Array 1 10172-10926 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOOS01000021.1 Jannaschia rubra strain DSM 16279, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 10172 32 100.0 34 ................................ ATCGCCTTGATGTCGCGAGGCAGGCGGCGAACCG 10238 32 100.0 33 ................................ ACGGGCTGGGTCAAGAAAACCGTGCCCGGCAGC 10303 32 100.0 34 ................................ ATCGCCTTGATGTCGCGAGGCAGGCGGCGAACCG 10369 32 100.0 33 ................................ ACGGGCTGGGTCAAGAAAACCGTGCCCGGCAGC 10434 32 100.0 34 ................................ GTTCCTGACTCGTGTCATCGACCTTGGCGGGGTG 10500 32 100.0 35 ................................ ACCGCTCCGGCCAAACCACACACTATACACACAAC 10567 32 100.0 33 ................................ GACCAGACCATTACCGAGGGCGGCGACACGACG 10632 32 100.0 34 ................................ TCGCCCCTCGACATCATGGCGGTGTCGAACCTGC 10698 32 100.0 35 ................................ GCCCACAAGCCGATGCTGTCCAAGACCCACGCCAA 10765 32 100.0 33 ................................ AGCGATACCTTCGCCAAGGGCGTGATGCGCCGT 10830 32 100.0 33 ................................ AAGGGTGCGTTCGGGGACTATTTCCGGATGATG 10895 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 12 32 100.0 34 GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC # Left flank : GGCACCTGCGCGGCGACCTCGATGCCTATCCGGCCTGGGTGTGGTAGGTGCTGGTCCTGGTGACCTACGACGTGGCCAGTGGGCCCGGCGGCGCCAAGCGGTTGCGGCGCGTGGCCCGCATCTGCGAGGATCATGGCCAGCGGGTGCAATACTCCGTCTTCGAATGCGAGGTGGATCCGGCGCGCTGGACCGCGATGCGCGCTCGGCTGGTCGAGGCGATCAACCCCGCCACCGACAGCCTGCGGTTCTACTTCCTGGGGCGGGAATGGCGCCGGCGGGTGGAGCATGTCGGCGCGAAGCCGTCCGAGGACCCCGACGATCTGCTATTGGTATGATGCGAACCTGGAGCGGCCGTCCGATCTCCTTTGGGTTCGCAAAGCCGCCTGACGGGGGATTTCATAGGTTATGGTGGTATCTATGGGATCCGAGGTACCGCACGACGTGGGGTTCGCAGATCGTCGGATATTCTTGGTTCGCAGCGAGTATGATAGCGCACCGCA # Right flank : CGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCCCCCCGTGCGGGGGCGTGGATCGAAACGTCGCGATAGCAAAAGATGATCGTATCGGCGTCGTCGCCCCCCGTGCGGGGGCGTGGATCGAAACTTCGATATCGAAGATCGGGGAATCAAGGGCGGGGGTCGCCCCCCGTGCGGGGGCGTGGATCGAAACGTCCGCGAGCTAGAGGATCGCGCCGACGAACGCGTCGCCCCCCGTGCGGGGGCGTGGATCGAAACATGGTCTCGGCGTGATCGGGTCTCCGACCTCCGGTCGCCCCCCGTGCGGGGGCGTGGATCGAAACACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 13111-13406 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOOS01000021.1 Jannaschia rubra strain DSM 16279, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 13111 32 100.0 34 ................................ GGATCCGCCACTACGCCGCTCTCGCCCTCCTGGC 13177 32 100.0 34 ................................ AAGGGCGGCACGGTCCGTCGCTCCGGGCGGATGC 13243 32 100.0 34 ................................ CTTGGCGGTGCGCTCGGACCGCGACAGGATGGTC 13309 32 100.0 34 ................................ ATTGGCGTTTTCCATGCTGGACCGGATGGCATTG 13375 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 5 32 100.0 34 GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGTTCTCCGTG # Right flank : CGCCGCCAAGCCGCGCGGGATGACTGGTTGGAAACGGTTCGGGCGTCACGGAAGGGTCTGTCCTACCGTTCGAGGCGCCAATCCTGGCGGCTCTGGATCCTCGTGGAACCTCGGGCTTAACACTATTGTCCATAGTGTTAAGCGCATGGAACGCCATCGCTGCACCAAGGGGCAGAGCAGGGGGCTTTCCCGCTTCCGCACTTAACAGTTTTCGGGCATCCTGTTCACATGAGCGAAATGCGCCTCCACGACACCGCCGGAAACCGGCTCTATCTCAACGCCGAGGAACGCGCCGCTTTCCTGGCCGTAGCCCGGCGCAAGCCTGCGCGGGATCGCACACTCTGCGAGACGCTGCTCTTCACCGGCTGCCGCCCGTCAGAGCTGCTGGAGATCACTCCGGCCCGGGTGGACCTGTCCGGCGGTACGGTCGCTATTCGCAGCTTGAAGAAGCGCAAAGATGCCTCCGGCGTCTCGAAAATTATCTACAGAAGCGTTCCGGT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //