Array 1 3323464-3317656 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024469.1 Geobacter sp. SVR chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 3323463 37 100.0 32 ..................................... CAGCTTCCCCCCGACCAGACGCTGGAGATCAT 3323394 37 100.0 34 ..................................... TGCCAAGCCACATTCAAGCGCGTGGTCAGATCGC 3323323 37 100.0 35 ..................................... CCCACTCCAGGGTGATCTGCTTCACTTCGTCCAGC 3323251 37 100.0 35 ..................................... GACCAGGATCCCGCAGCACTGCCGACACGACTTGC 3323179 37 100.0 36 ..................................... ATATTCCAGGTAATCCTCCGGTGAGAAGTTGGTGGG 3323106 37 100.0 36 ..................................... AGTTCAGGGAACTGAGCTTCCATACTCACGGAACCG 3323033 37 100.0 34 ..................................... ATCCTGCCTGCCCGCATTGCGGATGGAAACCGGA 3322962 37 100.0 36 ..................................... AAATATCTCTGGTATTGGGCGACTCGGGGGTATGAC 3322889 37 100.0 35 ..................................... ATGTCCACCTGGGGTAGCACAGGATACGGCGCAAT 3322817 37 100.0 36 ..................................... ATCGATAATCGTGAACAGCTTACCCCGGAGCCAAGC 3322744 37 100.0 34 ..................................... AACGGTGCCGAAGGGCATGGGGACAACTACCCCC 3322673 37 100.0 35 ..................................... ACGATCAACGCCGTTGATAGCTCCTGCCCCCCGCC 3322601 37 100.0 39 ..................................... CGCAACAACGTTGGGGCCTGTGAGGATAAGGACGGGCGG 3322525 37 100.0 35 ..................................... GAGAAATGATTGAACACTGCATAGCTCCGCAAAGT 3322453 37 100.0 34 ..................................... GCTTAGTATAACCGAAAAGAACAGTGTACTCGTT 3322382 37 100.0 35 ..................................... TTCTTCTCTGCGTCCATCTGCCACTTCTCAGGGAT 3322310 37 100.0 36 ..................................... TTTTTGTAGGCGTTCGCATTCATCTTTCAGTGTGGC 3322237 37 100.0 34 ..................................... TTTATCCCTTCATCAAGGGCCTGCATCACCTCTG 3322166 37 100.0 35 ..................................... AGGTTTCCGGTGTGTTCTGTCTCAATACGATCCCC 3322094 37 100.0 35 ..................................... AAATTATCGCGGTTCATGGGCTATTCCCCTTTTGC 3322022 37 100.0 35 ..................................... AATGAGCATATGCTGATTTTTACACGCGGTCAGGC 3321950 37 100.0 35 ..................................... CAAATCAACACAAAGCATTGGGGATTTGTGCCACG 3321878 37 100.0 34 ..................................... AAGCACAATCATGGTCAAGGTCATACCGTCAAAG 3321807 37 100.0 36 ..................................... ATCGGTGTACCTGATGGGCATTCTGCTGTACTCGGC 3321734 37 100.0 35 ..................................... ATCGGTGTACCTGATGGGCATTCTGCTGTACTCGG 3321662 37 100.0 36 ..................................... TTGACGAACTGGTGGCGGATCACAAGGGCGACATCG 3321589 37 100.0 35 ..................................... AACACCGGGGCTACCCGTTCACCTTTGGGAGATAA 3321517 37 100.0 35 ..................................... TTCATTGCTTACTGGTCTTCTCTCTTCCTCCCCTC 3321445 37 100.0 37 ..................................... TCTCCGGTGCGTCCGGTTAAGCAGCATGGTTGCCGGA 3321371 37 100.0 34 ..................................... ACTATAACCGTTGACAACAAGAAATACGGCCCGT 3321300 37 100.0 35 ..................................... GTCTACTATTAAGTACAGTTTGTGAGTAGGATATA 3321228 37 100.0 38 ..................................... CAGCCATCACTACCACAGACAAAAGCCCGTAGAGGACT 3321153 37 100.0 37 ..................................... TCTGGTATCTGCAATTTTGACACCTTGTGACGGTAAA 3321079 37 100.0 36 ..................................... CAATGTAATGTCAGTAGTGCATTCAGTCTGTAGTGC 3321006 37 100.0 35 ..................................... TCAGAGGTCGCCAGGGAAAACGAGCAGACCGCCGG 3320934 37 100.0 36 ..................................... CTTTCGATTCCGTTCTGTTCCTGCCGCACCGCCCGC 3320861 37 100.0 35 ..................................... TTGAGAATGTCGGTGACTTTGACGGCCATGGCCTC 3320789 37 100.0 35 ..................................... GTTTACCTGCTGACGCCATCAGTCAATGACGACGG 3320717 37 100.0 36 ..................................... ATTTATGGCCGCATCGGCATCAACAGCCCATCGCCC 3320644 37 100.0 36 ..................................... CTGATCAAGAAGCCGGATATCAAGGCCCTGGTTAAA 3320571 37 100.0 37 ..................................... TGCACTACCGAATCCGCCTCGAAATCCTGTATGTATT 3320497 37 100.0 36 ..................................... GAGAGATCAAAGAGGCGTCAGGGATTAAGGTAGAAC 3320424 37 100.0 36 ..................................... AGTACGAATCTATGAAGGCTTTCAGAGCTTCCAGGC 3320351 37 94.6 33 ......T................A............. CTTGAAGGGCATATCCTCCAAGAGGCTGTTGGT 3320281 37 94.6 35 ......T................A............. ATGAGGTCCTCATCTTCAATCATGAGGCGGAACCA 3320209 37 94.6 34 ......T................A............. TGGACTCTTCGTACGATCCAGCAGTAGGTTGGTG 3320138 37 94.6 35 ......T................A............. AACTACTCGGTCGAAGTGATCCAACGAGGCAGCAG 3320066 37 94.6 36 ......T................A............. TCTGCTCGGCGGAGAATTACCGCGCATGCCGTGCTG 3319993 37 94.6 33 ......T................A............. TCCTTGGCCGTCTGCCAGTCAGCCTGCAACTGC 3319923 37 94.6 35 ......T................A............. TAAAGAGTCAGGAATTATGATTTCAAAGGACAGCA 3319851 37 94.6 35 ......T................A............. ACCAGATCTTTGTGAGTCAAAACCTTGTCGAACAT 3319779 37 94.6 35 ......T................A............. ACGGCCATTAACGGCGCAAGAACGCATGGAAGCTT 3319707 37 94.6 36 ......T................A............. GCCCTGGGCAATGGCGTGACCGGACCCACCGTCAAC 3319634 37 94.6 34 ......T................A............. ATGGACGCAACCGGAAAGAATCTACCGGAAGGTT 3319563 37 94.6 33 ......T................A............. CTTGACCATAACCAGGAGCATTGGGAAAAAGCT 3319493 37 94.6 36 ......T................A............. ACCATCATAGGTTTCATCCGGTTCGGCGTTCGGGTC 3319420 37 94.6 34 ......T................A............. GAGGTGTCGCCATGGAATACTTTATACATCAGCC 3319349 37 94.6 35 ......T................A............. TGCTGTGAAGCTGGCAAGGCGATAAAGCAGATACC 3319277 37 94.6 35 ......T................A............. AGCCTGTGGGCCAACTCGAAGGATTGCGACCTGGA 3319205 37 94.6 37 ......T................A............. TATAAGCACGCGGGTGCTGATGGTTTGACTCGAAACT 3319131 37 94.6 35 ......T................A............. TTGACCGGGTACAAGGCCGCCTCGGACTGGACGAA 3319059 37 94.6 32 ......T................A............. GATTTCGTCCAGGTACGGGGACACCGACTGTG 3318990 37 94.6 34 ......T................A............. ATCCATCCTGCTGTCCATCGTGGCCTTGCGCTCC 3318919 37 91.9 37 ......T.......T........A............. GAGATGATGGGCCAGAATGCCGCAGAGCATCCCGATC 3318845 37 91.9 35 ......T.......T........A............. CAACCTGACCGACGACACGGGGGATATCGTCACCG 3318773 37 91.9 36 ......T...........A....A............. AGCAATGGCGTGGCGGTGCAGGGTTACCAGTCGGCT 3318700 37 89.2 35 ......T...........A....A..C.......... AAATCAGCCGCCGAGACTGCCGCACAGAATGCCGC 3318628 37 91.9 35 ......T...........A....A............. ACGACCGTGGCGGTCGAGGAATACGTGCCCATGAT 3318556 37 91.9 34 ......T...........A....A............. GGTGACACGTCCCAATTGTTACCTATTTCGTTAG 3318485 37 89.2 33 .....CT...........A....A............. ATGAACGCCCCGAGCAGCGACATCACCATTTCC 3318415 37 91.9 34 ...T..T................A............. CTGAATGGCATCACATCGAGCCTGTCGCTGGTTC 3318344 37 91.9 35 ......T...........A....A............. AGGCAGATCCCGCGGACGCTCCCCCGGCTGCAGCG 3318272 37 89.2 34 ......TT......T........A............. GAGAAACTATTGGCCGCCCTGAAAGTAAAGCGGC 3318201 37 91.9 36 ..................A....AT............ GGTGTAGTCCTGGATGTGGATCGTGTAGCCCATCGA 3318128 37 83.8 34 A.....T.......T....GT..A............. TTGTTCAGGTCGGACTCGAACATCACTGCGTATT 3318057 37 91.9 40 ......T.......T........A............. CAGAGAGGAAGCGGCGGGAAGAGGCAGATATCGTCAATTT 3317980 37 94.6 34 ......T................A............. CTTCAGATTGCGCCAGCCCTGCATCCAGGCATCG 3317909 37 91.9 35 ......T...........A....A............. CTGGTCATGGGCAAAACCTGGAGCGACCCCACCGG 3317837 37 89.2 35 ......T.......T........A.........G... ACCGTAAAGCGCCCGTCCCGCAGGCGTTCTGCAGC 3317765 37 97.3 37 ................A.................... GTCTGGTCATAGCCCCATGAAAATTGTAAAGAATGTC 3317691 36 83.8 0 ......T....-..............GC...A..G.. | ========== ====== ====== ====== ===================================== ======================================== ================== 81 37 96.6 35 GATCCGCCAGTTCTCCGGGACTGGCGTGGATTGAAAC # Left flank : AACTCTATCAACTCCAATAACTCAGGACACTAACCATGTGGGTAGTTGTCTGCTATGACGTCAATACTGAAACACGGGAGGGGCGCAAACGGCTCCGGCGGGTGGCGCAAGTCTGTAAAAACTTCGGCCAGCGCGTGCAGAAATCAGTTTTCGAGTGCCAAGTGGATGAGATGAAGTACGAACAATTGCGTAAAAAATTGCTCAAAGAGGTCAAGCTGGAACTGGACAATCTGCGGCTATATCGCCTGACCGAACCGAGAGAGCAGAGGGTCGAGGAATATGGTGCTACCAGGACGTTGTTTTTCGATGAAGAAACGTTGGTGGTATGAGCCGCGCGAACCTAGTGCTCATTCAAAAACGCGGAACTTTCGCGATGATTGGAATCATTAGGGAAAATAGGAGGTGGGGGGATGGCATGCGGCGTGCTCAAACAACGAAAGTGACGGTTCGTGAAATTCCATATGTAACATGTTGTAATCTGTCCCTAATTTGAGGGGGCA # Right flank : CGTGCGGACATTGATAAGTTTCGAGTACCACCCGGCGATCCGCTACCCCAGCACCTTCCTCGCAACCGCCAGCAACTGTTCCGGCTTGAACGGCTTGACGATCCATCCCGTTGCTCCGGCGGCCTTGCGCGACTCCTGGGATTCCGTGGTCAGCATGATGATCGGGATGAAGCGGTTGTGAGCGCCTGACCGGACGCCCTTGATGAGTCCGATGCCGTCCAGATGGGGCATGTTCAAGTCGGTGATCAGCATGTCGACCTTCTGCTTGCCCAGCTTGGTCAGTGCATCCCTGCCGTCTGTTGCCTCGATAACTTCATATCCGCTCTGCCTCAGCGTAAAGACCACCATCTGCCGCACACTGGCCGAATCGTCCGCTGTCATGATCACTTTTGACATCCTGCGCTCCCCGATAATTCTTCCTGCATACGCAATCATCCTCCCGACCTTCGCCAGGCAGCATCTTCCCGACCTGCTGCAGCAGCTCATCCGTTGTAAACGGC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:0, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.78, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCCGCCAGTTCTCCGGGACTGGCGTGGATTGAAAC # Alternate repeat : GATCCGTCAGTTCTCCGGGACTGACGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.90,-14.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [49-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //