Array 1 111786-110455 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKQ010000006.1 Faecalibacillus intestinalis strain DFI.5.2 EJDCEBDI_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 111785 31 100.0 40 ............................... CGATTTACGTGGATGTCACCCATATAAAAGGGTGTCACTA 111714 31 100.0 39 ............................... TAGTCATTAATAATGTCATTATATTAATTAGAAAATTTT 111644 31 100.0 36 ............................... TAAAGAAAATTATAATAAAATATTAAAAAGATATGA 111577 31 100.0 36 ............................... TGTTTATTCCATCTTAAATATGTATACCCACCGTAC 111510 31 100.0 38 ............................... GAATAATAAAAACCCTCATTCCCTTGTTCATCATATAT 111441 31 100.0 38 ............................... TAATCAAAGTACCTTTTTCTTTATCTAAAATACTATTT 111372 31 100.0 38 ............................... AATAGTGCACTTCCTGCTTTTCTAGTGGATGGATAACT 111303 31 100.0 36 ............................... TATTTTTCCTTCTTTTACAATTTGCTCTGTATTCTC 111236 31 100.0 36 ............................... CAGTTTTGAACACATTTTCAAACTTAACTAATAACT 111169 31 100.0 36 ............................... CTATACTTGGTTCTAGTTCATTCATTACTATATATC 111102 31 100.0 36 ............................... TGTTGCTAATAATATTTCCTTATTTAAGTTTGCTTC 111035 31 100.0 38 ............................... ATTATCGGCGCTTGATTGTACTTTTCTTAATTTCTTTT 110966 31 100.0 37 ............................... TATTTTTACTTTTCATATATTCATACTCTTTTTCTTT 110898 31 96.8 37 ..........................G.... AATTTCTATTGAGCCGTCGAATTCATCAATAACTTCA 110830 31 100.0 37 ............................... ACTGGTTCAAGAGCTTGTTTTAATTTACTTATTGTTC 110762 31 100.0 38 ............................... CAATTTTATTTTCATCTCAGATGTTTCTCCTTACATTC 110693 31 100.0 37 ............................... AGACTTCCTAAGATGTTCCAATCAGCATCAGCTAATA 110625 31 100.0 41 ............................... CTATATTTACTTCACAAAAATCAACATGCCATTTTACTTCT 110553 31 100.0 37 ............................... TCACCATCATTGACTAGCTGCTTTACTTCTTCTAGCG 110485 31 83.9 0 .......................C...TTTT | ========== ====== ====== ====== =============================== ========================================= ================== 20 31 99.0 37 GTTAGATATCATACTTATTAAGGATTAACGC # Left flank : TTTTCTTTATCTAAAATACTATT # Right flank : TATTTCTATCTAATAATGAAAAAACTATATTTTATGTTCTTCTTTTAGTACAATGAAGTTATAAGAAAAAGGAGAAAAGTATGAGTAAAATTGTATTTTTAGATGTTGATGGAACTTTAATTGACTATGAAACAAAGTTACCTGATTCAGCAAGAAAAGCTGTTGATCAAGCCAGAGCTCATGGACATAAAGTCTATATTTGTACAGGTTGTTCTAAAGATGAAATCTTACAAAGAAATCTATGCGAGCTAGATGGGATGATTTTAGGAAATGGAACATACGTGGAAGATCATGATCATGTTATTATGCATCAAGCGATGCCTTTAGAAGAAGTAAAAAAGGTGGTTCATTGGTGTCAAGAAAGAAATCTTGCTTTTTACTTAGAAACAAATAGTGGGGTTTATTGTAATGATCAAATGATTAAAGATGGACCAGCTGTCATGATTAAATACGGTCAAGGTAAAGGTGCAGATCTTTCAAATGCAACAGAAAAGGCAAAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGATATCATACTTATTAAGGATTAACGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 34544-34957 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKQ010000030.1 Faecalibacillus intestinalis strain DFI.5.2 EJDCEBDI_30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 34544 36 100.0 30 .................................... ATTTTTGAGTTTTTTATTTTCATACACTAA 34610 36 100.0 30 .................................... AGAAACCGTCAACCGAAATAGAGAAGTGCA 34676 36 100.0 30 .................................... TATTTATCGAAGAAGAACCAAAAGTAGCAG 34742 36 100.0 30 .................................... CGAAAAAGCTTTTATATCATTGTCAAGTTG 34808 36 97.2 30 ................G................... TATCAGGATGTTCGATTAAATAATTAGATA 34874 36 88.9 6 .....................T....TC.......A TCCATA T,AAAT,G [34891,34901,34909] Deletion [34922] 34922 35 75.0 0 ......T...T.......A......-AA..A..T.G | A [34937] ========== ====== ====== ====== ==================================== ============================== ================== 7 36 94.4 26 GTTTTAGAGTAGTGTTATTTTGAATGGGTACAAAAC # Left flank : TGATAAAAGTATTATTACAAAATTATATAATAAATTGTTTAAAGATATTATTTCAAATAGTGAAATTGATAATGAATTAAAAGATAATTTTATGAATATTTCAAAAATTTTATATGATGAGATAGAAAATTATAATATTGATATTAATTTAAAAGAAGATATTGATTTAATAAAATATTTTAAATTAGTAAGAATAGAATTTGAAAATGAGTATAGGAGTCTTTTTGATAAATTTATTGATATATTAGAAGTTTATTCAGAATTGTATGATCAAACACTGATATTTATTAATGCTTTATCATATTTCACAAATGAAGAAATTAATGAAATATTAAAATATATAACTTATAAAAAAATAAGTGTTTTATTTTTAGAAAATAGTTATAATAGAAGTGTGTATTTTGAAAATGAATATATCATAGATAATGATTTCTATGATTACACTGTTCATAATAACGGAAGTTAACGTTGGCTTTTATACTATTAAAACCTAATTTGAG # Right flank : AATCCAGAGATATTTATCTCTGGATTAAATGTTAATATAAAATAAAAAACAACCCGAAGATTGTTAATTATCAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACATTGCTTACTTTCAACTGCTCATATATATTATCATGAATATGAAATGATTGCAATAAAAAATTACAATTTTTTTAAAATTTATATTTTGAAGAGATATATATAAAATAAAAAACAACCCGAAGGTTGTTGTTTATTAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTG # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.43, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTAGTGTTATTTTGAATGGGTACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //