Array 1 2441370-2438720 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069946.1 Klebsiella pneumoniae strain FDAARGOS_1325 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2441369 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 2441308 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 2441247 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 2441186 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 2441124 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 2441063 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 2441002 29 96.6 32 ...............A............. GATCTTAACTCTATTGCCAATGGCGCAATTCA 2440941 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 2440880 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 2440819 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 2440758 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 2440697 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 2440636 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 2440575 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 2440514 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 2440453 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 2440392 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 2440331 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 2440270 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 2440209 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 2440148 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 2440087 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 2440026 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 2439965 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 2439904 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 2439843 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 2439782 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 2439721 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 2439660 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 2439599 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 2439538 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 2439477 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 2439416 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 2439355 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 2439294 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 2439233 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 2439172 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 2439111 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 2439050 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 2438989 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2438928 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 2438867 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 2438806 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 2438748 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //