Array 1 3481336-3479480 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025092.1 Klebsiella pneumoniae strain KP11 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3481335 29 100.0 32 ............................. TTCTTCCAGAGTTGATTTGGCATCACACAAAC 3481274 29 100.0 32 ............................. GACCGTGCCAGTGGTACCGCCCAGAAGTAGCA 3481213 29 100.0 32 ............................. GTGACGAATTTCGTTAACCTGCCGGCCAGCGT 3481152 29 100.0 32 ............................. AAAGATTTAAGTAGCGCCGGTAAAACCGGATT 3481091 29 100.0 32 ............................. CTCATCACCACGATATTGCGCCCGGTCACGAA 3481030 29 100.0 32 ............................. TCGCAGCCGACCAGTACCCATTCCGGATCATC 3480969 29 100.0 32 ............................. GAGCGTCCGGATGTGCGTTACCGCCGTATCAA 3480908 29 100.0 32 ............................. TGAGAACGGCGAGTGGGAAACGTTCATGCTGC 3480847 29 100.0 32 ............................. CATGCCGCGGGGTGGCTGCTGAATACGTTCGA 3480786 29 100.0 32 ............................. GTCAGGGGATTACCATCCCTGACTTTGTACTC 3480725 29 100.0 32 ............................. TGGATTGACGATCGGGCGCAGGAAATTATCGA 3480664 29 100.0 32 ............................. CCTTCAGCGCCACATTCTCCGCCGCCAGCTGC 3480603 29 100.0 32 ............................. GCGTGCAAAATCAACGTCGCGGCTGTGGTTTC 3480542 29 100.0 32 ............................. GTCTGGATATTTGGGGGCGTATCGTTAATGTT 3480481 29 100.0 32 ............................. TCTTAACGATATTGCGGAGGGAACCGGAATTG 3480420 29 100.0 32 ............................. TTGAGCCCGCTATCTTCACCGATTGCGGCGTC 3480359 29 100.0 32 ............................. CAGGCGGAACCGGTGATAGATTTCGCGGGTTA 3480298 29 100.0 32 ............................. TCGGGGCGGCTCCGGCGATACGTACATCACCA 3480237 29 100.0 32 ............................. GCATACGCGCCCGGCTTTTTGGCTTCGAGATC 3480176 29 100.0 32 ............................. ATATTGGTGGGGATGAGATTCGCGAACTGGCC 3480115 29 100.0 32 ............................. AAAAGTTAGACGTCGCATCAATGAGCGCTGCC 3480054 29 100.0 32 ............................. GGCTGGCTCGTTCTCGACCGTCGCGCAGTTAA 3479993 29 100.0 32 ............................. CCGTCTTCGTTGAGCCAGGTTTCCGATGCGAT 3479932 29 100.0 32 ............................. GGTGAATGGTTTAAAAAGAATAGCCAGGGCAA 3479871 29 100.0 32 ............................. TGGTAGCCAGAGAGCAGCCTGAACACCTGCGC 3479810 29 100.0 32 ............................. TCCTGCAGATCGGAGACGGCGACAACATCGAG 3479749 29 100.0 32 ............................. TCCTGCAGATCGGAGACGGCGACAACATCGAG 3479688 29 100.0 32 ............................. AGTACCGAGATGGCGATACACATCTTTTCTAT 3479627 29 100.0 32 ............................. CTACCGCACAGCGGAATCATTCGGCTTGGTTC 3479566 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 3479508 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATCACCGCCATTAAAAGCTGATCGAGAGTACCGACACCAACTTCAGCGAGTAGCGCTTTTTTGCGGGAATCAGCGAACCAGATGTGGCATTCACTGGCGGCGTTGCGATCGTCTTGCGCGTAATCTTCTGCCGTCTCATTGACTGGCTGCCAGATGGATTGCCGGAAAGTTTCTGACATTTCTCTTTCGCCATGAGCCAGTATAAGCGACGGCCTGGCATCATCGGCGAACAGGGCACGGTAAGCCGCCGACAAGCGTTTATACATAGCATTCGCGGTTGCCATGGTCGGCAGTCCAACGTAAAGTCCATGGCCTTTACCTGCAGACATTAAACGATGAGTCAGAATCAGTGCTGCTTCTGTTTTACCAGCTCCGGTTACGTCTTCCAGAATAATGAGTTGCGGGCCTGGCGATGAGATATCCAGAGTATTAGCTCGCTGCTGGAGCGGAGTGAGCGTATGGATAAAGGGAAACAGAGCTTGATGATTATGATAAAAGC # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCTTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //