Array 1 98742-99226 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJOW01000004.1 Halosegnis rubeus strain F17-44 NODE_4_length_302948_cov_14.605549, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 98742 30 100.0 36 .............................. CGATATTCTCGAAGAGGGGCCGCCTGGGAGCGGTGA 98808 30 96.7 33 .......G...................... CCGTGCTCGCGTGCCCACTTGACGACCGGCCGG 98871 30 100.0 35 .............................. CGTAAGCCGATGACGGCCGCCGAGCGACGTGTCGC 98936 30 100.0 41 .............................. ACCCCCTCGCCGGTGAACATCCGAACGGCGTCGCGGTGCGG 99007 30 100.0 34 .............................. AGAAATGGATATTACACACCTAACCCGTGGCCCA 99071 30 100.0 33 .............................. GCTGCGTCGGTCAGCGTCATGTAGCTGTGAACT 99134 30 100.0 33 .............................. GCTGTCGTTGTGACAGTCGCGGCTCTCGCGGCT 99197 30 93.3 0 ......................G.....A. | ========== ====== ====== ====== ============================== ========================================= ================== 8 30 98.8 35 GTTACAGACGAACCCTTGTGGGATTGAAGC # Left flank : ATTCCTCGATGTCGCCGACGAGAAGACCGAGCGGGTCTGCACGGAGAAACTCGGGTACCTAGCGGAAAGTCCGTACCCGGGCCGTGGTCGTGGGGACAAAGAAAAGCTCCCCATCGATGGCCGGCGCGACCGGTACCGGCTGCACGTCTCTCGGACCTACACGGCTATCTACACCGTCTTGGAGGACGAGAACGAGGTGCGCGTGCTGGAGATTGTCTCCATCGATCAGGCGCACAAGCGGTACGGATTTTAGATAACAGGTAGTCGACTCTGTTGAAATCCTATTGATCAGACACTATCTGCGGTGAAATTGACCAGTACAATGTCGGGGAGACAACCACGGCCTATGTCGTGCAAGGCTCGCCCTCGAAATCATATCTTAAGATAAAGTAGCCCTCTACTACTTATATTCGGCATCTTAGGCCTATTCCTGATCGGAAGACCAGTCTTGTGGGATTGAAGCGGAACGGTTCGACCATTCTGGGTGATTCTCGCCGATT # Right flank : CAGGATCGACTTGGCAGACAACCAGATACGTACCGACAAAATCGCTCCCGCGCGTCCCACCGACGGCCGGGAGTAATCCACCAAATCGCCAAACAGCGTTCAGACACCCTCGATGCCACCCATTGACCGTAGCTGATTTTCACTCAGCGCCTCGTGGAACTGGCTAACGACGACACAAGCCTCCGTCGCTTCTGCCCCCCTCTCCCTCTCTCAGCCCCCGCTCGATCATGACATGGCTCCAAGACGGAGCAGTGCCTGCGAGAAACGAACCAGCCACAGCGGTGAGGAGGAAGCCAAGGTTGAGAACCCTGGCATAAATCAACAACACCCATGCCGTTTGGCTCTGGCTCAGTAAGGCACTGACACTCCCGTCGATTGCCACGGCATCGGCGTCGAAGTCGGTCGCAAGTCGGGCAAACAACGTCCAATCACTCGGCCCCACCCGGCTGAGACAGGCGATCATCAATGCCACCGCTGTGGCCAGCGTCGCCAAAGCGACG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGAACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 324001-323840 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJOW01000001.1 Halosegnis rubeus strain F17-44 NODE_1_length_837246_cov_15.366710, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 324000 30 100.0 35 .............................. TAACATGAGTGACTATGGCGCTGACTTTCTGACGG 323935 30 100.0 36 .............................. CTCGAAGGCGCGCCGATCGACGACGGCGAAGGGGCG 323869 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 GGTACAGACGAACCCTTGTGGGATTGAAGC # Left flank : CGAATCCCCCCTTCGTCGCCAGCAGTATCGCCTCGCGGGCTACGTCGCTGTCGGCGACGGCGCGGCTGACGACGCGCTCGGAGCGCTGGTGGCGGTAGTTGATGGCCGTGTCGATGACGTTGACACCCGTCGCCAGCGCCTCGCGGATGGCGGTGTAGTAGGCGTCGTCGCGCTCGTCAGTCGCGTCGCCGAGGTAGGTACCGACGCCGACCGACGAGACGAGCCCGTCACCGAACCGGCGGAAGTAGGTGCGGGCGAATGACTCGTGGAACTCGTTGCGGTATGCCCACGACGCGTCGCGGTTCATACCCCGCGTTCGAGACGACGGAGGCTAACGGTTCCGCTCTCGCAACCGTTCGGCCGTTCGAACTGAGGCTCGTTCGATGGTCGGTCGACGGCAGATTTCATCGACATCGGGGATTCTGGGGGTATTGAGGGTCGACGGAAACACTAAGTCCCGAACACCAGTACAGCGGCGTGAGTGCCACGAATTGGGCACG # Right flank : GGGCCACTCATGACAATTTTGTCGACGCTGCACTTGTTACAGAAAGGAGGGCCGATAGCGACTACGTCGATTCCTGCCGGTACGCCTCTACCGCTGTGGCGTACCCCTCCCGATACGTCGGATACGTCAGTTCGTACCCCACTTCGTGGAGCAGGTCGTTGCTGACGCGCTTACTCGTGAGAATCCGGCGTTGGGCCGGCTCCGAGAGGTCGCCCGCGTCGAGTCGCTCCTGTTTCGTCCGTTTCTCGGGGCGCGATACGTCACACGCGTCGGCGAGCCAGTCGGCGAACGCGTGTTTCGAGGCCGGTTCGTCGTCGACGACGTTGACGACCGACGGTTCGACGCCGGCGAGCAGATGCGCGACCGCACCGGCTGCGTCGTCGCGGTGAACCATATTCAGATAGCCGGCTGTCACCGGCCCCTCCAGATAGCGGTCGAGGCGGTAGCGGTCCGGGCCGTACAGTCCGGCGAATCTGGCTACGGTTCCGTCGATACCGCGC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTACAGACGAACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //