Array 1 38213-33237 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYFE01000004.1 Jannaschia aquimarina strain GSW-M26 jaqu_contig000004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 38212 32 100.0 34 ................................ ATGCCATGCCGGAAGGCACGGGAAAGCCCCGAAA 38146 32 100.0 33 ................................ CAACACCAAGCTGCGGAAGAAAAATATCCGATG 38081 32 100.0 33 ................................ GTGGGCTTCGGCTCCGACGCGATCTGGTCTTCC 38016 32 100.0 34 ................................ ATCATTCAGGTCGGCGACGGCGCGGACCCGGAAG 37950 32 100.0 34 ................................ AAGGTTCGCGTCAGGTCTTCGAAGTATACGCGCA 37884 32 100.0 34 ................................ TTCTCGTCAGTCATCAGACGGCCTCCTCCAGAAA 37818 32 100.0 34 ................................ CGTTCGCTCGACCGTGCCTCCGGTCGCGTTAGAA 37752 32 100.0 34 ................................ TGCTCGTGCGTTTCCTCCGTGTCGCGGAAGATCG 37686 32 100.0 34 ................................ AAATTCACAAAGACAGGTTATGTCGGGGAAGGAT 37620 32 100.0 34 ................................ GGGTGCCCTCGTATTTGTCCTTCACCGCACTCAG 37554 32 100.0 34 ................................ TGGCGTACAAGGCGACCCGCTCCGGCGGGAAGGT 37488 32 100.0 35 ................................ CGGTCGCGACAGGTCTGCCCAACGTGCCGGGGCAG 37421 32 100.0 35 ................................ CTCGGCGTCGCGGAAGATCGCACCCGTGATCGACT 37354 32 100.0 34 ................................ CAAGCCGCCACGGTGGACAACTCGCCCTTGGCCA 37288 32 100.0 34 ................................ GGTAGCGTGATGCCAAGCCACGCAACCGAGAGAG 37222 32 100.0 34 ................................ GGCTGCGGGTAGTTCGGGAGCGGCCCCGCCGAAC 37156 32 100.0 34 ................................ GTGTGCGGGACGGTGTTCCGGGGACTTTCCAGTC 37090 32 100.0 34 ................................ ACGAATCCATCGACGACCATGTTGGTCATATCAT 37024 32 100.0 34 ................................ TTTGTCTGCATATGCCCAATTCCAGCCGCCAGCG 36958 32 100.0 34 ................................ ACCTTTCGGAAAAATGGCGCCCCCTATGGGGCGC 36892 32 100.0 34 ................................ CGGTCGAAGCTGCGCGCGACCTCTCCCGGCTGCT 36826 32 100.0 34 ................................ AGGCCAGCCTCGCGTCGCTCCAGCGCGAGGTCAA 36760 32 100.0 34 ................................ TCACCGAAAATGACCCGCGTCACCGGTTCAACGG 36694 32 100.0 33 ................................ GATGCCAGCGGCCTTGATGCAGTGCGCAAACTC 36629 32 100.0 34 ................................ TTACGCGCACCTCCGAAAGGCCAGCAGCGGCGTG 36563 32 100.0 34 ................................ GTCGGCACGTTTTTCGGTTACCTCTGTGTCGGAT 36497 32 100.0 33 ................................ AACATTGGCGTTTTGGTCTGCGGTGCGGATCAC 36432 32 100.0 34 ................................ TATAGCGGGGGCGGCGAGGCGCCCGAGGGCGAAA 36366 32 100.0 34 ................................ ATCTTCGGCGCGCGTGAATTGGCGGGACTTACGT 36300 32 100.0 34 ................................ ACCGTGGACGGCAGGCTCGCGAGAGAGAGAACCT 36234 32 100.0 34 ................................ TTCGGCAATGCGCTTATTAAAGGCTAGGCAAAGA 36168 32 100.0 34 ................................ AGGGCAACGCAGAGTCATGTTTTCGCAATCCCAG 36102 32 100.0 34 ................................ GGTCCGGCAGCGGGCAACGGAGCATCGTTGTCCT 36036 32 100.0 34 ................................ AGGATGTGAATGGCAACACCACTCGAGCATCCGT 35970 32 100.0 33 ................................ TTGCGGCCTGCGACGGGGTCAGGCGTGTCGCGC 35905 32 100.0 33 ................................ TCACCGTACAGCACCCGCGCGCCTTCCGACGCG 35840 32 100.0 34 ................................ CCCAGCGACGAGGATATCGAGCAGGCGGCACCCA 35774 32 100.0 34 ................................ GGGAGCGCGCTGAACAAGCGAAACGAAAGTAGCG 35708 32 100.0 34 ................................ ATCTGATGGTTCTACTGACGGTTCCCCGGACACT 35642 32 100.0 34 ................................ TTCCACCAAGCGCATTGGCAATGACCGTCTCGGA 35576 32 100.0 34 ................................ TACTCCGACAACGCCGGCACATTCGACGCCAACG 35510 32 100.0 35 ................................ CATCCGTTGATGAGGAGAAAAGTCGAGCCGGTAAA 35443 32 100.0 33 ................................ AAGATGCGTGTGATCGAGACGGAGTTGGCTTGG 35378 32 100.0 34 ................................ ACGTCGCAGGTGCTCGGGCTGTTGGGATTGCCGT 35312 32 100.0 34 ................................ GATTAGGTCGTAATGAGAAATCACTATGACGTGA 35246 32 100.0 34 ................................ TCGGCGCAATCGTCTTGAGGTCCGCAAAGTCCGT 35180 32 100.0 34 ................................ ATCTGTTTCTCCTCGGGACACTGCGGCATCAAGG 35114 32 100.0 33 ................................ CGGTGTGCCGTGTCTCTATTTGAATCCAGCGGC 35049 32 100.0 34 ................................ TCGGTCACCGAAGATGCTGGCGGGCAACCGGACC 34983 32 100.0 34 ................................ AACGGCGGAGGATCTGGCAAACCTATGGCTCCAG 34917 32 100.0 34 ................................ AATCCGAGCGCCGATACCAATCCAGGTATCGTGT 34851 32 100.0 34 ................................ CTCGCCAAAAGCACTGATGGCCTGACCGCGCCTC 34785 32 100.0 35 ................................ AACTCAGCTTTTAGCAGGTTTCCCGCTCGGCCCTC 34718 32 100.0 34 ................................ ACAACTCCGTCGCGCCCCTGCGCACCGTCCAGGC 34652 32 100.0 34 ................................ ATTGGTCCCTCCTGACAGGCCAACCGGGCCGAGC 34586 32 100.0 35 ................................ CCCGCATCACGGCCACCGGGACATGGCGATCGATA 34519 32 100.0 33 ................................ CCTTACTACGGCTCCAAGTGGAATATCGCTAGG 34454 32 100.0 34 ................................ GCCTGCCCTTTCGTTGTACATCTCGACGGCTGTC 34388 32 100.0 34 ................................ ACGTGCCCGGAAACCGTGATGCGCGCAATACCCT 34322 32 100.0 34 ................................ CATCAGGACAGCTACCACTCGTGGCCATTCCGCT 34256 32 100.0 34 ................................ CATCGCGGCGACTTTCTTGGCGAGTTCCTGCACC 34190 32 100.0 33 ................................ TTCCCGGATCCGGCGAGGCTGCCTTGGCCGACG 34125 32 100.0 33 ................................ CACATCGCATACCAAATTGTCCCGGCGAGCGCC 34060 32 100.0 33 ................................ ATGGAAGCCACTTGGCGCCCCAACCCCAGATGT 33995 32 100.0 34 ................................ GCTGCCGAAAGCAGACATGGTGCGCGAAGAATGG 33929 32 100.0 34 ................................ GGTGCGTAAGTTTGCCAAGCGCCACGGCATTACG 33863 32 100.0 34 ................................ CGTCTGACAAGGCCAAGTTGCACAAGGGGCGGCC 33797 32 96.9 34 ..T............................. AGTTGTGTATGAGACGGGCGGCTTTAGTGTCCCT 33731 32 100.0 34 ................................ GCCGGTACCCTCGCCATCACCTGTCCCGCCAGTT 33665 32 100.0 34 ................................ AATCCAATGACACCGCCTGTGCGGCGCCCCCCCG 33599 32 100.0 35 ................................ GCCTGCTTCGCCTTCGAGGTGCCGGTTGCAGAGGC 33532 32 100.0 34 ................................ CGCAGATACGATCACCTGCCCACCAGAGACCGTC 33466 32 100.0 34 ................................ TTGACTACGGCTTCGATCTGGCGCCGGTCCTGGC 33400 32 100.0 34 ................................ CGGACGTAGAGCTTGGTGACGCCCTTCGGGACGT 33334 32 100.0 34 ................................ CTGGGCAAGATGTTGAAGGACCTGATGGGCTCCG 33268 32 96.9 0 .............................C.. | ========== ====== ====== ====== ================================ =================================== ================== 76 32 99.9 34 GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Left flank : GCTCCTGCGCGGCGACCTCGATGCCTATCCGGCCTGGGTGTGGTAGGTGTTGGTTCTGGTGACCTACGATGTGGCCAGCGGGCCGGGCGGCGCGCGGCGATTGCGCCGCGTGGCTCGGATCTGCGAAGATCATGGCCAGCGCGTCCAGTACTCGGTCTTTGAATGCGAGGTCGACCCGGCACGCTGGACGGCGATGCGCGCTCGGCTCGTCGAGGCGATCGACCCCGCCACCGACAGCCTGCGGTTCTACTTTCTGGGGCGGGAATGGCGCAGGCGGGTCGAGCATGTCGGCGCGCGCCCGTCCGAGGACCCCGACGATCTGATAATTGTGTGATGCGAACCCCAAGCGGCCGTTCGGCGCTTGAGAGGTTCGCGGGCCTTGTAGACATCTGTTTTGCAAGTCATCGAGGCTTTCTCCGAGGCCGTCAGGAGCCGACCGCACGGAGATTCGCAGATCGCCCGACATTTCCTGTCCGAAAAGAGCATGATAGCCAGACGGA # Right flank : ACACGCCCGAGGGATTGTTCGACTTCATGGCCGCGTTGCCCCCTTTCGAGGGCGAACATGGCCAATTCTGGAGCGATCGGAAAGACGAAGCGATCACCGTCATGCTGAGCCTGCGCGGAAAGCACAGCGCCATCGTCTGCGGCGGATGAGACAGCGGCAATCGGCACGCTGCTCCGCAGCGACCGCACCTCGCGCGAATGTCCGCTCCGGGTCATGGGCCGTCATCCGAAGATACGGCGGCCACGGCCTTCGACGACCGGTCCCCCTGCCCGTCTGCGGTCAGCACCCGCCAGACCGTCGATCGGCTGACCTTAAGTTCCGCCGCGATCGCCACCGGCCCCAGCCCTTGGGCATGCAACTCGTGCACCTTCGCAGCGTCCACCATGGGTTTGCGCCCCTTGTAGACCCCCCGGGCCTTGGCCTTCGCGATTCCCTCCATCTGCCGCTCGCGGCGCAGGTTGGTCTCGAACTCGGCGAACACGCCCAACATGTCGAGGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.20,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //