATATCACCGTTGAAATGTTGGATAAGCAAGGTGTCAGTCTAGCCGTTGGGTTACAGGCCTTGCAAGAATTTATCGCGGATGCCCCCGTGGTTGGCTACAATTTGCACTTCGACGAAAGCTTTTTACTGGCTGCCTTTAGAAAAATTGGGCAATCCAGCTTGACGAATCGGTTAATTGATTTGATGCCTTTGGTAAAGAAGGCGAATAAGTTTCTGGACAACTACAGGCTGGAAACAGTTTTGGCAGATTATGAGATTGAAAACTTGCATCCGCATAACGCATTATCTGATGCGCAGGCAACGTTCGAGTTGGCGAGCAAGTTAAAGGAAAAAGGGCTTTTTTGAAAAATAGAATCCCGGTGTGACGGCGTTTGTTTAGT # Right flank : CATTGTGAGGTGATGCGTATGCGTCTCATGGAAAAGGATTGGATTACTTGACTGCATTTATAGGTGTGTGGAATTAGTGTCAGCAGTGTTAGAGTTGGCGAGTCGCTTAGAGTTGAGGTATAGTAAAGCAATGCTCAATAAGAGTGAGGTCGCTGTACACTACGTTAAGGTGATTGCGATACTAAAAAAAGCCACCTCATCTAAGAAGTAGCTCCGACAATACCGCGCCAAACTCGCGAACTTGCGAGGGCCGTCACAACCGGCTCTCGCTTTTATGTATACATTATAGCATGGGGGTTGATAGCGTGCAACGAGTTGAGTTAGCCAGAGAGATACAGGAGTTATTAGGGCGTAAGGAACTTACAGATTATGCCATAGGTAAGGGCGCCGGCGTTGATATTGAGAGCGTTAGGAAGTTACGCAAGGGTAAGAGTTCGGTTGGACGCTTGCAGTTAGATACGGTGCAGAAGCTGCTAGACTATAAGGTGCGATTAGATGAG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGTGTATACGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //