Array 1 15897-11234 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYTG01000072.1 Exiguobacterium sp. SH31 locus_contig000072, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 15896 32 100.0 34 ................................ CGCCTCCTCGTATCGTTTGCCCCCTGACTTCGAG 15830 32 100.0 32 ................................ TCAGTTCGCGCAAGATTTCGACGAAGCGACCA 15766 32 100.0 32 ................................ TCAGTTCGCGCAAGATTTCGACGAAGCGACCA 15702 32 100.0 35 ................................ GACACAAGCCCCGTCCCTTTCGTCACACGTAGCGT 15635 32 100.0 35 ................................ CGCTAGGTTTACAGGTACTTCAACAGGATGGGCGC 15568 32 100.0 33 ................................ CATTTCCCACTTGGCATCGTCCACCGCGCTGAA 15503 32 100.0 35 ................................ TTCGTGTGGCTGTCCCTAGCCATCAATGCACGCTC 15436 32 100.0 34 ................................ CGGGTCTCCCTTGTAACCGTTGATATGGACGCGC 15370 32 100.0 32 ................................ GAGAACATGAAGACGCTCATGGTCGTGTACGG 15306 32 100.0 33 ................................ ATCCCTACTAACGGGGGTTTGCAGGAGTTGAAA 15241 32 100.0 33 ................................ CTCGGACAATCAGACTAAAAGATAAATTTTATT 15176 32 100.0 36 ................................ AGCGAAAGAACAGATGAAGTTGTGATAGCCAGCGCT 15108 32 100.0 34 ................................ CATGTGTTGTGGATAGTCACGTACTTTGGCTTCA 15042 32 100.0 34 ................................ CTCCTTTGATAGTTGCAGATAAAGTTTGAGTAGC 14976 32 100.0 35 ................................ ATGTGAAGAGGATTGTCGTTGTGGAAGTGAGTTTA 14909 32 100.0 35 ................................ TACACGACAGACACCTCGGATACACGCGAACAAAA 14842 32 100.0 34 ................................ GTCATCCCTTCACACCTCGAAGCGGCTGTCCGTA 14776 32 100.0 33 ................................ GCGAAAGAAAAGCGCCGAAAAGCGGCGATGATC 14711 32 100.0 34 ................................ GGTATCAATACGGCGATATCGTGCGAGAAATCGG 14645 32 100.0 33 ................................ CGCGAGCGCGCCCATCGTCGCAAGGTTTTCCGC 14580 32 100.0 35 ................................ GTCGAAGCTATATCCAATCAATTGGATGAAGACGG 14513 32 100.0 35 ................................ GCCCCACCGATCATCGTGAGCTCTGCGTGTGACTT 14446 32 100.0 35 ................................ TTTCAAAGAAAAGTGGGGTTATGCAAACGATTATG 14379 32 100.0 34 ................................ CAATCGGAGGAGCGTTGCTTGCAATATGGGCAGA 14313 32 100.0 35 ................................ GAGGACATCGTGCTAGAGCGCACAGGATTGCTTGT 14246 32 100.0 34 ................................ AACGTGGGCGCTTCGGTGTCTCCGGCTTCGGGCG 14180 32 100.0 35 ................................ AACATCCGGTACGCCAAAGGGACAATCAACGGCGA 14113 32 100.0 35 ................................ GAGGACATCGTGCTAGAGCGCACAGGATTGCTTGT 14046 32 100.0 34 ................................ AACGTGGGCGCTTCGGTGTCTCCGGCTTCGGGCG 13980 32 100.0 35 ................................ AACATCCGGTACGCCAAAGGGACAATCAACGGCGA 13913 32 100.0 35 ................................ GAGGACATCGTGCTAGAGCGCACAGGATTGCTTGT 13846 32 100.0 34 ................................ GACGAGGTGGAGGGGTATTGTGACGCGTGTTATA 13780 32 100.0 34 ................................ CATGTTCATGGGCGAAAAGGTGACGAATAACTTC 13714 32 100.0 34 ................................ TTTCGCCGCCGTGTCACGCTCGTTCAGATATCCG 13648 32 100.0 33 ................................ CGTAAAACCTCCCAGCCGTATTTAAGGTGTGAT 13583 32 100.0 34 ................................ ATCGTTCGTTACGTTGTACTCATCCTACATGATA 13517 32 100.0 34 ................................ CTCAATGAGTACACGGGCATCAACATCTCGAACC 13451 32 100.0 34 ................................ TCTTGCGAAGCACCTTCTCCGTCTTTCGGATAGA 13385 32 100.0 35 ................................ ATCAATCGTCGACAACAAGGGCCAAGTGTTTGAAA 13318 32 100.0 33 ................................ AAGCAAGGTGACGTCATCAAGGTGTACAACATC 13253 32 100.0 34 ................................ GTCGACCCGACGCACTATTTTGACATCGCGTACC 13187 32 100.0 35 ................................ AACCAGACCATCCTCACCATCACGGGAGGCACCAC 13120 32 100.0 35 ................................ CCCGAAGAGGACGACACGGCGCTAGTCAACCGCTT 13053 32 100.0 33 ................................ GAGGTTGAGACGACCACAGAAGGCACGTATGAC 12988 32 100.0 34 ................................ ACAAGGGGCGAACGGGTTCTCGATCAACATTCAA 12922 32 100.0 34 ................................ TTAACCGACAGCACAGTCACGATCACGCCGCCCG 12856 32 100.0 35 ................................ AAGTCGAGCGATTACAACACTGTCGTCGCCGCACG 12789 32 100.0 35 ................................ CACCTTCTCAACCGGAGAGTTTGTGGCAGCCGCTA 12722 32 100.0 35 ................................ AACTCACCAAAGTAGGTATTCAGTTGCCCGGTGTT 12655 32 100.0 34 ................................ TACTTGGAAGATGCGAACGGGAACCCACTCGTCG 12589 32 100.0 34 ................................ TTAGAGGGGCAAGTTGAAAGCTACATCGAGCAAA 12523 32 100.0 34 ................................ ATGTAGGGAGTGGGAACAATGGGGAAACGAAAGG 12457 32 100.0 34 ................................ ATGATATGGACGTACTACCGTAACGGAAGGAAGA 12391 32 100.0 35 ................................ ATCACGACGCTCAAGAAGAACGAAGATTTTGACAC 12324 32 100.0 34 ................................ GTTGAAGAGCACATCAAGACCGCTCAAAACGTTG 12258 32 100.0 33 ................................ CCTTGGAGCCGACGGTAAAGTGCCCGCCTCGCA 12193 32 100.0 34 ................................ CCTTGGAGCCGACGGTAAAGTGCCCGCCTCGCAA 12127 32 100.0 35 ................................ AGCTATCCCGACCCGAACGAGCCGGAAGCGCCTAT 12060 32 100.0 34 ................................ TGGTAAACTCGTTTACCGTGGACTTGCGGTTGCC 11994 32 100.0 34 ................................ GCTACCATCCCCTCTGACTGTGCAATCCCTTTAG 11928 32 100.0 35 ................................ AATCCGGTGGGTGCATCGAAGAACGGTACGACACC 11861 32 100.0 34 ................................ TGCTTTCTCACGTTGGTAATCTGCAAAGACTGGG 11795 32 100.0 33 ................................ GTAGAAGGTGACGAGAGCCATCAAGCGATCATT 11730 32 100.0 35 ................................ TCGATTTCATTTCGCCCCAACAGCGACCCAACTCG 11663 32 100.0 33 ................................ GCATGCCCGTCCAACGTCTCACCGGTAGTCCCG 11598 32 100.0 35 ................................ AATACGGCCAAAACATAACGAGCGTAAGCGAGCGA 11531 32 84.4 33 .......TC.A...GA................ CTCGTCGGGCTCATCGTGCTCCGGCTCGTGACG 11466 30 90.6 35 ........A....-..-............... TATTAATCATGTCGAACATCATGGGCGCACGTCCC CT [11460] 11399 32 84.4 35 .......TC.A...GA................ TTCTCAACAATCGTGAACGACGGATCGCGTGAATC 11332 32 84.4 35 .......TC.A...GA................ ACATCGACCCGTTTCACGAAGAACGCGAGGATAAG 11265 32 93.8 0 G..............................A | ========== ====== ====== ====== ================================ ==================================== ================== 71 32 99.1 34 ATCGCACCTCGTGTAGGTGCGTGGATTGAAAT # Left flank : CAACTTTCCTATACAAGTGAGGGATGCATGTGCTCGTTTTAGTGACATATGATGTGAACACTATTTCACCCGGAGGCACGAAGCGGCTTAGACAAGTAGCGAAAGTTTGTCAGCAATACGGGCAACGCTTACAGAATAGTGTGTTTGAGTGTATCGTTGATCAGACAGAATTTACGACCTTGAAATTGCGGTTACAAGAGATTGTAGACGTAGACCGTGATAGTCTTCGTTTTTATAGACTTGGGAACCAACATGCATCTAAAGTAGAGCACTACGGAGTGAAAGAATCTTTAAATTTGGAAGGACCTCTCATTTTTTAAAGATGAAGGTGTTTTCAGTGAGTGCGAAGTTGTAGTGAGCATCATTTTCTAGAGAGGTTCGCACCTGATTTTTGTAGAGTATGTGTTTAAAAGATCAATGAATCTAGTCTTAAAAATACAAAAATAGGTGATATTGTTTATTATATTTATATTAGTCGGTTTTTTGATCTTAAATCGGCT # Right flank : GGCATAATCAGTATCATAAGCATTGACATTTCTAAGTGACTTACATCGTTTTTACAGGCAAATGGACGAATCTCTGAGGAGGTTCGTCCATTTGCCTGTAAATTAATTTCATGTTTGTTTAGTTTGCGCGTTTCAATTCTTTGTTTATATCTTCTTGTTTGAAATCAAGGTTTCGAACATCGACCCGTTTCACGAAAAATGCTAATACAAGCGCAAGTAAGTTCATCGCGAGCGCAACATAAAACGATACTTGAATCCCTGACAGTAGCGCTTGCTGCGTCATCGCACCCATTGCGCTTTCAGTGAGTGTCGACGGATCGACGCCGGTCATAAGTGACTCGGCTTCAGTCCGTGTCACCGAGTTCATGATGGTGACAAGCACTGCCGTCCCGATCGCACCGGATACTTGTTGTGCCGTGTTGTTGATGGCCGTGCCGTGCGGGTTAAGGTGTGTCGGCAACTGGTTGAGACCGTTAGTCATGATGGGCATCATGACCATC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCTCGTGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //