Array 1 2156251-2152380 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009788.1 Geobacter pickeringii strain G13 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2156250 29 100.0 32 ............................. GCCGACCGGAACAAGCGCGGGTTTCTCGACGT 2156189 29 100.0 32 ............................. TCCCAGAACTCGGTTTCGCGCTCGACCATCAT 2156128 29 100.0 32 ............................. AGTGGGACCGGATGGCGCCCATCTTGGCAGAC 2156067 29 100.0 32 ............................. CAGTCAGCCATATGTTCCCCAAATCTCCACAG 2156006 29 100.0 32 ............................. AATCTCCAAGCGGTCCTTGACCGCGCCAGAAA 2155945 29 100.0 32 ............................. CCGTTATGGCGAAACCGCCAAAATATCCGTTA 2155884 29 100.0 32 ............................. AACGTCTTGAGCTTCCCGAAGTCGACGAAGCC 2155823 29 100.0 32 ............................. AAGCGGAAATTCGCCAAGAAGGCGAGCGAAGA 2155762 29 100.0 32 ............................. CGATTATCCGTAGCAATAGTCATGTTGCTGGC 2155701 29 100.0 32 ............................. AACTCCACCTGGTCGTTGGACCCGAAGGGGTG 2155640 29 100.0 32 ............................. AACGGCAACAACGGCACCGCTTTGACCTTCGG 2155579 29 100.0 32 ............................. CGAGGTTGATTGAGAATGCTGAGGACTTCGCT 2155518 29 100.0 32 ............................. TTCGTCCGGGAATACCTGGAGAGTCAGGGAGA 2155457 29 96.6 32 ............................A GAGCATCCGGGGGCCTTTGCCGTCTTCCTTAC 2155396 29 100.0 32 ............................. GCGTCCTCTCCCTGCTGCCCGATTTCTGACCA 2155335 29 100.0 32 ............................. CAACGGAGGGCCTTCTAGGTGTTCGCGCAACT 2155274 29 100.0 32 ............................. CATCCCGTTCGCCTCGGTAGTAGCCAGGTTCC 2155213 29 100.0 32 ............................. GTGATGGTTCTGGTTTCCCCTTTTGAGGTCAG 2155152 29 100.0 32 ............................. CTCAAGACGTTCTTGGAGACGTGCGACTTCTA 2155091 29 100.0 32 ............................. TATGTCGCCAAAATGCAGCAAAAAGACCACTC 2155030 29 100.0 32 ............................. TAAGTGCAGATTTTACAGCTTCTTCCGACTCC 2154969 29 100.0 32 ............................. CCGTTATCCGCTTTTAAGTTCTCGCCACTGAG 2154908 29 100.0 32 ............................. GGAGATGGGTGATGGCACGGACTCGTGGTACA 2154847 29 100.0 32 ............................. CATCTGCAGGGGGGTTTGCAACAGCTACAGCC 2154786 29 100.0 32 ............................. GATGTATTTGATGATAGTGTGGTGTATGAGGT 2154725 29 100.0 32 ............................. AGATTGTGCAAATATCCATCGTCGAAGAATAA 2154664 29 100.0 32 ............................. ATTCCGGGGAACCTCCAGGGCGGGCAACGAGA 2154603 29 100.0 32 ............................. CCATTGCCCAGAACTGGGGCAACGTCCAGTTC 2154542 29 100.0 32 ............................. AATGAGAGGGCCTGAGTGATGAAGGTTGCGTC 2154481 29 100.0 32 ............................. GTGTTCTATCCAATCCCGTTGTTCGGTGGAGA 2154420 29 100.0 32 ............................. GGGAAGGTCATTCCGATGCAACAGGCGGGGTG 2154359 29 100.0 32 ............................. ATCAAAGAGCTCTTGCTGGCGCGGTAATTCAC 2154298 29 100.0 32 ............................. GTTGTTCGCCTTGGTAGAATCCCGCTGGAAAA 2154237 29 100.0 32 ............................. ATAAACGCATTCCGAACTGCAAAGGTCGAGAA 2154176 29 100.0 32 ............................. AGGAGTTCTGCGACCTCGGCGGTAACGGCACG 2154115 29 100.0 32 ............................. TTCGTCCGGGAATACCTGGAGAGTCAGGGAGA 2154054 29 100.0 32 ............................. GTGGCATTTGGCCGGTCCCTGAAAACCCCCGT 2153993 29 100.0 32 ............................. ACAATATTACCAAACCGCTTAGGTTATGTCAA 2153932 29 100.0 32 ............................. GTTGAATATTTACAGGAGTATCAGAAGGGATA 2153871 29 100.0 32 ............................. CTGGTTATGCCCTTTAGTGGGAGAGGAGAATA 2153810 29 100.0 32 ............................. TTGGCCCTGGAATCTGGCTGGACAATATCGTC 2153749 29 100.0 32 ............................. CTCGGGATCCACGGTGCGCAGTCCACGTCCAG 2153688 29 100.0 32 ............................. TAGGCCTTCGCCATGGAGACCTGACCAGTCTT 2153627 29 100.0 32 ............................. TAGTAAGTGGCCTAAACCCGCTGCCAGAGCGG 2153566 29 100.0 32 ............................. ACTATCCCGATGATCTGCAGCATGAGGATCCA 2153505 29 100.0 32 ............................. TTCAGGCTTCATCTCTGGCTGAATACTGAAAC 2153444 29 100.0 32 ............................. TTTGATGTTTTCCAGTGAAACCGATATGTGGG 2153383 29 100.0 32 ............................. GATGTCGGGGAAGGGACTTTACCCGGGCTTGC 2153322 29 100.0 32 ............................. ATGGCTATATTTGTGCTGTAGCAAACCTTCTA 2153261 29 100.0 32 ............................. CTATCTAGCTTCTTATTAGGTACACAAAAATC 2153200 29 100.0 32 ............................. TTTCAACTACTACATATCTTATGCCACATTCG 2153139 29 100.0 32 ............................. AATTTTAGCAGGGTGGTGGATACCTGCCCGGA 2153078 29 100.0 32 ............................. CCTCAACCGGTCCTCTCCCTGGCGGCGGCGAT 2153017 29 100.0 32 ............................. GTAGCACGATGAAGAGTTACATCGGGATCGAC 2152956 29 100.0 32 ............................. CGAATATCGTCGCTTCCGCGCTGATCGCAGTC 2152895 29 100.0 32 ............................. GAGCCCATAAAGACCAAAGGACGAACGGCATA 2152834 29 100.0 32 ............................. CCTTGGGAGACTGAACAACGTTCTTTTCCTTC 2152773 29 100.0 32 ............................. AAGGCATAACGCCAAGGCTGACCCGTCAAGAC 2152712 29 100.0 32 ............................. ACCTGGGACGGACAGCCAACAAAGGAATTGGC 2152651 29 100.0 32 ............................. GAGGATGCTGGTATCGGTTTCGGGAAACGGAA 2152590 29 100.0 32 ............................. GACGAGGGGCGGAAGTGGCGCATTGAGCAAGC 2152529 29 93.1 32 .........TT.................. AACCGGGGATCGTCATAGTGCTTCTGGTACTC 2152468 29 100.0 32 ............................. CAACAGTTGGGCGTGGACCGGGATCTCACTAA 2152407 28 89.7 0 ......................-....TC | ========== ====== ====== ====== ============================= ================================ ================== 64 29 99.7 32 GTGTTCCCCGCAGATGCGGGGATGAACCG # Left flank : AGATTCTGCACCGGATCATCCCCACCATCGAGCAAGTTCTGGCGGCAGGGGAGCTGGAAGTGCCGAAGCCGCCACCCGAATCGGTGGAACCGGCAATCCCGAACAAGGAGGGGATCGGCGATGCTGGTCATCGTGGTTGAGAATGCACCGCCCCGGCTACGGGGCCGATTGGCCCTGTGGCTTCTCGAAGTGCGGGCAGGAGTTTACGTGGGCAAGGTTTCGCGTCGGGTAAGAGAAATGATCTGGAATACTGTCGAGCAGGGAATCGAAGAAGGTAACGCCGTAATGGCTTGGAGCACCAATACGGAATCAGGGTTTGATTTCCTGACCCTTGGTGCCAATCGGAGGATTCCGTTTGAGTTGGACGGAGTGAAGTTGGTTTCTTTCCTGCCGGAGAATGCCGAAAAGCAGGTTGCTGAACCATGATGTGGCAAGTGAAAAAAGTTGGTAGCTTTGAGCTCTTTGAAAATTAAATGTAATTTCAAAGTGGTAGAAGAAGT # Right flank : AGGACCGGCAAGAAGGGTAGCGGTGAATCGCCGAGAAGAGTAGCTATATTATGTGTTGGGCAAAAATTTGACGCTGATGAGAAGTGAAGTCCAATGCTGATCTGAGAATTTTGCAGAGGACATCGAATCAGGATTTTGTTGGCGTCTGACTGGCAATTACGGTGACAGTGGGGCATGCCAATTAATTTCAATGTTATAAATATTACTATGTCCCCAAACTTACCCTATTTCGGTTGCTCTTGAATGAATTGACCCGGTTAGATTCGGACTGACGACAAACGGATCGTCGGGCTGATGGTTAATTTTTCTAGGTAGTTATCGCTGTTTGTTGTAACGTGCTAAAATTGCTAGGCATTTTCGAATCCCGTTTCCCGCTCCATTAAAAACCAACTGTTTTCAAGCGGTTAGCCCCATCCAGCCCTTGTGTCTCACTGAAAGTCTCACTGTGAGGTACAAGGGCCGAAGCTTTTTCGGGATTCAGGAAGTCTTCCCCCAGATAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCAGATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2420932-2418756 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009788.1 Geobacter pickeringii strain G13 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2420931 37 100.0 34 ..................................... ATCATCTGGCAGGAGTCCCGCTTATGATTATCGG 2420860 37 100.0 34 ..................................... ATACAGCCTCCTTTAGACAACGTATATTTTATAA 2420789 37 100.0 35 ..................................... CGAGAGATTAAGCAGCCTGCTTCATCTTCTGCGGC 2420717 37 100.0 33 ..................................... ATCCTGGAGTCCGACGCCGGTCAGGCCGCGTGC 2420647 37 100.0 34 ..................................... TGCCAGATTGGATCACGCATCCCTGAGTTGTCCC 2420576 37 100.0 34 ..................................... TATGAAGGAGAGGAACGTTTCGCCCTGGGCGCGG 2420505 37 100.0 33 ..................................... AGCCTGCGACGGTCGGCTCCGAGGGGAGCCCAG 2420435 37 100.0 37 ..................................... AAGCTGTTGCACGATTTCCCGCCGCCGCTCCCGACCA 2420361 37 100.0 33 ..................................... ACGTAAATCTCGCGGCGGTCGAAGTCGATATCC 2420291 37 100.0 34 ..................................... AGACCGCCATAGAGCAGATCATCGAAGAGCAGGG 2420220 37 100.0 33 ..................................... TCGCCAACGTTGGCGGTTTTTCCCTGGGCTATC 2420150 37 100.0 33 ..................................... TGGATGGATTCGCCCATCTGGTAAAAATCTAAG 2420080 37 100.0 34 ..................................... CACCCCATCCCGGCGGCATCGAAGGAGGTCCTTT 2420009 37 100.0 35 ..................................... CACGATCAGGAGCGGCAGAGTGATGGTTGCCGCCC 2419937 37 100.0 34 ..................................... CGGTGCGATCTGTTGCGAACGTGCCGCCGCGATG 2419866 37 100.0 34 ..................................... TGTCGGAAACCTTTATGGCAGCGATGTAGCCGAT 2419795 37 100.0 35 ..................................... TCATTGAACTCGCCAATAATGAACCGATTATCCGG 2419723 37 100.0 33 ..................................... TTAGCCATAGGAACCTCACTCGATGGAATACTC 2419653 37 100.0 33 ..................................... GAGGAGGGGAAGATTGAGGTGTACCGGCTGCGG 2419583 37 100.0 38 ..................................... ACGAATCACGGGTGAAGGGGGTTGTGGCGTTGGCCGAG 2419508 37 100.0 36 ..................................... CAAAAAGAGGGGGTGGTTTCCCACCCCCCATCACAG 2419435 37 100.0 36 ..................................... CAAAAAGAGGGGGTGGTTTCCCACCCCCCATCACAG 2419362 37 100.0 36 ..................................... GATTAGGGCGGAACATCCTACGGGAGATAAGGTCAC 2419289 37 100.0 34 ..................................... ATATTTATACGTGGTAGACTCTACAGGAACTCCA 2419218 37 100.0 35 ..................................... TGCATTGTGGATGACCCACTTAATCCAAAAAAAGC 2419146 37 100.0 33 ..................................... GCCTCGGTCCCCGAAACAGGGGGCCGGATTGCC 2419076 37 100.0 35 ..................................... TTCTCCTTTTTTGCTTCGTGCAGGAACATTACGAC 2419004 37 100.0 35 ..................................... TCCAGAATCAGCATCAGAAGCGCCAGATAGGCGTT 2418932 37 100.0 34 ..................................... TTGGCTGCCGACGAAAACGCCGCCGCTGCCGAAC 2418861 37 100.0 32 ..................................... GCCTATGACACCCCGGATGATCTGGAACCGCT 2418792 37 97.3 0 ...................................T. | ========== ====== ====== ====== ===================================== ====================================== ================== 31 37 99.9 34 GTAGCGCCTGCCCTTCGGGGCGGGCGAGGATTGAAAC # Left flank : CGGTGCTCTATTCCTAGGGGGATCGTATGTGGATTATCGTTGCCTACGATGTGAACACCGAAACCAAAGCCGGAAGAAGAAGGCTTCGGCGGGTGGCTCAGGTCTGCAAGAACTTTGGCCAGCGGGTGCAGAAGTCGGTGTTCGAGTGCCAGGTAAGCGAAATGAAGTTTGAGGAGTTGCGGCGTAAGCTCTTGAAAGAGATCAAGAGAGAAGAAGATAACCTGCGTCTGTATCGTTTGACCGAGCCGAGGGATGACCACGTGGAAACCTATGGGCTTACCCGGACGATATTCTTCGACGATGAACCGCTTATCGTCTGATCCGCGAACCTGGTGCCCACGAGCAAAACCGGGAGGATTCGCAGTGGAGAGAACCGTTGGATATTACGCAGATATTGAAAGGAGCGTGTGGAGCTTCCATGCCCTGCTCAGGCATGTCATGACAGGTTCGCGAAATTATGAGGGTAACCTGTCGAAACTGTTGACCCGATGAGGGTGACG # Right flank : CTGCGGTTGCGCCGATGGCGGCGCTACTTGAGCAGAATGCCTGCGATGCAGACGAGTGTCGCGGTGAGAGCAAAGGCGAGGATGGAGACGATGGCGAAGATTCTTTCGGTCATAGCGATATTCTCATGCGAGTTTTCTTTCTTTATCGTCATGGGAGGAGAGAACTTGAGGGGCTTCTTGCGTAAAAACGGACTATTTTGGTTGTAAGGGAGAGGGATGATGGACGTACTTGAAGCAATCCATACCCGCCGCAGCGTGCGGCAGTTCACGGCGGAGCCGGTGTCGCGCGAGGAGGTGAAAGAGATCCTTCGCGCCGGCGCCAGCGCACCGTCGGGACTCAATAACCAGCCGTGGCGGTTTGCCGTCGTGCGGGGCGATGAAGTGCGCCGGGCCTTGGCGGGGCTGACGAAGTACCGGCACATCGTGGAGGGGGCGCCGGTCTGTATCGCGGTCTTCTGCGACCGCGACGTCATGTACAACGATACCAAGGATCACCAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGCCTGCCCTTCGGGGCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.70,-17.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //