Array 1 249196-252513 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJUX01000003.1 Klebsiella pneumoniae strain EuSCAPE_PL011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249196 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249255 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249316 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249377 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249438 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249499 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249560 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249621 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249682 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249743 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249804 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249865 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249926 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249987 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250048 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250109 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250170 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250231 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250292 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250353 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250414 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250475 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250536 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250597 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250658 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250719 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250780 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250841 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250902 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250963 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 251024 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251085 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251146 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251207 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251268 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251329 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251390 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251451 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251512 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251573 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251634 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251695 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 251756 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 251817 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 251878 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 251939 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252000 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252061 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252122 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252183 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252244 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252305 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252366 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252427 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 252485 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 55 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //