Array 1 249165-252543 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKOM01000003.1 Klebsiella pneumoniae strain EuSCAPE_IL025, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249165 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249224 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249285 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249346 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249407 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249468 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249529 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249590 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249651 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249712 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249773 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249834 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249895 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249956 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250017 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250078 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250139 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250200 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250261 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 250322 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250383 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250444 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250505 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250566 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250627 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250688 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250749 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250810 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250871 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250932 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250993 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251054 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251115 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251176 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251237 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251298 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251359 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251420 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251481 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251542 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251603 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251664 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251725 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 251786 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 251847 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 251908 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 251969 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252030 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252091 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252152 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252213 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252274 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252335 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252396 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252457 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 252515 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 56 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //