Array 1 273875-273616 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845663.1 Thermoflavimicrobium sp. FBKL4.011 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 273874 37 100.0 36 ..................................... CTTAATTCTGGAACTCCTTCAAGGGTTGGCTTTTAT 273801 37 100.0 39 ..................................... TTCATTTGCTTGAACTTGTTCAGCGGGTATCCATTTAAC 273725 37 100.0 36 ..................................... CGGGCCCAAGCTACCAGTGTCATAGTCGCAGCGGGT 273652 37 94.6 0 ..................................T.T | ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 98.7 37 ATAACAATAGAAAACACCTCATTAAGAGGATTGAAAC # Left flank : TGTTGATGGATGCCCACAATGCTATACACTACACATTTGGGAACTTAATAAACCGGAAAAATGTAGAAGATGTTTTTCACCTCTTAACGAAAGTAAGGATGACTTCGGAGAGCTCAAAGTCCATCACTGAAGAGAGGTTGTGTCGAAAAATTCATTTTGTTTTGGTTGGAAATTTACTCTTTCTTCTTCTGAAGAAGTATAGTTATGTGTATTTTCACGTTTTATGACCCATGGATATAGCTTGGATCATTGTTAATCTTGATATTCAATTTGGAATAGTGTAATCTTTTAGTTAGAGGTTTAGTAGCTTTGCGAACACCATGAGCTTCGGAAAAATCCCAAGGGGTGTTCGGAAATGCGAAAGTCCCTGTTACATAAGGGATAGATAAATTGTCAGACAGCTCTTAGCGATGTAAAGGCACCTTGAAAAGCCGAAAAAGGAGAGGTGTTCGGAAATGAGCTTACAAAGCTAGAAGTAACAAGGTTTCCAAACATCTGCT # Right flank : TTTCTGACCTCTAAAGCTGTTTTTTAGCTCTTAGTATTAAAACCAAAATGGATTCTTTAGTTCTTTGTCTAAAAATCCTATTAAGTCTTTTTGATTACAAAAGAGAGACTCTTCCCAAGATAAACTAAACAGCATACTACAAAACCCATCTCCCAGTACAGATGGGTTTTGTATTTTTCCAAATTACCGATATAATGGAAATATCTAGTATATTATCCATACTTAAGGTGATTGCATGAAAAGCAAATACGCTGTGTATGTGCGGGTGTCAACGGATCGGGATGAGCAAGTATCCTCCGTTGAAAATCAGATTGACATATGTCGAAACTGGTTAGAACGGAATGGATATGAATGGGATGAGAACGCGATTTATAAGGATCATGGCATTAGTGGGACTTTGTTTTTGGAACGCCCAGCGATCCAGTTATTGCTGGAAAAAGCGAAGAAGAAAGAAATGGATATGGTTGTCTTTAAGTCCATTAGCCGTTTAGCTCGGGACT # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAACAATAGAAAACACCTCATTAAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 277484-277300 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845663.1 Thermoflavimicrobium sp. FBKL4.011 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 277483 37 100.0 37 ..................................... GAAAATCTACAAGTACAAAACGCAGGACTAATAATTA 277409 37 100.0 36 ..................................... TTTGCTACTTGCTCTGCATCAACTTCCTTTAAAACA 277336 37 94.6 0 ......................C.....A........ | ========== ====== ====== ====== ===================================== ===================================== ================== 3 37 98.2 37 ATAACAATAAAAAACACCTCATTAAGAGGATTGAAAC # Left flank : AAGTATAACCGCTGGAATTCAAGAACGCTATCCAGAAATGTGAGAGTTTCGAATAGATGTTATAATACACCCAATTCGGTAAAAACATAGCCTTAGAGGAGGATTGGCTATGGATCAATGGCAAGATCATCAAGAATTCACTATAGACTTAGATAAAAAATGGTTTGTTAGTATGATATCGAGTTATTCATAAAACCGATTTACTGAGAATTGCCGGGTGGATTGGCTTTATGGATATAGCTTAAATCACTGCTCGACTTGATATTCAATTAAGAATAATGTAATCTCTTAGTAAGAGGTTTCGTTGCTTTGCGAACACCATGAGCTTCGGAAAAATCCCAAGGGGTGTTCGGAAATGCGAAAGCCCTTGATATGTAAAGGATAGATAAATTATCAGACAGCTCTTATTAGCTAAAATTTGCATGAAACAGCCAAAAATGGCGAGGTGATCGGAAATGAGCTTACAAAGCTAGACATAACAAGGTTTCCAGACATCCGCT # Right flank : ATTGTAGCGCCTATTGCTATCTTTCCGTCTTGCTCGTACTCGCTGATATATCTGATCTAAATAGACTTTGTGACATAATTTTTATTGTGAAGCTACATTAAAAAAGCTTATTTTTCTGTAGTGCTCGTAAATGAGCTTGAAAGTCCTTTTGTGACAAGGAATTGAAAGCTCTACACTTAAAATAGAGTTGAGTCTATTATGAAATTGAAACCTAGTTTTATTACCTAAAGTAATGGTGGACACATCCAAGATAAACTAAATAAAAACAATCAAAACCCATCTGTATGGTTAGATGGGCTTTGATTGTTTTTAAATAATTACTATAATGGAACGAAATTCAATGATATCCATATTTATGGTATTTGTATGAAAGTCAAATACGCTATGTATGTACGGGTTTCAACGGATCAGGATGAGCAAGTATCCTCCGTTGAAAATCAAATTGTCATATGTCAAAACTGGTTAGAACGGAATGGATATAAATGGGATGAGCATGCGAT # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAACAATAAAAAACACCTCATTAAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 284050-283487 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845663.1 Thermoflavimicrobium sp. FBKL4.011 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 284049 36 100.0 30 .................................... TTACCACCTAAAACACATAAATTTTTTACA 283983 36 100.0 30 .................................... CTCCAGTTCGTTCTGGTAATAGAACAAATC 283917 36 100.0 30 .................................... GATTAGAGAGGCGAATAGTTAAATCTTGAA 283851 36 100.0 30 .................................... CTAGAATGCGATATGCTTCTGATGGAAAGT 283785 36 100.0 30 .................................... TTCAGACTGTGAGGGTTTGTTTTTTTTGTT 283719 36 100.0 29 .................................... GGATTACCTAAATCATTTGCTAAAAATAC 283654 36 100.0 30 .................................... GTGTTAAAGTCGTAAGTTTCGGGCGCATCG 283588 36 100.0 30 .................................... AAAATATTTGACAATCCATTTGACCCTAAA 283522 36 97.2 0 ....................A............... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 99.7 30 ATCATATCATATCGAACTTCGTTAGGGAACTATAGC # Left flank : AAAAGCTTTGTTACTGCATGTAGGCATGATGATTTTAATCAATTAAAGCTTCCTCAGCTTTTACCTTTAACACTTCATAAATATGAGTAAATTTATGAGAATTCTAGTTTTCTTTGATTTGCCAGTAGCTAGGAAGTCAGACAGAAAGCAGTATGCAAAGTTTAGAAAGTATCTTCTGAATGATGGGTATGATATGATTCAGTATTCGGTCTATTGCCGAATTTGTAATGGAAATGATGGGATGCAAAAATATCTAGAACGTTTAAATCGTAATTTACCACCGAAGGGATCCGTACGTGTACTAACTATTACAGATAAACAATATGCAAGGATGAAATTACTGGTTGGACTACCCACTCCCACAGAGAAAAAATTAAATTCGACACAGCTTTCGCTTTTCTAAAAAAGAGAAAAATGATAAGGGAGTGATGGCTAAAAACTTGTTTTTTAAAAAGAAAATCCCCTGTAAATATAGGATTCACAAGGGATTTCGAAAAGGT # Right flank : ATCACAAACAGTTGTATCTTATTATTAATGTATCACTTCTATTCCTGTTTTCTTAAAACATCTAATGTAGCTTCTAGTTGGGCTATAATAAGCACTTTCTTGTCTTCGGGTATGGGCTTGCCATTTAAGGTAAGCTCTTTTACTTTAAGTACTTCTATGATCTCTTCCATAGCGAGATTTCGATTATTTTGGTTGCTTAGACCTGATACCTCATTTATTGCTTTTCGGAGATCGGTTTCTGCGCTTGTAAGGTTATCTACTCGACCGGTTAAATAGTCTAGAGTAACTTGGAAGAAGTCAGCTATTTTATGAAGTGTTTTAAGGTCAGGCTCTCTTGAGCCTAACTCATAATTTGAAATCTGTCCTCTTGTAAAGCCAAGTTTATTAGCAAGCTCGTATTGACTTAGTTTATTTTCTTTCCTTAATTTAATTAACCGTTCTTTAAACATTTTTTATCTCCCTAAGGTCTTAAATTAATTATAGAAACTTAGTGTTTCTAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATATCATATCGAACTTCGTTAGGGAACTATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 4 288973-289271 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845663.1 Thermoflavimicrobium sp. FBKL4.011 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 288973 36 100.0 30 .................................... TCTTGGAGATGCAGTTCCAACTGGAGATTT 289039 36 100.0 30 .................................... CTCTATCAGGAGACAGTTGCCACGCTGTCC 289105 36 100.0 30 .................................... AACATACCGCTGCTATGGAATGCTCAAGAG 289171 36 100.0 29 .................................... GGAGCTAATGTTAAACCCGTACTTAGCGG 289236 36 83.3 0 ........................A.A....T.GAT | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 96.7 30 ATCATATGATATCGTATTTCATTAGGGAACTATAGC # Left flank : TCTTCGATACGCTCCTGATCTAAGTTGATAACCGCCCAACCACATGAACTTATCCCAATATCTAGTCCAATTCGGTATTTCATATAAAATACTCCCTTCTATGATCCATAAGTAAAATATTCAATTAAATACATAATTAATTATAACTTAACCCTTTTTCAAATTGTTATAAGCCGATATGTATAAAAAAACCACTATCTTATATTGAAAATTTTCTTTCATCATAAGATAGTGGTTTTTTATTAAACAAATTTAAATGGGGAGTTTTTGGCGATCCCCAACGCCACGGGTCAAAAGCCCTTACTATAGTAACCTAACAAAGTTCGATATGATATGATCATAAACCAGTATACCAATTCGATCCTAAAATAGCAACCATTCATTTCGTACTTATTTTTTTAAAAAAACGACGAAAGAAAAAGAAAATGCACCCTAACACATTCGTTTTTTAGAAGGAAACCCCTTATAAATATAGAATTCACAAGAGGTTTGGGAAAGGT # Right flank : TTTCCTTCTTAATTGTATCCATCACGGTAGCAAATTATTTTTGCAATCCCCTAACTTATTCCCATAAATATACACACCTAGATCAAAAATTTACTCCATACAAAACTTTGGTGTCGCAATCTTCCCAACCATATGGGATAAAGCCAGTGTGCACCATACATTGTGAAAACGTCTTACCTGCATGACAACCAATGCAACCTACTCTTATACTCATGCTACCAACTTGCTTTTTTTACACCTGGAATCTGCCCCTTATAGGCTAGATCACGGAAGCAGATACGACAGAGATTGAACTTGCGCAATACGGAATGTGGTCGACCACAACGTCTACAACGTGTATAGGAACGGACTTTGAATTTCGGTTGACGTTGGGACTTCACTATCATCGACTTCTTCGCCATTTGATTCCCTCCCTTTGATGTGGTTTACCATATCATATCACCAAAAATTACTTCATCTACAAATCCACAACAACTATATCCCTGTACAGATTGATGGTA # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATATGATATCGTATTTCATTAGGGAACTATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 128485-128053 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845670.1 Thermoflavimicrobium sp. FBKL4.011 scaffold8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 128484 31 93.5 35 .............................AT TTCTTGAAGACGAACGAATATATCTATTTTTCCAA 128418 31 100.0 36 ............................... ATCACATCATTCAACAACATACAACCCAAAACAAAA 128351 31 100.0 37 ............................... CGTTTTTCTTCCGCTTTTCTAGCCCTTTTGATGAGAC 128283 31 100.0 36 ............................... AAGATTTTTTAGTTTTTGTTCCAGACTTGCCATAAC 128216 31 100.0 35 ............................... GTGTCGGTCGGTCGCAGCTAGATTTTTGCACATGT 128150 31 74.2 36 .......G.....AT......TG....G.AA CATAGTAGACTTTCCCTGACCCGTTTCACCGATAAG 128083 31 80.6 0 ...C..A......G.......TG.....C.. | ========== ====== ====== ====== =============================== ===================================== ================== 7 31 92.6 36 GTATTGGATCTACTATAGAATGAAAACATTC # Left flank : CGCTTCTAGGTGCTCCCGCACGCTTTTCCCACCAACAGTAATCCCATCTGCGATAATAATCGCTGTTTCTGCTAGAGTAAGAGTGCTTCCTTCAATGCTATTAGAATGATAAGTCCACTCAATATCCAATGTTTCTTTGAAGCTCTGCATGGTAATCGGATGGATCGGATATTGTTTGCGGAGCTCGTTTAAATGATCGATTTTTCGCATACCTATTTTCTCCTTGGTATGAATGGATTAGATCCTTATCATCATATCATGGTTTATCAAGTGTTCAAAGAAGTGGATTATGATTTAAGGAAAAGGTTGGATCGATTTGCCGCAAACCTCTTTTAGAGTGGATGTGCCTTGAAGCGAGAAATATCAAGGGATTTGCTCCTGTTTTGACGGAATAGTGAAAACACGACCAGAGGTTTACGGCAAAAAAGGGGTGTTGCAGGAGATGGAGGAACGGGTGTATACTAGGAATAACAAGGAATTTGGTGTGTAGTGAATTTGGG # Right flank : CTCCGAGATCCTTTATCAGAAAAGGGTATATCTACATCAAACTAAAAAATCACCCAAAAAGCCCATCACCTTCGCTCTTTCCGACAGGTGATGGGTTTTTTTGTCGTTCAGAATATCCCAGCTCCAAACCAACTCTATTCAAAAAACATCCATGGTAAACTATATCTAGAACCTTTTCCATCCTAAAAACACTTAAATACAGGAGATAAAGCTATGGTCAAGTTACTGATTGCCGATCGAGATAGCAAGGAAAGAGAAGGAATCAAATGGTTGGTTCAGGCGTATCCGATCCCTTTTGATCAGGTGGAGCTGGCAGGGGATGTGGAAGAGTTAATTCGTATCATGGAGCAGGAGACACCTGATGTCTTATGCATCGAGCTAGATATGGTTCCACGTGACCAGTGGGAAGAGGTTAAGAAACGCATCCATTTTTATGTGCGCCGAGTGATTGGGTTGACAGCCGAGGCGACGTTTGAGCGGGCAACGCAGGCGATTGAACT # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGGATCTACTATAGAATGAAAACATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 111728-111982 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845664.1 Thermoflavimicrobium sp. FBKL4.011 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================== ================== 111728 29 100.0 45 ............................. TGTATGGGGCAAGTTTCACTACCCAAAATGAATAAAGATATCAAT 111802 29 100.0 47 ............................. AGAGCAGACATCGAACAGGAGTTATGCTTTATTCCTGAAATATCAAT 111878 29 100.0 47 ............................. AGAGCAGACATCGAACAGGAGTTATGCTTTATTCCTGAAATATCAAT 111954 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================================== ================== 4 29 100.0 47 AGAAAACACCTCATCAAGAGGATTGAAAG # Left flank : TCATGTGAAAGATCTCATAACGAATCATCCGAACTCTCCGTTTAATAAATCCCTGTTGCTAGCCAAAATCACGGAAAAGGGTCACCAGACATTAACAGAGAATAGCTATACAGTTACCCAAAATGGTGAGAAAAATAAACAAAGTATTGATTCCACTCAGTTTAAACAGTTAAGTAAAGATCAATTTGGTATTGTATTGGAGTAGGTAGGTAAATCACTTTGTGGCTCTGGAATGGTAGGAAAATCAAGTTGTAATTTGAGTAAGAAAAGTGTAATATTTTCTAATAAGAGAAATTGAATTTCCGAACACCCTATGCTTCGGAAAAGTCCCAAGGGGTGTTCGGAAACGTGAAAGTCCTAGATATATAAGGGCTGAACTTAATTGTCAGACAGCTCTTAGCAGCGAAAATATACCTCGATAACCCGAAAAAGGCAGAGGTGTTCGGAAAGTAATCTGTGAAGCCTGTGATATCAAGGACTCTGACGACCGCTATATCAAT # Right flank : GGAGACGCGAGACCATAGAAAGCTACTCGGTTAAATTGATATCAATAGATTAAAACTTAGTAAATCTATTGCTAGTTTGATTACGACTTCAAAGAGTAATGCATATATTCTGAATGGATATTCGCTAGTGAAATAAAAGAATGGAAAAAATGCCATTCTTTTTTTATTCTAACTATAGAAGAATCATTGATTAGAAAGGAAGGGAAACGTGTCAAGGCATACAAATCATCTCAGCCGATTGTTCTCGATAATTGCAGAATTGCTCTTAGACCCAGGACCTTACACAATTAAGGAGACAGCAGAAAAATATGGTGTTACAGAAAGACAAATTCGTAATGATCTTAAAAGATTGATGGAATTTTTAAATGATGCAAATCAAAAAGATTATATTATTCATAGGAAAGGGTTTTATGAGGGGAACTTTTCACGAAGTGTAGCCAATTTAAAACCAGAGGTGCGCTTATATTTATTTCTCGCTCTCAGACAAATAGAGCCGATGT # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGAAAACACCTCATCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 2 122176-122511 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845664.1 Thermoflavimicrobium sp. FBKL4.011 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 122176 36 97.2 37 .........A.......................... GATGAAACAGATATTTATGGCGGTAAATTTTTTAACC 122249 36 100.0 39 .................................... GTGACCGTTCATTACATGTATAACACGGTCATAGATATG 122324 36 100.0 36 .................................... GACAAGTACCTTGCTAGAAAGCCCGCAGCTGCAATG 122396 36 100.0 44 .................................... CCAGAGTAGGTATATCCTAAATCAATCATACTTTTCTTCTCGAT 122476 36 91.7 0 A......................T....A....... | ========== ====== ====== ====== ==================================== ============================================ ================== 5 36 97.8 39 GTATCAATAGAAAACACCTCATCAAGAGGATTGAAA # Left flank : CAAAGTAGGTGAGTTTAAATGAAACGAGTTGTCAGTTATGATATTATTGATGATAAACGTCGAAGTCGAGTGTTTAAATTACTTAAAGACTATGGAAAATGGGTGCAATATTCTGTATTTGAACTAGACTGTAAGGAACAAGAGTGGGTGGCCATTGAATTTCAGTTGACTAAGCTTCTTAAACAAGACGATTCACTATGTATTTATGAGATTTGTAAGAGTTGTAGTCAACGAACATTATATAAAGGAAATGTTTTATTGCAATTGGAAACAGAAAAGTGTAATATTTTCTAATAAGAGAAGTTGAATTTCCGAACACCCTATGCTTCGGAAAAATCCCAAGGGGTGTTCGGAAACATGAAAGTCCTTGATATATAAGGGCTGAACTTAATTATCAGACAGCTCTTAGCAGCGAAAATATACCTCGATAACCCGAAAAAGGCGAGGTGTTCGGAAAGTAATCTGTGAAGCCAGTGATACCAAGGGTTCAGACGATCGCT # Right flank : ACGCCGTATTCTCTTTGGCTACGTTTTGTATAATCCAAGGTGCTGATTGAGACTGTTTTTAAAATTTATTTAATATTTTCTCGACTAAGTTTTTTATTAGATCGTAAGAATTCAAGATTCAAAGTTCAAAACGATTGGAGCTTTTTTATTTTTGGTTAATTAGATGTTTGCAAATAAAATGCCTTATTATATATTAAATTTGTACAACTCTATTTCATAAAAACATAAACAGAAATGAGGCAAGTGTTATGCTGGCGAGAAATCTAAAATGGACACTTGTATTTTCGTTGGCAATTTGGGTAGCGGCAATTTCATTTTTTATCTTTTTTGGACATGTTGTTCTTATTGATCCGGATCAAGAAGGGTTTTTGCTTCGTTTTCTCTTATTGGAGATCATGACAGGTGTGGCTTTGTATGGGGTCATGTTGATTTATCAGCGCTGTGATCACTCCAAAGATGCGGTGATTAAGTTGGGGATTTGGGGTTCAGCGATTGGACTG # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATAGAAAACACCTCATCAAGAGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 3 123483-123816 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845664.1 Thermoflavimicrobium sp. FBKL4.011 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 123483 37 100.0 36 ..................................... TGCGGAAACGCTGGGAAAGAGAAGGGGCTGGGGAGG 123556 37 100.0 35 ..................................... AACAATACTTATGACTACTTTTACGAGGTTATACT 123628 37 100.0 40 ..................................... TGGGATTCCGCGCCATGCTAAGTATCGTCTTGCTATGCCG 123705 37 100.0 38 ..................................... GTCCTCGTTGCTTGCGAAGATTGGCTAACACTTTTAAA 123780 37 91.9 0 .......C.G............C.............. | ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 98.4 38 GTATCAATAAAAAACACCTCATTAAGAGGATTGAAAG # Left flank : GGGGATTTGGGGTTCAGCGATTGGACTGTTTTTAGATAGTTTTGCGATCTGGCACCATTCGATCTTTTTGCCCAATCTTTCAAATGGACAAGTGATGGCCTTTACAATTTGGTTGGGGTGTGCTTATGCACTATATCTTATGATTCCTGTATGGATGCGTCGCGTGAAGAATTAAATATAATGATGTGAAGGATTGACTCATTATTTATATCTAGGGGTTTGTTGTTTTTGATATAACAATATAAAGAAAATCGATTATTGCAAATAGACACAGAAAAGTGTAATATTTTCTAATAAGAGAAGTTGAACTTCCGAACACCCTATGCTTCGGAAAACTCCCAAGGGGTGTTCGGAAACATGAAAGTGCTTGATATATAAGGGCTGAACTTAATTGTCAGACAGCTCTTAGCAGCGAAAATATACCTCGATAACCCGAAAAAGGCGAGGTGTTCGGAAAGTAATCTGTGAAGCCAGTGATATCAAGAGCTCTGACGACCGCT # Right flank : GGTACTTAAAAAACAAATGGTTCTCCTCGAACAGGTCTGTATCAATAGAAAACACCTCATTTTATTTTCGTTGACAATATTACGATAATTATCTCCCCAACCTTAGTTCATCTTCAAATGGGTATGAAATCTTAGTAGAGGGATAGTTGAAAAGCGAATAAAGGTACTTTTTGCTTATAAAGCCTTCTATCTTGCTATTGGACTGATCCAAGTTCGATATGATAGGGGGCTTTTTATATAAACAAACTGTGTTCGTGGGGATTTCATCAATTGGACAAATTAGATTTTCATTTATTCAGCTTCTTCCTTTTTATGTGTTCAGTGATTTCTTATTTAATAGAGATTTCCATATTTATAAATAATAACATTATAATATTATATTCTAAAATAGATTCATATATAGTATAATGATAAGTATAAATAATCTAAATATATATAATTGATAATCGAGGTGGTGATTAAAGAAAATAGGGACAAGCCAATTAGAGAAGTTTGGTTAG # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:0, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATAAAAAACACCTCATTAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 4 161255-161741 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845664.1 Thermoflavimicrobium sp. FBKL4.011 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 161255 29 100.0 36 ............................. GAGGGACGGAGAAACGGGGCAAGAGCTTCGAGCCGG 161320 29 100.0 36 ............................. TCGAGGAGGAGTCACAAGCGCGATCGGCGAGACTGT 161385 29 100.0 36 ............................. GGTGGTCCCATGATCAGCGTGTGCCCTTCTTTGATT 161450 29 100.0 38 ............................. TATATAAACATAACACACGAAAACTTACATAAACTTTT 161517 29 100.0 36 ............................. TTTTTAGTTACCAATGCAGTGATGATATTTTCTTTC 161582 29 100.0 36 ............................. TATAGCATATAAAAGCGTATATAATAATTATGTTTA 161647 29 100.0 37 ............................. GTATGAAAAATTCCTCTCTCTCAAACTGTTTTGTCTT 161713 29 96.6 0 .........................T... | ========== ====== ====== ====== ============================= ====================================== ================== 8 29 99.6 37 GTTTTATATTAACTATGTGGAATATAAAG # Left flank : GCCTCGGAGAACTTGATATCATCGCAAGAGACGGGGAAGCCCTCGTGGTGGTAGAAGTTCGAACAACGACTAGTCAACGCTTTGGCTTCGGATATGAGTCCATCGATATGCGCAAACAGCAAAAAGTGCGTCGATTGGCGCTCCAATATATACATCAGCAGCGGATCACCCACATACCTCTTCGATTTGATGTAGTTTCTGTACTACTCGATCAAGAACGAATTCCAAAGCAGATCGATCATTTGAAAGGAGCTTTTTAGTTTTTTTATTGAATGGTAATAGAGAAGATAGACCCATTTTCCATATATTTCATCCGTTTGCCGTAAACCTCTTTTTGAGGGTATATACCTTAGTTCCTTATATATCAAGGGATTTGATATTTAAATTGACTTTTCAGAAAACAATACTGGAGGTTTACGGCAAAATAGGGTACTTTACAATGTAGCAGATATATGATTAGACTAGATCATATAAGGGTTTTGCCCCGTGTGAAAAATGGG # Right flank : GATATTAATAGTCAAGTCACTCAATCATAATAGCATTCCTATTTTAACTATGTGGAAAAAAGCGCTGATCTTGGGTGTTTTTTCTTTTTGACAAGTATATATAAACTAATTATATTTGATCTATAATTTATTATAAAATTTAAATTAGTGATTATTATAGAGAATAATCTTATTAGCACATCTTGACCGAATAGAGAAATTATATTATCCTACATTCATAGTAAAGAGGTGTTATAAGAATTTGATTCATTGTATTTTATAGGGGGTACTATGAGAATAAAATGTTCATTTATCTGTGATGAAATACCAATTTCTTATCGTATGCTGTTTGTAAGTATTTTAAAAAAGTGTTTAGAGCAAGCAAATGAAGAGTATTTTAATCAGCTATACTACTATCAAAAGCAACATCGAAATAAGAGAAGTAAAAACTTTACCTTTTCCGTATTTCTAAGAGATTATCAATTGGACAAAGAGGTATTTCGATTAGATCAAGGGGAAGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 5 170385-171593 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845664.1 Thermoflavimicrobium sp. FBKL4.011 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 170385 29 100.0 37 ............................. GTAGAAGAGATTACAGAGGTGTGGGGCTTTGGATTTG 170451 29 100.0 36 ............................. CTGAACCCCCTGAAACCCCCAAGACAGCGCACGGGA 170516 29 100.0 37 ............................. GATGTCAATGTCGGAGTCTATGAAGTTTGAAAAGTAA 170582 29 100.0 36 ............................. CGGCTGCTAAAGTAACGCTTCATGTTCTTATCCCTT 170647 29 100.0 36 ............................. ATTAAAACGGAAAATGAGCTAGCGACTTTGGCGAGT 170712 29 100.0 37 ............................. CCAGGAAGCGACGGATTAACTCAGCGACTATCTGTGA 170778 29 100.0 36 ............................. TCTTTAATTTCCGGTCACGATAGGACTTTTGCTTAC 170843 29 100.0 36 ............................. ACGGGAGGAGTCGCAGGGGATGGGGTGGCGGGAGAG 170908 29 100.0 36 ............................. TCTTACTTCCCGTCACCTTATAATTCAAGCGCTTTA 170973 29 100.0 38 ............................. AATAGAATTTCATTTCTTCCCCTTTGTCAACACTTGAA 171040 29 100.0 39 ............................. ACTGTTGTTAGGGATAATTTTGAATGTAAAATAGTTTTG 171108 29 100.0 36 ............................. GATAATATTAAATGTACGAAACAGGGAGAATATATC 171173 29 100.0 37 ............................. TTGCTAAGGATAGTAATTCATTTTTATCCTTAATATC 171239 29 100.0 37 ............................. TTTATAGGTAATTCCATTACAGATTTCACATAACGAG 171305 29 100.0 37 ............................. GAGCTAAAAGTGATGCAGATCATACTTTCTTTTGGCA 171371 29 100.0 36 ............................. ACAGTATCACAGATACGCTTACACACATCTACGAGA 171436 29 100.0 35 ............................. GCAACACGTATCACTTTTATTGCTAGCTCAAACCT 171500 29 100.0 37 ............................. CCTACTCTTATTAGTGTCATTCCCTCTAACAAGCAAT 171566 28 79.3 0 ................AAC.T..-....A | ========== ====== ====== ====== ============================= ======================================= ================== 19 29 98.9 37 GTTTTATATTAACTATGTGGAATATAAAG # Left flank : TTTATAAACCATTGAAAGCATGGTGGTAGTATGTTTGTGATTATTACATATGATGTTGAGGAAAAGAGAGTTTCGAAGGTTCATAAAGTACTAAAGCGTTATTTAACTTGGACACAGAATTCTGTATTTGAAGGTGAAATCACAGAAGGTAAGCTAAAAAAATGCTTAGCTAGTTTGCATAATATCGTAAATAAACAAGTGGATTCTATTCATGTATATAAAGTTCAAAATGCAAAAATGATGGAAAAGACAGTATATGGACAGGAAAAAAACTTCGACAGTATGTTTTTGTAATCTATTCCATATATTTCATCGATTTGCCGTAAACCTCATTTTGTGAAGAAGTAGTATAAAACTAGGCATATCAATGGATTTCACTTATAAAATGATTTTTCAGAAAACAGAACTGTAGGTTTACGGCAAAAAGGAGGCATTTACAATATGATCAATAAGCTGTTAAGCTAGAGAATATAAGGCATTTGATGTGTTTGAAAAATGGG # Right flank : AAATCTAGCAGATGCCTTTTCTCGCTTCTTCAAAAAGCAGAATGACCGCCCAAAGTTTAAGAGTAGAAAGAATCCTATTCAATCTTATACCAGTCAATGCAATTATCCAAAGCAAGGAAAACCAACAATTGAAGTCACGGGAAATAAAATCAAACTCCCTAAGCTCGGTTGGATAAAATTTGCTAAATCTCGAGAAGTAGAGGGACGGATCCTTGTTGCTACGATTTGGCAGAATCGATCGGGTAAATACTTTGTGTCGATCCTTTGCGAAATGAATGTTTGTCCATATATTCCAGTACCCAAAGATAAAGGGGTTGGTGTTGACTTAGGACTCAAGGATTTTATTATTCTTTCTGATGGTAAGAAAGAAAACGCTCCTAAGTTTTTTAGAAAGTACGAGAAACAGCTAGCGAAAGCTTAGCGAGATATCCAATACTTAATCATTTTCCAGAACACAAAAAAGCCCTCGATTTCGCTAATAGCAAATCAGGGGCTTATCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 6 180575-182037 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845664.1 Thermoflavimicrobium sp. FBKL4.011 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================================================================================================================== ================== 180575 37 100.0 38 ..................................... TTTCAATATTGTGGACTAAAAAGGCTAAGGATATTAAT 180650 37 100.0 38 ..................................... AGGTTGCCTCTATCTTGAAAGGTAGTAAAGTATCATAT 180725 37 100.0 38 ..................................... TCTCCAAACTTATCACTATGCCATTTGGCAAAATACAG 180800 37 100.0 36 ..................................... TCTATGTGTAATCGTAACAGTTTACACACATGTTAG 180873 37 100.0 37 ..................................... TATATTTTGCTTCCACATTAATCGGTATCCGCTATTA 180947 37 100.0 34 ..................................... TACTTTCTTTATCTAGTAGATAGGTTCCTTTACT 181018 37 100.0 36 ..................................... TAAATACTCTAGATCGTCGATTCGGAATAAACCCTG 181091 37 100.0 35 ..................................... TTTGCTGCTTCACTTCCTATTTCAACAACGATCTC 181163 37 100.0 37 ..................................... AATGAGTTGGTTCAAAACCCCCCAAGGAGGGGATCAA 181237 37 100.0 35 ..................................... TGAAAAATTAACAGGCTTATGCTATGACGAGTCCA 181309 37 100.0 35 ..................................... GATGTTCCAAGCTTAATAAACTATCATCTGCTGAA 181381 37 100.0 36 ..................................... GGTATAATCAACTAGTAGAGGATTGGAACTACTCAT 181454 37 100.0 38 ..................................... TAGAAGAAATAAAGAATCTACCAGATAGTAGTATAGAT 181529 37 100.0 36 ..................................... TTCTTGTCCAAAATCCCATCCCCACAAATCATAATA 181602 37 100.0 38 ..................................... TATCCTAAAACTAGCCCCGTCTTGGGGCATTGAAGTAT 181677 37 100.0 37 ..................................... ACTTTGTTTTTAGGGTAAACGGTGCTTTCAATCTTTA 181751 37 100.0 36 ..................................... GGGTAAGGCTCACCTGTTATTTTTTGATATTCTTCG 181824 37 94.6 139 .........................A..........C GTAAATAAATGGACCTGAAAGCCCTTGTGTGGTAAGGAGTTTAGATGTATATTCTCTTGAATTGAATCCAAAATGGAATTGAAATGACTGCTTTATCACTAAAAAATTGGCTAGCCAGTTTCCTTCAAAGTAATATATA 182000 37 70.3 0 .A.A....GA.......T.........AA.CCA...C | A [182022] ========== ====== ====== ====== ===================================== =========================================================================================================================================== ================== 19 37 98.2 42 GTATCAATAGAAAACACCTCATTAAGAGGATTGAAAG # Left flank : GTATGCTCTTGAATTGAATCCACTTTGGAATGAAAACACGGACGTATTGTTCCTTCTTTAATAAGGTACTGATCTTGGAAAACATGAATTGAATCCAAGATGGAATTGAAACAAGTAGGAGGATGCCTCCATGAGCTTTTTCCGTCCATGCAACTTTCCATATTTTTCATGGAAGTATACCGCCCATTCGAATTGGTAAGCAATGGAATAGATAAATGTATACTTCTTAGTTAGTTGTATTTGATTAACTATTCAACACTTGATATTTAATTAGCAATAGTATAACCTTTTAGTAAGGAATTCTGTTGCTTTGCGAACACCATGAGCTTCTGGAAAATCCCAAGGGGTGTTCGGAAATGTAAAAGTCCTTGGCATATAAGGGATAAGGGAATTGTCAGACAGCTCTTAGCAACGAAAAATCACCTTAAAAAGCTGAAAAAGGCGTGGTGTTCGGAAATAGATCTATGAGGGCAGTAATACCAAGGACTCTGACGGCCGCT # Right flank : CAATCAAATAAAAAAACTAAACCCCATTTGGCTACTTCATCACCAGATGGGGTTTTATATTGTGAAACGGAAGTATTTTATTAAATAAACACATTGAATAGTATCACGTCCTAGCTAACTTTTTTTTGAAAGAGTTTGGTGTACGATCCACTCTGAACAACCTAATGTTTCATGAGCTCTTTCTGACATACCGGACACTGGATCAAGAAGTAGGTTTTACAATATAAAGTGGAAATGGATAAATCATGTGGATGATATTGGAGAGGTGGGAAAGAAGTTTTAGAGATGGATCAATGGTTAAAGTTTTCATTTCATATTGGATACAATACCTCTTAATATAATATTCTCTATTTGACGGATAATTCCTAAATTTGTTTCCTTATGCTAAGTATATGGCAAGCATTCGGGTAAATAGGGAAGAAGAGTTTGCTCCTGTTAAAAATAAAATAGGGCCAGATAGCCCGGATACAGCCCAGAAGTTCATTTTCGATTTACATCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATAGAAAACACCTCATTAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 7 184354-184751 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ845664.1 Thermoflavimicrobium sp. FBKL4.011 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 184354 37 100.0 35 ..................................... ATAAGTGGATAATATCTTTTCATACTTCATTTTCT 184426 37 100.0 36 ..................................... TTATAGCGCGGGTGCTTGGTCAAGCTGGATCAAGCA 184499 37 100.0 34 ..................................... TGCATTGGACAAAAGTCCCAACACTTTCGAGAAA 184570 37 100.0 35 ..................................... AATTGTAGACCGTGCGAAACGATCCAGTTTAGTAA 184642 37 97.3 36 ....................................C TTGGCAGGGTCTAAGTTATAAGGTGGTTCCATTTGC 184715 37 83.8 0 .......A.......C....A.CA............C | ========== ====== ====== ====== ===================================== ==================================== ================== 6 37 96.9 35 ATAACAATGGAAAACACCTCTTATAGAGGATTGAAAT # Left flank : TTAAAACGACACGCTAATTAGCCCAGGGGTAGCTTTACCCTTGGGCTTAATATATTGTGCTACGCGGAGACTAGATGTTTCTCTTATTATAATTATAAAGATGAGGTAGCAGGGCATAACATTATATATAAATACTCTCATGGTTATATAATTAAATAAGTTTTGTTAACGGAAACTAGTAATTTTGAATCGCTGGGTGCTTCCTAATCAATTTATCACGATAAATAGCCGAACATTTAAAAAAGTGTTTTTGATCTAGCAGGAATTACTCGATGGATAGAGAATACTATATAAAAAGTAGAAGGGATTTGCGAGCACGATGAGCTTCGGGAAAATCCCAAGGGGTGTTCGGAAATGCGAAAGTCCTTGGGATATAAGGGTTAAAGTGAATTGTCAGATAGCTCTTAGCGATGAAAAATTGCATGAAAACAACTGAAAAGGTGAGGTGTTCGGAAAAGGGGGTACAATGCAAGTAGTACCAAGGCCTTCAGACATCCGCT # Right flank : CGCTTGTTGCAAATAAAAAAAGTAAACAATGGTTACTAAATCGAATAAAAAGCAATAAAACCGCCCTAATAAGGTGGATAAGCTTTGCTTTCTGAGGTTGAATGCCTAGCTTTTGACAGAATGTGCCTTTTCCTTAAACCCATAATCAAAAATACGATGATCATAGAATAGTGGTATTTATTGGATCGTAGAAATGGCGACAACCCGCTAACGACCAACATTCCTCCTTATAGGAAGGGATGTTGGTTTTTCATACTTATTAAGCAAATATTTAGAAATCCACCTCTTAAAGCGGTCCTATTAGCCCGAATAAAAATATTTAGAAAATGCTTGACTGCAAAATTAATAACCACTATTATAAATAGTAAGGAAATTATTTTCCTCTTGCCTTTATCTAAAATAAGAAATGGCGTTTCTTAATAAGAAAAATACGACTCTAAAAAAGCGCATATGAATGGTTATAGGGTTGTATTCTATCAAACAACTGATTAGTCAGATTA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAACAATGGAAAACACCTCTTATAGAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //