Array 1 5745-5229 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFRW01000295.1 Glycomyces dulcitolivorans strain SJ-25 C1581, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5744 29 100.0 32 ............................. ACGGTTTCGGTCGGGCATGTCGCGGTGTACAG 5683 29 100.0 31 ............................. GTGCTGACATGAGAGAGCCGGTGAACCATGC 5623 29 100.0 32 ............................. TGGCTGCGACCACGCTGTCGCGGATCGGGTAT 5562 29 100.0 32 ............................. GTCCCCGCCGAGCTGGGTGTCAACCACTTCGC 5501 29 100.0 32 ............................. TTTTCCGACTTGGAGAGGCCGGGAAGTTCGCC 5440 29 100.0 32 ............................. GAGGTCATGGAGCAGTTCGGCGTCGCGAACAG 5379 29 100.0 32 ............................. CGTGACTGGGAGAAGGCCGCCTCCCTGCGCCT 5318 29 100.0 32 ............................. TGGTGCGCGAAATGCGGTGAGCGCAAAGCCAC 5257 29 93.1 0 ..........T.G................ | ========== ====== ====== ====== ============================= ================================ ================== 9 29 99.2 32 CTGATCTCCACGCACGTGGAGGTGTCCCG # Left flank : GCGCCCTGCGCCTCCTCCCACAGATCATCACCGACCTCCAATGGCTCCTCGACCCCGAACACAACCCCCGAACCGAGATCGCCAACCCCGAACTCGTCCACCTCTGGGACCCCGACCTCGGCGACGTCGCCGCCGGCATCAACCACGCCGACACCGAACCCGACTGGTGAACCATGGCCAACCTCGTCATCATCGCCACCACCGCCGTCCCCGACCATGTCCGCGGCGCCCTCACCCGCTGGATGATCGAACCCAACCCCGGCCTCTACGTCGGCACCCTCTCCGCCCGCGTCCGCGACGAACTCTGGCACGCCGTCAGCAACTCCGTCGGCGACGGTGCCGCCACCTGCATCTACCCCCACGCCGACCGCGAACAGCGCTTCGCAATCCGCACCGCGGGCCAACGCCGCCGCTCCGTCATCGACCTCGACGGCCTCCAACTCATCCAATTCCACGCCGAAAACGAACAAGACCCCGAGTAAACTCCCAGTTCAAGAAGT # Right flank : ACGATCCGCCACAACCACTCGACCGCTGAGGCCTACTATCTGTTGAAGTAAGAACTCCTGAGAATTGCACGCTCTGATGCGGGAATGAGCATGCTGGAGCAGCTAGTGAGGCGGGTCTTCCCTGCCAGCAGACTCAAATCCAGATCCCAGCTGTATCGTCGCCGCCAGTGAAAGCGTTCGTCAGCGTTGTCGAGCGCAAGGCGGATCTCAGTGTCGCCCCAGGAGTTCACCGCTCTCAGGTGCTTCACGACCATCGACAGTTCACCTCGAACGAAAGCTCGGCCGGTGTGCTGGACGCGGTGGCAGTCTGGGCATAGGGCGATGAGCCGGGCGAGTCGCTGTACGGCTGAGGTCGTGGTGACTTCGAAGTGCCAGAGTTCGTGGCAGTCAGGGCGTCTGGGTATGCCGGAGTCGGGGTCGTAGCCGGGTTGGCCGCAGACTTGGCAGCGGTTTCGGGCCTGCTCGCATACGGGGATGCGCAGCTGGTCCCATTGGGTTCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGATCTCCACGCACGTGGAGGTGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 14866-15685 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFRW01000295.1 Glycomyces dulcitolivorans strain SJ-25 C1581, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14866 29 100.0 32 ............................. AAACACGGTGACGTGACGACCTGCTTCGCGCC 14927 29 100.0 31 ............................. ACGACCCCGATCACTCGGTGCCGGCCTTCCT 14987 29 100.0 32 ............................. TCTGGGAATGGTACGAGTACCCGCGCCCCACG 15048 29 100.0 33 ............................. GCCATCCACATGCTCAAGGTCATCGGCGCCGCT 15110 29 100.0 32 ............................. ACGGCATCAGCCTCACCGGCGACCCCGTCGAG 15171 29 100.0 32 ............................. CAGTGGCGCACCCTCGCGTGGGCGAAAGCCCG 15232 29 100.0 32 ............................. TCGGAGCGAACCTCCCGCCGGTTCCCGACGTG 15293 29 93.1 32 ..........T.........A........ GCGGGTACGACCGGCAGGTCATCTACTCCGGG 15354 29 96.6 31 ...........A................. TTCGACAGGTGCCGCCACGGGCCCCGGATCC 15414 29 100.0 32 ............................. GACGACCCCGTGGCCGCGGCCGACGCCAAGGC 15475 29 96.6 32 .......................A..... ATCCGTGAGGCCGACGCCGCGATCGAGCTGGA 15536 29 100.0 32 ............................. GCGCACTTCAACCTGACATCGCGGCACTGGCC 15597 29 93.1 31 ................CA........... TACCGGTCCTCGTTCGGAACGGTCGGCACCC 15657 29 75.9 0 .C.C.......AA.T..T.G......... | ========== ====== ====== ====== ============================= ================================= ================== 14 29 96.8 32 CTGATCTCCACGCACGTGGAGGTGTTCCG # Left flank : ATCCCGGACATGCCTTGCCGATATCGTGGAGGCCTGCCAGCAACACCACGAACGACCGGGCCTCCGTCAGCTCCAGGCCGAGACTGCCGGCGATCCACGCTCGCAGGTGGTCGGACAAGTACTCGTCCCATACCCGACCCGCGAACGCCGCCGCATCCAGCAGATGGCACACCAGCGGATAGAACTGCAACGCCTCACCCTCGCTGACAAGGCCGCGCGATTTTCCCCAGACTGCCAGATCAACTACATTCAGGTCCACAACCAACCTCCGACAGCAGAGCACGAACACCCACGTTGAGCATCACGCACCACTCCGACACGTAACCCCGCCACCACCATCGAACACCCCCAAGGAATCCCGAATGCCGCACCAGCAGTCCGAGCCGGAAGCCAAATCGGCCAACCCCGTGCACGCGATAGCGAGGGCGCCGGTGCGCCAACCAAACCGGCTCCATTGCAAGAACGAACAAACGACCCGATAAAATCCCAGCTCAGGAAGC # Right flank : GCCCAACTACGTCTTCGATCATTCGTAGATTTTTTCGTCATCGATGTTGGAACTTGTTTCGGTTCTAGGATTTCTTCATAGGAACTCATATCTTTTATTGATATGCCCGTTGTTCTCGATGTGACAGATCGAGTTCGTTGAAGTATTTCATTAGATAACTTGGTTTCACTCGTTCGTCTCGCTCATTTCTTTCGAAGCATTCTATTCAGCACACGAAACCCGTGTGGCTGACGATTTTGACATTGGCGCAGGGTCTAACCACCGAAGAATCACCCTTAGTAGTTGATCGACTTCATTTATGGTTCCATGCTCTAATTCCACGGCATGACCATTCAGGAAGGTGAGCCCGGCCCGCCGAGCAGAGCAGCGCCTTGGTAAAGTACGCCTCGCAAGATATCGTCCTCCGCCTCGGCGGAGTCGCCGAGGCGGCCTTCGAAACGGAGGGCAATGGCCAAGGAAGCAAACAAAAATAAACAGAAACGCCCGCCCGTGAGGTTCCA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGATCTCCACGCACGTGGAGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCTCCACGCACGTGGAGGTGGTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //