Array 1 105671-107282 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZBU01000004.1 Lachnospira eligens strain 2789STDY5834875, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 105671 30 100.0 35 .............................. ATACTAGCAAAGGCAGAGTTTAACGGCTCTGCTGA 105736 30 100.0 36 .............................. GTGCTTATAGTGTTTGTAATGCCGATTATGCTTTTG 105802 30 100.0 37 .............................. ACAGTTCAAAAGGTAGGATAAGGGGGAACATGAAACG 105869 30 100.0 38 .............................. GGGATATTACATGGTAGTAGGTTCGGAAGTCTGCGGAA 105937 30 100.0 37 .............................. TTAATGGATAAAAGCTCATAAGCATTCGATAAGCCAA 106004 30 100.0 37 .............................. AGAAGTACGGACTGACCGTGTATCTTTGCCCTAAGGA 106071 30 100.0 35 .............................. AAAGAACGGCTTGAACGTGAGCAGAATTTTAGAGA 106136 30 100.0 36 .............................. GTAATAGAGCCATTAACAGTATTATTGCCGCTATTA 106202 30 100.0 36 .............................. TTTGAAGAATAACACTATGTTTCATGTGAAGCATTA 106268 30 100.0 36 .............................. TACAACAAAAGATAATATAATTTCAATAAACACACT 106334 30 100.0 34 .............................. ACGGAAACTTGAATGCCTTGCCGTTGCAGTGTCA 106398 30 100.0 36 .............................. GTGCTGGATAATTCAGCGGAAGTAATTGAATAAAAA 106464 30 100.0 36 .............................. TCTAAAACTTTCCTGCAATATTTCAATCTGTTTCCC 106530 30 100.0 35 .............................. TATACACCTATATATTCAGTGCTGTGATAGGGTTG 106595 30 100.0 37 .............................. CTTTGAACGATAATTATAAGAATTGCTGTCTTACTCG 106662 30 100.0 35 .............................. TAGCCAACTCGAAAATGCTTGCATTTCTGCGGGAG 106727 30 100.0 36 .............................. ATCTTTGAAGTAAATAACTCGTCCTGGCTCTGCTCC 106793 30 100.0 36 .............................. GCCATGGGAGGACGTACCTTTGTAAGTGTAAAAATA 106859 30 100.0 36 .............................. ATTCTTAAAATCAAAACAGTTTTCAAGAACATATTT 106925 30 100.0 36 .............................. TTCTTTAATGCTCTTAATATTTTCTGCTCCTGTTCG 106991 30 100.0 36 .............................. TTGTGAATGATGCGGATGTGATAACCTGTGAATCAT 107057 30 96.7 35 ................G............. TTACTTGGTATTCACTGGGATTGGCTCGAAACTCT 107122 30 96.7 35 A............................. GTTCAAACAAGGGTGCTAATAACAAGGTCGCTTGT 107187 30 96.7 36 A............................. TGACTTGAAACCTGCTACAAGTGAAGCCTGCGGATT 107253 30 96.7 0 .....................A........ | ========== ====== ====== ====== ============================== ====================================== ================== 25 30 99.5 36 GAATTAATAGATACATAGTGGGATGTAAAT # Left flank : AAAGCATTTAATAGGTGAGAAAGAATATGAAGGGTTTAGAATATGGTGGTAGTATATGTATATTGTACTTGTATATGATGTTAGTAAAGATGAAAATGGGCAAAAAAGATGGTCACATATTTTCAAAATCTGCAAAAAGTATCTGACGCATATTCAGAATTCTGTCTTTGAAGGAGAAATATCAACAGTTCAATTAGAAAAATTACGGGGTGAGTTGAAACCACATGTTAATACTAATCTGGATTCAGTCATTTTATTCAAAAGCAGGAGTGAAAAATGGCTGGATAAAGAATTTTGGGGTAAGGAAGATGATTTGACGAGTTTCATAATTTGATTGTCGACCAGAAATAGTGTAAAATATGCACAGAGTCGACAATGGCGATATTGCTATGCTTCTAGCATATTCAGGGCATAAAGTATTAGTAATCTGTTGGCGGATTTAAAGGGTAGACAGAATAACGCTTCAGAGTTGAGAAACAGAGAGGCTTTAATAATTACGG # Right flank : TCTGCGAATAGGTGTAATTTCAAGAGAAATGTTTTTCATCGTTATGCTGTTGCACTGGTGCAACTTTGAATTATTCTACTATGCACAAATCTTCTGCAAGCATATCTGCCTAAGATTTTGCTCTTGCATAATTCTTCATTTCTAAATCCTCACTTTCTTAAAATTGGGTATAAAAATACCACTTGACCGGTGGTATTTTACTAATCAATATGCTTTATTTCCTTAATGGATTGATTTTCTTTAAGTACTCCTGCTTCTTTGAGTATCTTTTCAAAATCTTTATCATATCTCTCTTTGTCTTCCTTTGTTCTTTTAACAATTTCTCCTGTTGTTTCAAATAATGGTATCCCCTTTTTTAACTCTTCACTCATTATATTCCTCCAACAAGATATAATATTTATCATCAACCTTTCTTTATTAAGTACTTTGAATCTCTGATTTGTCTTATATAAAACTTCCTGCTCCTGTGCATTAACAGAAGAAATATCTCTACCATTATG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGATACATAGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 108813-109496 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZBU01000004.1 Lachnospira eligens strain 2789STDY5834875, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 108813 30 100.0 35 .............................. TTCTGCATCTACCTTTTTAGCAACCAGTTCCTTAG 108878 30 100.0 34 .............................. GAAGAAACAGCAGCCAAGACAGCAGCGGCAACAA 108942 30 100.0 36 .............................. AGACACGCTAAAGAAGATAAAGAACGAAGACACAAA 109008 30 100.0 35 .............................. AGCGATGATAGATACCCTAGTGATAGCACATGGGA 109073 30 100.0 36 .............................. ACTGTAAATATAATAAACATCAATAAATCTTCACTC 109139 30 100.0 35 .............................. TATAAGAGCCGTTACACTGATTAATAAAGTTATCA 109204 30 100.0 36 .............................. GAAATACAAGGTATTTCATAGTCAATTCTGTCTCCC 109270 30 100.0 35 .............................. AAGAGAAGTGATACGGTAACTGATACATCAGTTAT 109335 30 100.0 36 .............................. TTCTAATCGCCTCATAAAAGTTAGTAAGAGCAACTG 109401 30 100.0 36 .............................. GAACTGCGGATATAAGATGTTCTTCCAGCAAGCAGG 109467 30 90.0 0 .....................A..A....A | ========== ====== ====== ====== ============================== ==================================== ================== 11 30 99.1 36 GAATTAATAGTTACATAGTGGGATGTAAAT # Left flank : AGAAAATATAGTAGTAAATAGACAGAACAATGATATATTTAAAAGATAAAATTAAAAGAATATGACTTACAAATTAGACAATCTGAGGAATTGAAAATATTTTTGAGATGAAAAAGATTTATTTAATATGGAATCTGATAGCAAAGTTTTGAATGCCTTAAACAATATAAAAACATTTTAGACGTACTTATGAAATTATTCTCAAGGGTAAAAATATCGCTGTTTTTACAATTAGCAATGGCATTGATTTGACATCGACTTATGTATTTTGTGAATTGTGGGAATAGCAAGAAAAGTTATAAGTGAAAAATGATAAAGATATATTTGAAATTGCTTGTCGACCTATTATAGTGTAAAATATAAGCAAGGTCGACAAAGGCTTAATTTATGCGTTTAATTTGAATTTATTGAAAATGACATTAGTAATATATGCGAGATTTTATTAGAACGACAAATAACAGCTTTAGATTAGAGGTTTAAAGCTGTATATAAAATTACGG # Right flank : ATACGATACAATTATATGTTTAATTTTCTTGAAGATAGGATATGTTATTAAACAAAATAGTGGCTTTAAATTATGCGCTTTTGACAGGATCAATATGATTGATAAATGCAATCCCCTCCACGCAACCAACGCCACCACAATTCCCACTTTTCTGACAACTACAATTGGTGGAATCCACATTTTACAAGGATTATAATACATACATAACAACAGAAAGGACTGACATTATGCTACAGGAGAATCTTATTATGCTGAGGTCGCTTGCGGGTAAGACGCAGGAGGATATCGCAGAGATTATTGGAATATCGAGGCAGGCATATGCCAAATGGGAGCGAGGTGAAACAATTCCCGATATTGAAAAATGCGGCAGGCTTGCGGAATTTTATGGCGTGACGATGGATTCCTTAATAAAGGATAACGTGCAGCTTGAAGGGCAGAAGATGGCACCAGCACCGAAAGGCAAACACATGTGGGGAGTTGTTACAGTGAATGACCGCGGG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGTTACATAGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //