Array 1 21210-19717 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTC010000018.1 Lactobacillus delbrueckii subsp. lactis strain FAM 24848 FAM24848-i1-1_scf18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 21209 28 100.0 33 ............................ CGGTCGGCCGATCCTTGCTCGTAAGTATGTATA 21148 28 100.0 33 ............................ ATTTCGGCGCCAACAAATTGGCCTTTTGAGGTT 21087 28 100.0 33 ............................ TGACGTTAGTTTTATAAACACCACTACAGGTCA 21026 28 100.0 33 ............................ TTTTTTTAGGAGGGACAAAAATGGACGTAAAAG 20965 28 100.0 34 ............................ TTTATCGTTGGTGATAGCACGGCGGCGGCCTTGG 20903 28 100.0 33 ............................ TTCGTTTCCAGATAAAGAGATCAAACGGTCAAA 20842 28 100.0 33 ............................ TTCGTTTAACGTACCGTTTAAATTCCTTTCGAA 20781 28 96.4 33 A........................... TAGTAACTTAATCAATTTCGTTATCTAACCTCG 20720 28 100.0 33 ............................ TTTTGTCCCCCGTTTTTTCTGACGAAAAAATGG 20659 28 100.0 33 ............................ TCTTCCAATCTTGGTTTGCCGTCATGACAACGG 20598 28 100.0 33 ............................ TAGTACTACCTTTGGGATCAAAATGCAAGCCCT 20537 28 100.0 33 ............................ TATAACGCTTAAAATATTCTTGATGCTTCTCCC 20476 28 100.0 33 ............................ CACCTTGAACAGTTTTAGGCGCTAAATCGTTAT 20415 28 100.0 33 ............................ TGCTAATAAATGGACTTTAGTGGTAGCGATGTT 20354 28 100.0 33 ............................ TAACACCCCCTCAAACATAAACCCCGCAAATTC 20293 28 100.0 33 ............................ TTCAAAAAAAGTTCTTCAAACATAACCGCTCTA 20232 28 100.0 33 ............................ CAAAGTAAGAAAAAACCTTGCAAATGCAAGGCT 20171 28 100.0 33 ............................ TTTTTCCTTGTTGTCGGTCAAAACTAAATTGTA 20110 28 100.0 33 ............................ CAGCCTTGTTTGCAAGTACCAAAAAATGCATAA 20049 28 100.0 33 ............................ CCGACCTTAGCGGCTTTTCAACCGTTGACGCGG 19988 28 100.0 33 ............................ TGGACTTCTGATGACGAGGAGATTCGGGACGCT 19927 28 100.0 33 ............................ TCCGCAAGCGTACTCATAAGATTGTCCAGATTG 19866 28 100.0 33 ............................ CGCGGCTGATATCCTTGACGGGGCGGCCCTTGT 19805 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 19744 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 25 28 99.3 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGCTCATAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //