Array 1 23531-20992 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUGW01000010.1 Flavobacterium hercynium strain DSM 18292 43415_contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23530 36 97.2 30 .............................T...... TTTGTACCAACAATCTCACCGTTCCAATTA 23464 36 100.0 30 .................................... TATATTCTTTCTATTTATTGAAGCTGAGTA 23398 36 100.0 29 .................................... CCTTATCCAACAAGTTCAACATTCGAATT 23333 36 100.0 30 .................................... AAATGCTCGTCTGTTTTAGTGTTCCAAATA 23267 36 100.0 30 .................................... ACGTTATGGAAAAGAATATTTATCAGATAT 23201 36 100.0 30 .................................... ATTGGGGCGAAATAAAAGAAAACTCTATAC 23135 36 100.0 30 .................................... ACTTAGTTTGGATAAACTCAGGTAAACAGA 23069 36 100.0 30 .................................... GTCTGGTTTTTCCGGATCGACGTAAGGCTT 23003 36 100.0 30 .................................... ACTTTAGCCCTGTTCGGTTTAAACAGTTTC 22937 36 100.0 30 .................................... CTACTTCAAACCTTATCCATTGCAAGCCCT 22871 36 100.0 30 .................................... CCTGAATTCCAATTGCTACATTATAAGCCC 22805 36 100.0 30 .................................... TCCAAAAAACATTTATTTTACCAGGCAGGA 22739 36 100.0 30 .................................... TAACATATCCAGTTTTATTGCAATAAACTA 22673 36 100.0 30 .................................... TTTGGCAATAGATCATACGGCGTACATTGA 22607 36 100.0 30 .................................... TATTCAGAATGGATTGAATTTACATTCTTT 22541 36 100.0 30 .................................... ATTTGATGGAGAAACCTATTACAAGTACGT 22475 36 100.0 30 .................................... CACCTGCTGCAAGATATAAGATAACCGGAA 22409 36 100.0 30 .................................... TCAAAACCAATTACTTTAAAATCTTCGCAT 22343 36 100.0 30 .................................... CATTGGACGAAACGGAATTATTTAAGACCG 22277 36 100.0 30 .................................... TATATCTAACGAGGTTAATGCGTCTACTAT 22211 36 100.0 30 .................................... ACAAGTTATCTATTGGAAAGAGGAAACTAA 22145 36 100.0 30 .................................... TTATACTTCATTACATTTTATTTCTTTCAT 22079 36 100.0 30 .................................... CTATATTACATTTATTTATATCTTATATTT 22013 36 100.0 29 .................................... ATCAATCCTTCTTTAATATCTATCATTGC 21948 36 100.0 30 .................................... AAAAAGCTTCGCAGAAAGCCAGCGGGACCT 21882 36 100.0 30 .................................... AATAATCCTCCAACACCTCAGGGGTTTGGT 21816 36 100.0 30 .................................... TGTTCGGGATTGGCATTAGACCGGTCCCTA 21750 36 100.0 29 .................................... AGGGAAGAATGTCACGCCCGCATCAAGAA 21685 36 100.0 30 .................................... GTTGATACGGCAAACAGTGAGCCTTGGTAT 21619 36 100.0 30 .................................... TCATTTTTTTTTACATTATATTCTTTTATT 21553 36 100.0 30 .................................... TTGCCTTGTTTTATTTTTATCCTTCATTAC 21487 36 100.0 30 .................................... TATCCAAAAACAAAACCTTATCCCCACCGC 21421 36 100.0 30 .................................... TGATGTTTGGAATCAGTTAAAAGAAATGGT 21355 36 100.0 30 .................................... TACTTGACTCTATTGGAAAATGGGAGAACA 21289 36 100.0 29 .................................... TTGATTTGTTTACAACTACCGTAGTTTGT 21224 36 100.0 30 .................................... TTTGATCCTGCAAACTATTCAAAGCATCCT 21158 36 100.0 30 .................................... TTTCTGATCCGGATGCCATCAGGTATTTTA 21092 36 100.0 29 .................................... CCTTCCCAAAAATTAAGAGGTGCAAGCTG 21027 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 39 36 99.9 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : GAAAGGTTAAACAATAATTTGTTTAGAGTACAGAAGTTGTCGTCTAAATTTTATGAATTTAGATTAAGTTCTGAGTCATCGATACAAAATAATTTTCAGCCTTTTTATATTCGAATTAACAGTTTTGGTGATGGTAAAACAGGTTGGAAAACTTTTAAACCAATTAAAGTTAAAGTTTCTGTAAGTGGAAAAATTCAAAAAATGTAATTTCATTTCAAAAATTTGGTATGATTTTATATCTACTTAAATTGTTGATATGACATGACATGACAAAGTATATTCTTAACTACTCCTTATGAAGAGTGATTGAAAATCAGATTGAGGCAGAAGAATTTATTATCAAATTAATGTAGATAAAAAGAAAGAAGTGATTAAAAGTATTTGAAGGTAATATTATAACGGTTCTTTGACATAAATTTCCGAAATTTTAATTTCTAAAAAACAACTTAAAGATTAATAAAAAAAATATTTTTAGATTCGTATGGTAGGAGCATTTTCAT # Right flank : AGTTGGCTTGTTTGCTTCTCATATACAATGGTTTATATACGAATATCGTTTAGAAAAATGCCTCTTTTATGCTTTGATAATTCATAATTGAGGCATTTTTTCAATTGTAGCGTTTATTTTTTGAATGGAGACAGTAAATGTTGTTTAAATAATCAGTGTCAGAATAATTCAAGTTGCGTCGGTTGAGGAGCTGAGGGTTGAGCTGCTTTTCCCCAAAAATTCAAAATATTGCCAAATTGTTTATCGGTTATTCGCAGTACGCTTACTTTTCCTAGGGGAGGTAAAAGTTTATGAATTCGCTTTTCATGAACATCGGCACTTTCGCTGCTTGCACAATGACGCACATATACAGAATATTGCATCATCGAAAATCCATCTTTCAATAAATTGGTTCTAAACCCAGATGCATTTCGCCTGTCTTTTTTTGTTTCTGTGGGGAGATCAAAAAAAACAAACAACCACATTATTCGATATCCGTTAAGCTCCATAATGCTGGATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //