Array 1 169280-167341 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKNH010000007.1 Fusibacter ferrireducens strain Q10-2 NODE_7_length_304139_cov_41.053829, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 169279 30 100.0 36 .............................. TCTAAAATTGTGGAACAAATTGCAAAAGAAATGCAT 169213 30 100.0 35 .............................. GATGGAATTAAGACGTTTGGTCCGGGTCTTACAGG 169148 30 100.0 36 .............................. TTCACAACAGCGTTATACCAAGTAGCCCCGCCAAAT 169082 30 100.0 35 .............................. AGATGAATCTGTTCCGGAAAATTGCAAACTTATAA 169017 30 100.0 36 .............................. TTACTTCTCTATCTTCCGTAATAGCTTCATACAACG 168951 30 100.0 37 .............................. GATGTTATAGGAGATTTTAGAAACATGAATTTTGAAG 168884 30 100.0 35 .............................. AACACTCCTGTCACAGTAGATTCAATATCAATAGG 168819 30 100.0 36 .............................. TTTTATAAACCTTTAACGGGCATATCGCAAAATTAC 168753 30 100.0 36 .............................. GTATGAATGTGGTTTGTTTACCACAATTGTTACATA 168687 30 100.0 35 .............................. TCTACCATTTCAATTCCTGTTTTAGGAAGTTTATC 168622 30 100.0 36 .............................. AAGAATGCTTCGTTGGCTACGCTATTAAGAAGTGTT 168556 30 100.0 35 .............................. ATAGTTAAATTATCTATCCCCGTTGGTGTTATTCT 168491 30 100.0 35 .............................. TGAACTCGTTTTGTTATAACAGACTGCTTTACTGC 168426 30 100.0 36 .............................. GCAAAAAAAGGCCCCGGATCTATTGAAAACGGAATA 168360 30 100.0 36 .............................. AAGGTTAACGGATCAAATAAATTCCCAAAACTTAAA 168294 30 100.0 35 .............................. AAAGATGAGGTTAGTATCACTGTTAACGCACGTAA 168229 30 100.0 38 .............................. AACTATTGCCAGCATTGTGGGACTAAAATAGATTGGAG 168161 30 100.0 36 .............................. AATGTTTTGTCGTAATTGCTTGTTAACCATGAAAGT 168095 30 100.0 36 .............................. GAAATTTTCTTTGCTATTAGAAGATACGCTGTTGCA 168029 30 100.0 37 .............................. TGGTTAAAATATTCAAAGGAATGATCGGGTTGACTGG 167962 30 100.0 36 .............................. TTTATTATGCTTGTTCTGTCGTTTATAGCAGTTTAT 167896 30 100.0 36 .............................. GTTGAACTTTATTAATATTCTTGATACATAATACTA 167830 30 100.0 36 .............................. ATATTTTAGCTTTAAACTCATCAAACCATTTCTGTC 167764 30 100.0 36 .............................. ACTTTTAGAAGGAATTATAACAGAAGCTCAATGGAT 167698 30 100.0 35 .............................. TTCATTTTTACCTGTTTTTACTACTTGTGAGGCGT 167633 30 100.0 36 .............................. AGAGTTAAACGGTCTATAGACAAACTTGTTGAGTGC 167567 30 100.0 35 .............................. ATAATAACACTGCTAAAGAATTGATCATAACAAAT 167502 30 100.0 36 .............................. GCATTCACAAGGATCTTTTCAGCCACTTTTGACACA 167436 30 100.0 37 .............................. GACCTTAAAGGCTACCACGAACCCATCAAAAAAGCCT 167369 29 93.3 0 .........................-..C. | ========== ====== ====== ====== ============================== ====================================== ================== 30 30 99.8 36 GTCTTAATTGAACCATATTGGAATGTAAAT # Left flank : ATCAAGGATTTAAGATTTGGTGGTAAAATGAGGTGAGTAATGTATGTTGTGTTAATTTATGATATTAAAATGGACTTAGATGGTCCAAGGATCTGGCGCAGAATTTTTAAAATTTGCAAGCGTTATATGTCTCATATACAAAAATCTGTTTTTGAGGGTAATTTGTCCGAACTTGAATTGATGAAATTAAAAAATGAACTAGATCAGTACACTCGTATGGATAGAGATTCAGTCGTGATTTTTATAAGTCGAAATGAGCGATGGTTAGAAAAAAGATTTTGGGGTGTTGAGGATGAAAAAACCTCTAATTTTTTATGAAAGATCATTGTCGACCTGTAATAGCGTATATTTTCTAGGAGATCGACAATGTGATGTTTAAAGGTCTTGAAGATTAATAAGGAAATGTGGCGCTATTAAATGACTGTTATGGATACTCAAACTTTATGATCGACAATTTTAGTGCTTGAATGCCTGTCTTTTCAATGCGTAAAATGCGACGG # Right flank : ACTTAAAACATTTAAGAAATTGGGATTACTGAGCAAAATGATCTAATCTATATATCAATAACTGATAAGGTTGTTGCTAAAGTAAAATTTTGAATTGTCATGTCAAAACTAAGTTCATCAAAAATGATTGAATTGAAATACAAGATGAAAAGAAACTTAAGATAATAGACTATGTAAATATTTATTGATGTAAACACAATCAACTTAGATTTTTCCCAACTCATGGATAGATTGTGCTAGTTATTGGGTAAGAATATTTTGAGACTTATGAACGTATAGAAAGGGAGGTGTACATGGAAAAATTATTTATACTTGGAGACAGTGGACTTGTGGGTAGTGCTATTATAGAGCTTCTAAAAGAGGACTATGATATTACGGGGGTTTCAAGGGATCAAATACCGAAAGCCAAGTGGAAGCATTTGAAATTTGATCTTGAATCGGACCAACTGTTGCCTATATTAGAGGCGACGCAGCCCAGTGTTATTATTTCATGTACAAGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATTGAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 297452-298409 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKNH010000004.1 Fusibacter ferrireducens strain Q10-2 NODE_4_length_403834_cov_43.876603, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 297452 30 100.0 36 .............................. ACTTACATTGTTGTTACTAGGTGCGAAGACGACAGT 297518 30 100.0 36 .............................. TAAAATGCATTGTGTCTGCGTATTCGTCTAACAAAA 297584 30 100.0 38 .............................. CAAAATGGAATAAAATAGGTTACAAACAAGTGGGTATA 297652 30 100.0 36 .............................. GTGGACAAACATAAGAACAGTAAGAATGACAATAGA 297718 30 100.0 36 .............................. CCATCATTAAGCGGTTTTACAACAAGGTTGTGAAGT 297784 30 100.0 37 .............................. AATCATAGCTTGTGGTTGGTCTTACTCTTATATTATA 297851 30 100.0 36 .............................. GTTTTAATATACCGATCCTTTTCTTCTTGCGTCATT 297917 30 100.0 36 .............................. ATCTGAGTGGATATCCCGTTTCATCGTACTGTATAA 297983 30 100.0 36 .............................. ATGCAAAATCCATCGATATCAGCAACCATAACTTTC 298049 30 100.0 36 .............................. TCCATACAAACCACGTTGAGAACAGCAACACCATCA 298115 30 100.0 36 .............................. AAGGATCTAATAAAGTTATTAAGTGATTTTTGAAGA 298181 30 100.0 38 .............................. CTAAACACTTTAATCATAGTTCCCACATTTTCTTCGCC 298249 30 96.7 35 ........T..................... TCGAATTGAATTCAGCTTCTGTTTTATTGAAAGCT 298314 30 100.0 36 .............................. TACTTACTTTCAAGCATCTCTATGGTCTCTTTGCTG 298380 30 83.3 0 ...........G....C........A..CA | ========== ====== ====== ====== ============================== ====================================== ================== 15 30 98.7 36 GACTACACCCTACCATGTAGGGAATGTAAC # Left flank : ATGTAGATCGAGTAATAATGATTAATGTGCATGTCCAGAGTGCTCATAAAGCAAGTGATGGTGACATTAGAATTTGTAATAATCATAAGCCAACATTAGAACGCTATTTCTTTTTAAATTCAATAAAGTATTTATTAGGAAATAATAAATTGGTATTGATAAATTTTAATGGGCTTTATGAAAATGAATTAACAGTAATTTATGATTATAAAGATAAAAATCAGGAAGAAATTAGGATTAATGAACGCTCATATGAGATAGACACAAATCAGAAGTCGTCTTTTAAAATGCGATATATTAAAGTCGTAGAGTAATGATATAAAAGTTTGTCGACCTCGAGTAACGTAAAAAGGACTGGGGATCGACAAGCTCTGTATGGATTCATTTGACTCACTTTAATATTTAGTGGATTGATGAGACGTGCTAATTCTGTTAAAATGAAGGTGGTCGACAAAATAAGACCCCTTAGCCGTTGAAAATAGGCAACTAGAAATCAACGG # Right flank : AAAATACGCACTGATAGCCATTTGATTTTTGAGAACTGCACTTTATCTTATAGAAAAATAACTTTTTCATCTCCAAGTTTGGAGGGGAGAAGTTTTTTTGTTTTAGAATTTGAAAAGAAAATAGTATAATTAGGGAAATAATATGAATTCATGAAATGTAAAAGAGTGGAGTTAAAAAAATGTGCAGAATTTTGAATTAGGAGAAATACATAATGTCTATATCAAAATATTGGGATTGGACGCAAGTGAATAATAGTGTATGGCGTGAACCTTGTGAAGAAAGCCATTATTAAGTGTATTTTTGAAAAATCCTCTTACGTTACCCCTTCCTTGTGACGTAGCGTAATGCAGTAAGATGATGCCAAGGAGGTGAAATTTATGTCAAAATATACGACCGGAGAAATGGCTAAATTGTGTGATGTTTCGGTTCGGACGGTTCAATTTTATGATACAAAGGAGTTGCTTAAGCCGGCCGAGCTTTCTGAGGGTGGTAGGCGCCT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACTACACCCTACCATGTAGGGAATGTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.90,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //