Array 1 997013-997970 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP041345.1 Tenuifilum thalassicum strain 38H-str chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                               	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	==============================================	==============================	==================
    997013	    46	 100.0	    30	..............................................	TTATTATACTCAATTATATATACTTGTTTA	
    997089	    46	 100.0	    30	..............................................	TTCACCCATACATATTTAAAGAAAACCAGA	
    997165	    46	 100.0	    30	..............................................	ATCTCTCCTGTAATGATGATACGAGACTTA	
    997241	    46	 100.0	    30	..............................................	GAGAGAAGATGTAGGTAGCATCAACGATTA	
    997317	    46	 100.0	    30	..............................................	AGACTCATTGCATCAATACGCGCCTGGTAG	
    997393	    46	 100.0	    30	..............................................	TTGCTTGCTATCTCTTCTAATGTGTTCTCG	
    997469	    46	 100.0	    30	..............................................	AGGTTAATCGCCTACCAGCAGATAACGCTA	
    997545	    46	 100.0	    30	..............................................	AGAGCAGCATTTAGTGTCTTTATGGGAAAT	
    997621	    46	 100.0	    30	..............................................	ATCTCGGCTCTGCGCTATCGGCAACTATTA	
    997697	    46	 100.0	    30	..............................................	AAAGATATTCTTACCTGTTTCCTCAGATAC	
    997773	    46	 100.0	    30	..............................................	AATTGCTGTGAGGTGCTTCCTATCCGATGA	
    997849	    46	 100.0	    30	..............................................	TCAGAGGTTGGAACTGGAATACTGAAAGTT	
    997925	    46	  97.8	     0	........................................T.....	|                             	
==========	======	======	======	==============================================	==============================	==================
        13	    46	  99.8	    30	GCTGTGACCAATATGTCAAAGATACAATCTGAAAGCAATTCACAAC	                              	       

# Left flank :   ATTCCAAAACATCTATGACCACTCTTAACCGCCTAAACCAATATCGAGTTATGTGGGTGTTAGTGTTTTTTGATTTGCCAACCGAAACCAAAAAGGAGCGTAAACAGTATGCGCTGTTCCGCAAGAATTTACTTAAAGATGGTTTCTCGATGTTCCAGTTTTCAATATACACTCGGTGTTGCCCAAGCCGCGAGAATGCCGACGTGCATATTAAACGCGTGAAAAGTTTTCTTCCCCCCAATGGCTATGTGGGAATATTGTGTATAACAGACAAGCAGTTTGGTTCCATGGAACTTTTCCTTTCCACCAAACCCATTAAAGCGAGCACAGAACCTCAGCAGCTGGAGCTGTTTTAAAACTGAAGCATTTAAGTCAGAAAAGTCATATGGCAGAAATAAAAAATCCACAGAAAAAGGTTCCTGTGGATATTCTATTGGTCACTTTTATTATTCGAAATACTGGTCTAACAAACTTAGGTACAGAAAGATAGATTTACCTAT
# Right flank :  CACCACCAAAATAAACTAAATCAAAAATAAAGCTGTAAATTCAAAGACTAATTTAAAAAAAAACGCAAGCAATTCACAACGCTCTTGGATAGCACATAACCAGGACTCTTGCGTCGCACCCCCCGCGGGTGCGTGGATTGCAAGGCTTTGGTTAATCCGTATACCTTGAGAAAATTATTTATTTCACGGAATGCGTTACGCAAAATGCGATATGCATATTGCGTAATGCCTTTTTTCTGCTTATATTGGCAAAAAGTAGTAAAATGGCTAAGGTAAAGGAGATAAACCCCTTTTTAGTAAATAGTTATATCTCAAAGGAGTACTTTTGCGATCGGAATAATGAGCTGAACATTTTGCTCAGGAATGTACAGAGCAACGTGAATACAACCTTGATATCGCCACGTAGGTTGGGAAAAACGGGGTTGATTTTTCGTTTTTTCGAATTGCTTCGCGAAGGGAGTGATTACGGAACTGTTTACGTGGATATTTATTCCTCACGT

# Questionable array : NO	 Score: 3.25
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTGTGACCAATATGTCAAAGATACAATCTGAAAGCAATTCACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.04%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-1.70,-1.60] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//