Array 1 96095-93870 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDOG01000004.1 Halomonas sp. LBP4 Scaffold4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 96094 29 100.0 32 ............................. GAACCGAACCATGAATACAGCAAACCGCAAAT 96033 29 100.0 32 ............................. GCCCTCGCTTGATGGCGGTGCACTTCAAGAAA 95972 29 100.0 32 ............................. GTGCGCCCGGCGCTGTGGGAAAACTGGAACTG 95911 29 100.0 32 ............................. GGGACGCGCATGGCCATGCCACCACCACCGCC 95850 29 100.0 32 ............................. CGACGGCACCATGCAGGCGGTCGACGCCGACA 95789 29 100.0 32 ............................. GCCTCGCGCAGGCGGTCATTCGAGGCGGCGAC 95728 29 100.0 32 ............................. CCTTCCGGGGCCAGGGGCTCGGCTACTGGTAC 95667 29 100.0 32 ............................. CAAATCGGGGTGCCTGTAGCGCAGTCGGTTAT 95606 29 96.6 32 ............................A ATATCTCCACTGCCCAACATGGCGATTATATA 95545 29 100.0 32 ............................. ATCGGCATCCGTGGGCTAGCCTCAAGAGAACC 95484 29 96.6 32 ............................T CTCCTGAGCAAATGCCCACGTAGGCGGTCAGC 95423 29 100.0 32 ............................. CGCTGAACCCCCACTGGCACGAGCCCTACATC 95362 29 100.0 32 ............................. GCGGCCTCCTCGCTGGTGGTGGCGGTGATCGC 95301 29 100.0 32 ............................. CAACTTGGGGTTTAGCGAGGTCGCCTGATCGG 95240 29 100.0 32 ............................. ACCAACGTCATCGGCGGGGTCGATGGCGCCAC 95179 29 100.0 32 ............................. CGCTCGGCCTGGTCCATGCCCTCGCCGTAGGC 95118 29 100.0 32 ............................. ATGATCAACCTGAACCCCAGGCTGGCCGAGAT 95057 29 100.0 32 ............................. GAGGCGCGGCTGTTCGACGTGTCCATCGTCAC 94996 29 100.0 32 ............................. GCGGGCGAGCACTGCCAAGTGTGCGGTCGGTA 94935 29 100.0 32 ............................. GCGCTCTCGCCGAACACGTAGACGTAGTCACT 94874 29 100.0 32 ............................. GCGTGCCGGCGCTGGCATGCAGATTGGGCGTC 94813 29 100.0 32 ............................. GCCACCATGCTGGAGTCGAGCGTCTTGGTGGC 94752 29 100.0 32 ............................. GCGGCAGCACCCGTCAGCGAAGTGCGCTCGAC 94691 29 100.0 32 ............................. TCGATCAAGTCGCTGAGCGGCGACATCGACCC 94630 29 100.0 32 ............................. CACGAGCGCACCGGCGAACCGCTGTACACCAC 94569 29 100.0 32 ............................. CAGGAGCGGTTCTATCGCTGGTATGACCACAC 94508 29 100.0 32 ............................. CACAACACGCGGATGGCGTCGTCGGCATGGGC 94447 29 100.0 32 ............................. CTGCTGGCGATGCGCCTGCGCTGCCCGGTGCT 94386 29 100.0 32 ............................. AAACCCAGGGCGCCGTCCAGCTACGAGCTGCT 94325 29 100.0 32 ............................. CGATAGCCGGTGAGGAGGCGCATCGGCGCATC 94264 29 100.0 32 ............................. CACTACGGAGGCGTGGTGGGCGCGGACCTGCG 94203 29 100.0 32 ............................. CTCTGGCGGCACACCGACTGGCACGCCGGGGC 94142 29 100.0 32 ............................. GCCGGGTGCGACGGCCAGCAAGGCATGTTGTC 94081 29 100.0 32 ............................. CACGTTTTCGCCCAGATGCTGCTCTGTGCCGA 94020 29 100.0 32 ............................. GATATGCCCATGCGCTACCTCATTGGCCTGGC 93959 29 100.0 32 ............................. CCCACAAGCTGGGCATGGCGCTGCTGCAAATC 93898 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 37 29 99.8 32 CCGATCCCCGCAGGCGCGGGGCTCAACCG # Left flank : CGGGGAGATCACGCCACCACCACCTGCACCGGAAGCCGTACCGCCGGCGATTCCCGAACCGCCATCCATCGGTGATGCCGGCCATAGGAGTGGATGATGGCCATGCTCGTGGTAGTGACCGAAGCGGTGCCGCCCCGCCTGAGAGGACGGCTTGCCGTCTGGCTGCTGGAAATTCGCGCCGGAGTGTATGTTGGGGATGTCAGCAAACGCATCAGGGAAATGATCTGGGAGCAGATCGATGCTCTTGCCGAGGATGGCAATGTCGCCATGGCCTGGGCCAGCAATGATGAATCCGGCTTCGAGTTCCAGACCTATGGCACCAACCGACGCGCTCCCTGGGACCATGATGGCCTACGCTTGGTGCGCTTTATTCCTCAAGAGATTAAGTAGTTGAAACGCAAGGCTCTTTAAAAAAACACGCTGTACAAAAAATAGGCAAAATCGTCGGTGGAATTTCCATCGGCGATTTTCCTTTTGTAGAACAATAATCTACGATTAGT # Right flank : GCGTCGCCCCACCAGGGCGTTATTTGGTGGGCCCGGTCCCTGAGGTACCCCCGCGAATTTCTCGATGATGGCGACATGTTCGCCGAATAAAGGCGCCTAGGCCCGCCCCTATGGGGTCAGACCCCAGCCGAGTTGCCAGGCTTGTCATTGTGCACGTGGCGAGCGGATTCGACACCGCCGGGGTCTGACCCCATAGGGCCTCCCAGCGCTGGCAGTTCACCGCCATAACACCCTCAACACGCTGATTTTTTTAGTAAGACTCCTGGGGATCCGTCAGGCCCAGTCCCCGCAGGCGCGGGGCTCAACCAGACGGCCAGCCGGTAATGCAGAGAGTCTAATCCTGGGGCTACCCACGAATATCTCGACGATGGCGGCATGTTCGCCGAAAAAGGCGCCGAGGATGTCCCTGCGGGGTCAGACCCCGGCCGAGTGATTGGCCCATCATCGTGCGCTTAGCGAGCGGATTCGACACCGCCGGGGTCTGACCCCGCAGGTCACCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCAGGCGCGGGGCTCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGATCCCCGCAGGCGCGGGGCTCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //