Array 1 11755-8738 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYUQ02000031.1 Halomonas sp. SL1 HAL_S10_001_contig_31_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11754 29 100.0 32 ............................. TCCCAGAACGGCTCACAGGGCCGCTCTGGGGC 11693 29 100.0 32 ............................. AAAAAGCTAACCTTGAGAAGTCCTTTAAAGAA 11632 29 100.0 32 ............................. CTGGCCAGCTGGTGGGGTGCCGGCCAGGTCTC 11571 29 100.0 32 ............................. CCCGGTCCTCGCTCCCCAGCGCGCCGGGCTTC 11510 29 100.0 32 ............................. TAGCCGCCTCGGGCACCTCGGGCTTTGGCGTC 11449 29 100.0 32 ............................. TCACCGCGCGCAACAAGGGGCCGGCCGGCAAT 11388 29 100.0 32 ............................. GCGGCCAGCCGCTCGCGGTTATCGACCAGCAA 11327 29 100.0 32 ............................. GCACTTGTGCCTTGAGCTGGCAGGAGGAATCA 11266 29 100.0 32 ............................. CCGGAGGTGCCGCCGGCCACGCGCTTGCAGCC 11205 29 100.0 32 ............................. ATCGCGCCCAAGGTGGGCGTCACAGCGGACCA 11144 29 100.0 32 ............................. GACTCGCTACGCACGATGATGGGCCTGGTGTC 11083 29 100.0 32 ............................. CAGGAGTGGAATGGCGAGGGCCTGCCGCCGGC 11022 29 100.0 32 ............................. AAATCTGTGGTCGATAACCCAGGCGTCCGTCC 10961 29 100.0 32 ............................. CACCCCATTCGGCAGGCGCTTCTTCATCGTCC 10900 29 100.0 31 ............................. TTCTTCGCCGACTTCTACCTGATCTACGGCG 10840 29 100.0 32 ............................. TTGTGGCCATGCTTGTGGCCATGCCCGTTCCA 10779 29 100.0 32 ............................. GCGGGGGGGACGGTCACGGCGGGGATCGCCGA 10718 29 100.0 32 ............................. TAATAGTCGATGACTATTGGGATTATTGTTTT 10657 29 100.0 32 ............................. GCAAGAGGAAGAGCGACGTTGCCGATGCTCAT 10596 29 100.0 32 ............................. ATGGCATCGACTACGGAATCAGCAACGCGGAG 10535 29 100.0 32 ............................. GCGGATATCAGCACACCCTATGCCAGTTTCTG 10474 29 100.0 32 ............................. TCTTCGCGGCCCCTGGGCGCGGACTTATTTGA 10413 29 100.0 32 ............................. TCCACGCGCTGTTGCTTGCCGCCGTGGCGATA 10352 29 100.0 32 ............................. CCGGCGGCGCCATGTCCGATCAAGTCGGAATT 10291 29 100.0 32 ............................. CCCGAGCTGATCGACGCCATGATCGCGCTGGA 10230 29 100.0 32 ............................. CTGGCCGGGCTAATCAATCCACTGGCCGCGAT 10169 29 100.0 32 ............................. GTCTGCTGCGAGTAGTAGTTGTACGACTCACG 10108 29 100.0 32 ............................. CCTGCCGAGTGAGTTTCCAACGCACCCAGAAG 10047 29 100.0 32 ............................. AGATGAAGGCCAGGTTCGCCAGCAATAATCAA 9986 29 100.0 32 ............................. AGGAAACGAGCTATGGGACGACGTGGCCGCCT 9925 29 100.0 32 ............................. CGAGGCGTTGGCGTACTCGACAATACTCTCCT 9864 29 100.0 32 ............................. TCGACGCGCCCTCATCTCGGTGAACCATTCGG 9803 29 100.0 32 ............................. GTGAAGGACTACAACGATTACACCGTGTTCAC 9742 29 100.0 32 ............................. GGGTCAGGCTCTTGTTCTTACGGGTAGCTGAG 9681 29 100.0 32 ............................. CCGGCCGAGAAGGGCGGCGACACCAAGCCCGC 9620 29 96.6 32 ............................A GCCCCGTGGTTGGGCTCTTCATGGGTGGTGAT 9559 29 100.0 32 ............................. CTGCGTCAGCTGGTCATGGAGCGGGATCGCTG 9498 29 100.0 32 ............................. TGCGCCGGCCGTAGACCAGCTTCCCGTTCACA 9437 29 100.0 32 ............................. GTGGCGCTGTCCACCTCCTTCTGGGCCTCGAG 9376 29 100.0 32 ............................. TGCTCCTTCGAGTTGTGCTCGTGGCCGATGAA 9315 29 100.0 32 ............................. TATCTCAGCGGCCCGAATTCCGACTTCATCGG 9254 29 100.0 32 ............................. GGTCAGCCGGTGCGCCCGTGGCGCGTGGTCAA 9193 29 100.0 32 ............................. TTAACGGCGGGCTCCACGGGCTTGGTGATGTT 9132 29 100.0 32 ............................. CGGTCGGCGTCGGGGCGCCCTGGCCCTGGTGG 9071 29 100.0 32 ............................. ACGCCGGGCTCATAACCCGGAGAAGTCGGTGC 9010 29 100.0 32 ............................. GAGCTCGACACTAACCCCGTCGCCGGCGAGCG 8949 29 100.0 32 ............................. TCGCCAGCGAGCTCAGATATAAGGAGACCGGC 8888 29 96.6 32 ..A.......................... TCCCGGGCCTCGATGGCCAGCCCCATCAGGTT 8827 29 93.1 32 .............A...........G... TTCCACAAGGATAACGGCATCGATGCGGTGCC 8766 29 72.4 0 ...A.........A.......CGCT.G.C | ========== ====== ====== ====== ============================= ================================ ================== 50 29 99.2 32 CCGGTCCCCGCAGGCGCGGGGATGATCCG # Left flank : GGCGACATCGAGCCACCGCCGCCTGCGCCCGAGGCCATGCCGCCGGCGATTCCCGAACCGGATTCCGTCGGCGACCAGGGACACCGGAGCAAGTGATATGGCGATGTTGGTCGTAGTGACCGAGGCGGTGCCACCGCGCCTACGTGGCCGGCTCGCCGTCTGGCTGCTGGAGATTCGCGCCGGTGTGTATGTGGGGGATGTCACCAAGCGTGTGCGTGAGATGATCTGGGAACAGATCAATGCACTGGCCGAGGATGGCAATGTCGCGATGGCCTGGGCCAGTAGCCATGAATCGGGCTTCGAATTCCAGACCTATGGCGCCAACCGGCGTGAACCGGTCGAGCATGATGGACTGCGGCTGGTGCGTTTTCTGCCGCCAGAGCCAACTGGCTGATTTTTCAGGATCTTTAACAATATAGTCTGATCAAAAAGTAAGCAAAATCGCTGGTGGAAATTCCGCTGGCGATTTTCCTCTTTATAAACAAGTGGCTACAATTAGT # Right flank : AGTCAGGCTAATGGCACGTGGCAATCTGCCCGTAGACGCCTTGAGGCTTCGAGCCTCCCTTACTCCACCAGCCCGTTCAACCGATCCGGGAAGTTGGTGAACATCCCGTCCACGCCCCAGTCGAGCAGGCGCTGCATCTGCTCGGGGTCGTTGATGGTGTAGGGGTGCACCAGCAGGCCGTTGTCGTGGGCCTGTTCCACAAAGCCGGCGTCGATCACGCCCTCGCCGTCGTAGACGACGTTGGGGCCGATGCCCATGGCGTAGTCGGCGATGGCCTGGAAGTCGGCGTCGTTGATCTCGGCGGGCGGCGGGGTCACCCCGGTCCATTCGGTCAGGCCGCTGCCGTCCTCGGCGGGGGAGTACCACACCAGCTGTACCAGCGGGATGTCGGCGTTCAGCGCGTGGACCTGCTCGAGGCTGTCCTGGCTGAACGACTGGATCACCACCGAGCCGGAGGCCACCAGCCCCTCGGCCTCGAGGGTCTCGACCAGGGCACGCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGGTCCCCGCAGGCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //