Array 1 209560-205986 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMYV010000010.1 Fibrella sp. HMF5335 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 209559 29 100.0 32 ............................. CAGGCCAAAAGCTTGACGGGCCTTGCCTCTAA 209498 29 100.0 32 ............................. TTCATGCTGCGTGTTGTTGTGGCCCGGTCGTG 209437 29 100.0 32 ............................. TTCAGCGGGCGAAAGACAACTACGAAGCCGGA 209376 29 100.0 32 ............................. TACAGCAGTCCCTTGCGTACCTCCACCCGGTC 209315 29 100.0 31 ............................. CGTTCAGCGTACCCACGGCCCCCTCCATGAT 209255 29 100.0 32 ............................. AACTAGGGGTTCGGACGGAAGAAACCGTAGAC 209194 29 100.0 32 ............................. ATTGCTCCACGAAAACCGACCGTTATCGGTGT 209133 29 100.0 32 ............................. CGGTGCTGCGCCTCCACGGGCGTACCATCGGC 209072 29 100.0 32 ............................. TTTGCGGAGTTGGTACTTTTCGACGGCTCGTA 209011 29 100.0 32 ............................. AACCTGGCCTCGGCGCTCATCAATCAGAATCA 208950 29 100.0 32 ............................. CTACGCCAGCTATGTAGACGGTAGTAATCTCA 208889 29 100.0 32 ............................. CCCCCGGTTAGTCGGGGTTGGGTGGTGGAGTG 208828 29 100.0 32 ............................. GTGACGTCGTTGGGAACGACGGTATCGTAGGG 208767 29 100.0 32 ............................. TCTCCATTCGTGCCAATGGACCCGTTGGGGGC 208706 29 100.0 32 ............................. GCATCGAAGTTATCTACCTGCTGATCGGTCTT 208645 29 100.0 32 ............................. CAGAACCACGTCTTGTTAAAGCCCGCCGTGGT 208584 29 100.0 32 ............................. CCCAAATCGTGACAGGCAATTAGCAGGCTACC 208523 29 100.0 32 ............................. GCCACAAACTGCTGATGCCGACCGACAAGCAG 208462 29 100.0 32 ............................. ACCCCCTAAAGCCGGGCGTGATCCACGGCATT 208401 29 100.0 32 ............................. TAGACATTACGCCGCCGCCAAACGTGGGGCAA 208340 29 96.6 33 ............................A GGCCAGCACAAACTACAAACACGTAGCCAGCCC 208278 29 100.0 32 ............................. CAATGGCAGCAATAGATTCAACAATGGATGTT 208217 29 100.0 32 ............................. ATGGGCCGTTTACGCGGCCTTATTGGGTTCTA 208156 29 100.0 32 ............................. TCCACCTGAATCAATAACCTGTATTATCCATT 208095 29 100.0 32 ............................. CTCAAAAACTTTGCTTTTGTGTTGCTCTATTT 208034 29 100.0 32 ............................. AACACGAAGATTTTGTTATGCTAAATGACTTA 207973 29 100.0 32 ............................. AAGTCCCAACACATGCAGGGACAGGCAATAGA 207912 29 100.0 32 ............................. AGTTAGTAACCGGCAGAGAAATCAATCTCTGG 207851 29 100.0 32 ............................. AAGCCCGCGCAAAGCCCGCCCGACCCCGTGAC 207790 29 100.0 32 ............................. GCGGGTGGATATTTGTTAAGAAATTCATACCC 207729 29 100.0 33 ............................. GATGCGGCCAAACTGTTGTTAAAAGTCCAGAAA 207667 29 100.0 32 ............................. TCGGGCAGGGAGAAGGTAAACAGGCTGCTTAA 207606 29 100.0 32 ............................. TTGGTGTAGACGCGAACCATGTTGGCGTACTG 207545 29 100.0 32 ............................. CACCTGTCGGGCATATTTTTTCGGTCGGATGC 207484 29 100.0 33 ............................. ACCGCCCCTTCTGCTTTTACCTTTTTGTCATAC 207422 29 100.0 32 ............................. GCCCGGTCTTTGCAGTGCAGCTTCCAGCTACC 207361 29 100.0 32 ............................. CTGACCGGGGGTAGTGACAATTCGCCACCGCC 207300 29 100.0 32 ............................. TGAACACTGATCCTCTCCCGTTGATTATTCCG 207239 29 100.0 31 ............................. ACATTCGTGATATTGCTGCTTATTGGGGTGT 207179 29 100.0 32 ............................. GGTTGGATACAGTTCACGCAGCAAGGAGGCGA 207118 29 100.0 32 ............................. TGTATCAGCAGGGGCAGCCCGTCACACTGTTT 207057 29 100.0 32 ............................. GCACTGCGGGGTGATGTTCTCGCCCAGCAGAA 206996 29 100.0 32 ............................. CAGGGAAATCGAGGAAGACGAATGGCTATCTG 206935 29 100.0 33 ............................. CCCGACATACCGTTAATGCCGGGGCCTTTGTAG 206873 29 100.0 32 ............................. TTGCCCCGCCCCGCCCGCGCGTTACCTATGCA 206812 29 100.0 33 ............................. CACTACCGGCAGATGAAGGAGGAACAGGCCCGC 206750 29 100.0 32 ............................. ATGATACGGAACGCCAAAGAGGGCGAACGGCA 206689 29 100.0 32 ............................. AATCGACGCCCGTCACCACGCCGCCCGGCAGC 206628 29 100.0 32 ............................. TTTCAGGATACCAAGCGGGACATCGAGAAGAA 206567 29 100.0 32 ............................. GATACGTATGATAGCCCCCTGCCGACCGACAC 206506 29 96.6 32 .....T....................... CAAGGGTTACGTCACCATCGGCGCGATTGAAA 206445 29 100.0 32 ............................. GCGTTGTTTTGACATAGTTGTAGAGTGTTAAC 206384 29 100.0 32 ............................. GTCTACTGGCCGATTTGGCTCCTGGGTTTTCG 206323 29 100.0 32 ............................. ACAAAAGCCCGCATAACGCTGTGCGCTATACG 206262 29 100.0 33 ............................. GATACCAGTGCCGCAAACGCGCCGGTTATCTTC 206200 29 100.0 32 ............................. GCCTTAATGCTAATTCGTTGCTTCGCTACCTC 206139 29 100.0 32 ............................. ATCAAGCCGCCCAAGCATCCGGCGTCCTGGAT 206078 29 100.0 35 ............................. AACTCAGGCGATGGCCGCGGCTTCATGATCTGTAA 206014 29 86.2 0 ...........GC.......A....C... | ========== ====== ====== ====== ============================= =================================== ================== 59 29 99.7 32 CTATTCCCTACATGTGTGGGGATGAACCG # Left flank : AAGCGGTGCCGCGACGCGTTTACAAACCTGCGCTTATTGCAGCGTATCGTGCCTGATGTGGATCGTCTACTGCGGCTGGATGTAGAGCCCGAAACTCCCGACGGCTTCGATCCTGACGAAGACCCGGCCTTACCAACGCCATGGTGGAGCAACCCTAAAACACAAAAATCATGACAATTTTAATTGTTGAGTGTGTGTCACCTTCCTTACGGGGCGATCTCAGCCGCTGGCTTGTGGAATTACAGGCAGGCGTTTTTGTAGGACGTGTTAGTGAAGTTGTACGCGAGGCACTTTGGGAACGAGCCACCAACCGCGCCGACGATGGGACAGTACTACTACTTTGGCGGACCAACAACGAGCAAGGCTTTGATATGCGTTCGTGGCAACCCAAGCAGTATGTGCCAATCAATGTTGAAGGACTGTGGTTAACCCGCCATCCTGCGTCAACACATACAGGATGATTTTATCAAAAAATCCTCGTTTCCATGTAAATTTCCAGT # Right flank : TCACCACGCCACAGAGGATGAACCAACGCTAGTTGGACCATATTTCGCATCGAGTAATGGATATGAGTTGTACTTATTAAAGTCTGATTCTACGGTCTATCATCTGTTTCATTTTTACTTATGTTTGTAATAGACCAATCAGTTCAACTATAGCAAAAGACTTCAAAAGACATACATAGTAGCGTTTAACGACACTTCCTGCCGTCGAAATCTGGTAAATTTTAGTGCAGGGGAGTGAGGTTAAATGCCCCGCGTCATGGCGCGGGGTGTTTGCTTCATTCTTGTACAAAGGTTTACCAGAACCTCGACGGCGGAATGATTGCAACCCCCGCGCTATTTTTTTGTGTCTGTTGAGGGCGTCACTCAACACATGAAAACATATTTTACAGGTTCAGGTACATCGTCCCTGTACAATCGCTCAACCACCGAATTTGGCTTTAGATATACCTCACGAGGTACTACACAAGGAAGCAATTCCGATGAGCTAGGATTAGGCTATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTCCCTACATGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 220542-224718 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMYV010000010.1 Fibrella sp. HMF5335 10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 220542 29 100.0 32 ............................. CTGTGAGCATGCCTGGGCTGATGAGGACTTAT 220603 29 100.0 32 ............................. TTCCTATGAACATAGATCGGATTTTGTACCCC 220664 29 100.0 32 ............................. GAGGCCGAATTAGCCGAACAGCGGCTAGACAT 220725 29 100.0 32 ............................. GATGGGCAACAATCTGTCTTTTAACAAAAAAG 220786 29 100.0 32 ............................. ATAGGCCCGCAAACGGTCGGCGCGACGAACAA 220847 29 100.0 32 ............................. ATGTACCCAAGTACTGCGCGATGCCCTGAGTA 220908 29 100.0 32 ............................. CGTGAGGATCTGCTCGGCAATCGTGCCACTCG 220969 29 100.0 32 ............................. ACAGAAATCGAGTTTGGCGAGGAGGCGGATTA 221030 29 100.0 32 ............................. ACAGGCGACAAGCCAGCAGATTGTTTTATCAC 221091 29 100.0 32 ............................. CCCATTTGCGGGCGGCGGGCTCGAGGGAGATT 221152 29 100.0 32 ............................. CATTTGCATTCGCCACGACGCCACCGATGAGC 221213 29 100.0 32 ............................. TCGGGTCATACCGTTGAACAAAATCTTGCCAC 221274 29 100.0 32 ............................. TGCCGCATCCGCATGGCGGGCTCAGCCACCGA 221335 29 100.0 32 ............................. GCGTTGGGCATCGGCCTAATCATTACTGCTAT 221396 29 100.0 32 ............................. CAATTGTGATAGACTAGGACCTGAAACGGAAT 221457 29 100.0 32 ............................. CTCTACGAAAGGCTTTGGGCAACTCCGTACGC 221518 29 100.0 32 ............................. CAGCTGCTGGCCCACCCCACCTACAGTCAGGC 221579 29 100.0 32 ............................. CCCTGAGCCGTGCCAAACCAAGCCACCCAAGC 221640 29 100.0 32 ............................. GTGGTTGGTTGTCCTGGTACGGCCTTGTTGTT 221701 29 100.0 32 ............................. TAACCCTGGAAGACGGCACGGCCGGGCTGGTG 221762 29 100.0 32 ............................. TCCGATCAGCAAAAGCAAATCGGTAATGCAAA 221823 29 100.0 32 ............................. CAATCGCTCCCTGTTTTTTTGAATAAAATCCA 221884 29 100.0 32 ............................. ATTACAGGACAAAATACCACACATGAGCGCAA 221945 29 96.6 32 .......................T..... CATTACACGGCCTGTAGGCCAATACGTTACAC 222006 29 100.0 32 ............................. AACGAATCGAACACAGTGTCTTCTTTCCAGTA 222067 29 100.0 32 ............................. CGGTGCAGGGCCATGTGGCAAGCTGGTGACCC 222128 29 100.0 32 ............................. ACAGTCCATTTCGAGAGTTTAGGTTTCGTTCA 222189 29 100.0 32 ............................. CCACGACGGGCATTAAAAACGCCTTTGAAAAC 222250 29 100.0 31 ............................. CTGGGATAAAATCGTGGGGGCCGACCGCTAC 222310 29 100.0 32 ............................. AGCCAATACCGCAAGCCATTTTAACGGCTGCA 222371 29 100.0 32 ............................. AATTCATTCCTGTAGCTGTTCCGATACAGCCT 222432 29 100.0 32 ............................. GTGAGCGTGCTGTTTAAAAAAGGGCTTAAACC 222493 29 96.6 32 .............A............... ATCACATATAACCCTAGTGTTTATGACGAAAT 222554 29 100.0 32 ............................. AATGGTGGTAGCCCGTTTGCCGATGGTTTTGT 222615 29 100.0 32 ............................. TTGTCGATCTGTTGATCGACGTGGATTATGTG 222676 29 100.0 32 ............................. ACAGCCGTCAGCAGCAGCTGCGCCAGGCGGGC 222737 29 100.0 32 ............................. CCGCCATCTACCGGGCCATCGCCTTGGCATGG 222798 29 100.0 32 ............................. GCATACGAAGATTAGCCACCAACTAACCACCC 222859 29 96.6 32 ....C........................ GCGATGTCGCTCCCGGCAATGCCCGAGGTGTC 222920 29 100.0 32 ............................. CAGATCGCGTACTTGGCCCCCACGGCGGTAAT 222981 29 100.0 32 ............................. ACTGTAGTTTATTGGGTTGCGTCAAGTCGTTA 223042 29 100.0 32 ............................. CACAAAGCCGCCCACGTGGCCTCCATCAAGGA 223103 29 100.0 32 ............................. AGCCAGCAGGAACTAGACAACCTTACCAAAGG 223164 29 100.0 32 ............................. GCCGTGGCTAAAAATGCGAAGGTGGTGGCCGT 223225 29 100.0 32 ............................. TTGCCCGGCTTTTCAGCGACGAAGGGCAGGAC 223286 29 100.0 32 ............................. ACCTCTGTAGGGTCTAATTTGCCCGTCATTAT 223347 29 100.0 32 ............................. ACGATATTTTGGCTTAAGGTTATCGGTAGAAA 223408 29 100.0 32 ............................. ACTACCCAAGGCGCGGAAAGTCTTTCCAGTGC 223469 29 100.0 32 ............................. GAGGTAGCCAGCCAGATATTTCCGACACCGCC 223530 29 100.0 32 ............................. TCAATGCCGAGCGTTCCGCCAATAGTCCGAGC 223591 29 100.0 32 ............................. TTCTTTAGTGTTCCTTGTGAAAATCCGGTTTG 223652 29 100.0 32 ............................. GTCATTGTCTTCCATGAACTGGGCAATAGCGG 223713 29 100.0 32 ............................. GCTTGGACTTGCCAGCAGTTGATGCCGTGTTG 223774 29 100.0 32 ............................. ATCAGTAGCGCCCTGGCTGATTTTGACGTGGC 223835 29 100.0 32 ............................. GCGTAAAGATGCTGGAAGACTTGAAAGACCAC 223896 29 100.0 32 ............................. GCCTAAGCGCCTCGACCGAAGGTACGCTTATC 223957 29 96.6 32 ..............T.............. CCGCGCTTCGTTTTCTTTTCCAGATTGTAATA 224018 29 96.6 32 ...............A............. GATACAAGGCCAATCTTCACCGCGAACCCGCT 224079 29 100.0 32 ............................. CCCTCCGGCACATCGACCAGCCCTCCGGTGCC 224140 29 100.0 32 ............................. ACGCCAACCGCCTGCTGGGTTGACGTGGCGAC 224201 29 100.0 32 ............................. GCGCGGGCGCAACCCCCGAAAACAGGGGTGGT 224262 29 100.0 32 ............................. TGGGCATTAACCAGTCGCAAACAGATTGCGTG 224323 29 100.0 32 ............................. AACTCGGTCTCTTCGTCGTCGGCCTGCGTTAG 224384 29 100.0 32 ............................. GATAGCCAGTATTTGCGGGCGGGTTTGGCTGA 224445 29 96.6 32 ...........G................. TGTAACTGTGACCTTTGGGCCTAACTATCAGA 224506 29 96.6 32 ...........G................. ATAGCGGACTGGGACGCGGAAGGGCTAGACGA 224567 29 96.6 32 ...........G................. GTCTTCCGGGCAATTTTCGTCGATAAGTTATA 224628 29 82.8 33 .......T...GCTT.............. CAGGAGATGGAGTACGTTTACGCCAAGGGTAAC 224690 29 72.4 0 T..C..T....GC.T....A.......T. | ========== ====== ====== ====== ============================= ================================= ================== 69 29 99.0 32 CTATTCCCCACAAGCGTGGGGATGAACCG # Left flank : AGCCAACCCTACCAAAAAACAGAAGATTAACGGCCGGGAGCAGGGTAAACGTGTAGCTCTGCACGACCTGCCCGATCCCGACGCTGCTGATCCCGATACACCTACGCCCGCCCGACTATGGCTAACGCGCAAAGCGGAGCAACACGGTTTTCGGGTGGTTTATACCCTAACTGATGGATTCTGGTTAGGTGAACCCAATGGAGATGGAGCACGTGGTAAACCGCAATTACCTCATTATGGCGTTCGTTATGACGGATTATTGCAGGTAACAAACCCAGATACACTGACTAAGGCATTAACAACAGGCATTGGTCCAGCCAAAGCATTTGGATTCGGTTTATTGTCCGTGGCTCGTCCTCAATAGTACTGCTAGTTAAACATATACATGCCCCGGCAGGACGTACTGACCTCCTGCCGGGTCACTTGTGTTGTGCCAAAATGCACCGACACTAAACCGTTCATTGACATCTAAAAACCGCGTTTCTGCGTAAATTTCCAGT # Right flank : GGACGGTTCGCCCCAAGGTTGCCGAAATTAGCCATACGCTATTATGCTTGAACGGCGTATTATGTCTGTCGTCGCAATTACCCCTTCGACTGACTTTCGGTTTGTAGATTATCTGTTATTTAGTCTTCAGACGTTTGATCGTCCTGTCCCTTCAATTCTTTCTGAATTTCAGCGATTAATTGCTCTTCAGTCGGCAGGTGCAACTGGTACTTGCTGGCAAACAGTTGTGTGTTGTGTTCAGGCAGGGTGTAGCGCACGACTGCATCGTTCTTGTCGGCACATAGTAATACGCCAATGGTTGGATTCTCGTGAGGCTCTCGAATGGCCCGGTCGTAGTAGTTGACATACATCTGAAGTTGACCCAGATCCTGATGGGTGATCTTGTCCATCTTGAGGTCTAGCAAGACGAAGCATTGTAGGAGCCGATTATAAAATACCAGATCAATTTTGAACTCATCGCTCTCAATGAAAAGTCGCTTTTGGCGGGCAACGAAGGAAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTCCCCACAAGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCACAAGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //