Array 1 492235-489450 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEND01000003.1 Halegenticoccus soli strain SYSU A9-0 contig003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 492234 30 100.0 36 .............................. AAGGACCCCGCACCGTCTTGCACCCGTTCGACATGC 492168 30 100.0 36 .............................. TGGAGATTATCCTTGCGCGCGGTCACCGACACGAGC 492102 30 100.0 37 .............................. ATCGTACTTACAAAGGTGGTATGTCTCCTCAAGGCTA 492035 30 100.0 36 .............................. TTCTTCGGCAAGCAGCTTGAGCGTCTCCTCGGGGTG 491969 30 100.0 37 .............................. ACGATCTCGTTTTCGTACCGTTTTCCTTGCTTGCTCA 491902 30 100.0 35 .............................. AACACGCCAACACCGTACAGCGACCCCGCAGACGT 491837 30 100.0 35 .............................. ACCAACGGCCTCCGCTTGGCGGGCATCATCCTCTC 491772 30 100.0 36 .............................. GACCCACGCGATAAGCGAACTGAAGTCGCGTTGGAC 491706 30 100.0 35 .............................. GAAGTGGGCGGACTCACCCTGCACGTGGTCTCGTT 491641 30 100.0 36 .............................. CCCGCCAGGAAACAACTGGTGAAACGGACGTCATCA 491575 30 100.0 35 .............................. TTCAATGACGACAAGGCGGCGCAGAAGGCACGCGA 491510 30 100.0 35 .............................. TTCGCGTACTCGTTCAGGTTCTCGCCGTACCAGCC 491445 30 100.0 34 .............................. ATGATGCAGACGGCACACGACTCGGTGAAGGGGT 491381 30 100.0 37 .............................. ATGAGCGCCGGGACGACGACGTCGACGGTTTTCATGA 491314 30 100.0 37 .............................. GCGAGAGAACTGCGATTTATCGAGCGTGAGCTCTTGC 491247 30 100.0 35 .............................. CACGCCCGAATGCATGTCGAACGGGTGCAAGACGG 491182 30 100.0 36 .............................. TTCGTCGCGCCGGTCGTTATGTCGCCCTCGCCGATC 491116 30 100.0 35 .............................. CGCCTCGGCACCGACGCGCATGCCCTCGAACTCCG 491051 30 100.0 34 .............................. GCATTTGATTCGTACGATCAGCACGGGGACCCCC 490987 30 100.0 35 .............................. CGTGTGAACAGGAGTTCGAGCGAGTCGCGGTGCAC 490922 30 100.0 35 .............................. TCCTGAAGAGCCATATGTGTGGGTAAGTCTTGGTT 490857 30 100.0 35 .............................. CACTTGGAGTCTCAATGTCGGTTATGCCCGTCTCT 490792 30 100.0 37 .............................. TACCGACGGCGGCCGAGGACTGTCGCGATCACACCGG 490725 30 100.0 38 .............................. CGGAACGGCCTCGCGTTTGCCAAGCGCGTCATGCCCGC 490657 30 100.0 35 .............................. CCGGTGATGACGTAGGCACCAAGGTCGCTTGTCGC 490592 30 100.0 35 .............................. ACAGCCGTATCCCGGCCGTGGTCCGGGGGACAAAG 490527 30 100.0 35 .............................. CCCCATAGGTCGCCCGGGTCGGGGTCCCAGACGAA 490462 30 100.0 36 .............................. CCCTGGTGGTAGGTGTCCGAATCCTTTGAGACACCG 490396 30 100.0 35 .............................. ACCGGAGAACTGAGTGAGATGGGGATCGATGTCAC 490331 30 100.0 35 .............................. ACCGGAGAACTGAGTGAGATGGGGATCGATGTCAC 490266 30 100.0 36 .............................. ACGGTTCCAGCACGTCCATTTCGGCTGGATCTGTGA 490200 30 100.0 37 .............................. TGGGTCTCGGGCTAACGGTTCGGACGCAACATCCTGG 490133 30 100.0 36 .............................. GACTCACCGGGCAATCGGCGGCAAAGACGTTCGAGG 490067 30 100.0 36 .............................. AACCAGACGAAGGGCGGCCGCGAGAAGCTAGAGGTG 490001 30 100.0 35 .............................. ATGAACACCGTTCGTGACCGCGTCCACGAGCTCCC 489936 30 100.0 35 .............................. GATGTAGCCGCCGGTGTCGAGCTGGGGGAGTCGGA 489871 30 100.0 35 .............................. AGAGAAAAGTGGACAGGGCTTAGTCGTCCCGTCCA 489806 30 100.0 35 .............................. TCGATCTCGACCTTCACCGGGTCTCTGGCGACGTA 489741 30 100.0 34 .............................. ACGAGACGAATCAGTCCGAGCAGCCCGAGTACTT 489677 30 100.0 37 .............................. TCCTCACTACTACCTACGGGATACATTGACTTAAGCT 489610 30 100.0 37 .............................. TTTAGCGTATACCCGTCCTTCCATGCGTGACCGAACG 489543 30 96.7 35 ........T..................... TCGGGCATGGGCGAGAAGATGAAGTCCGCCGGGAT 489478 29 86.7 0 ........T................-.C.T | ========== ====== ====== ====== ============================== ====================================== ================== 43 30 99.6 36 GTTCCAGACGTACCCTCGTGGGATTGAAAG # Left flank : GTGAACGCCATGACTGGAAAAGAGAGTGTGAAAAAGCGGGTAGAATTCGGTCTGTGACAGCTCAAGTTGATAGAAGCGGGCCGACGAATCTGCCGAGAGACACGACAGATAATTCACCACAGAGGATTCTTGAGCACTGGCTTCAAATCGGTCGAACTCGTCACCGCTTGCCCACACGAGAAGGTGTACTGGGGGCTCATCTAGAAACGGAAACTGTCCAGGCTCAAGCACTAACGTCATATCTGGCACGGGCGCGAGAATCTCATGGAAAACAGGGGAGTCAAATGAAAGAGTTGCCGTAATCATTGTTCCCGAGTAATCCTCCATCTACTATCTGCCTCCGTTTCCAGGGGTATAGTTCCACGGGTAGTCTTAGAAATAATATCAAATAGGTCGATTGTATTCCATATGGGGACTACCTCTGTTTGACGAGGCGGTAGAACTCGTCGTGGCCGTTCTACGATCGACTTACTCTACACTGATGCGAGTGTCCCACCGGG # Right flank : GGCGTGCGAGCACATGCTCCCTCTTTCGCGCTCGTTCCATCAGCTAGAAAGCCCGAGACGGAATTGAAACTCGCACGATGCCGTGATGGATCATCTGTAGGTCGTGTTGCAGCAGCTAAAAAACTACAGGTGAATTCGGGCTCAAGAAGTTCACGGTTATAGATCATACACTATCTTTTTCCCGCGGATCAGAAACGAATGCGAATAACCGCGTAGGGGAATGAATAAGGCGAACGTGTTCATGCGCTTCAAGCACTTCTAAACGGTTGTAGACGCTATTTCTCGAAAATCCAGTCTCATCGACAAGATACCCTTTTGTCGCAAGTCCCCATGGCTCATCACCATCCCGACCGCGTTTGAGTACATCGAGTATTGCCCTATCCGTCCGGGTCAGATCGGACGCATCCATATGCTCTACTCCAAGGGCCATACGCCTAATAACATTGCCTACGCAAAAAGAATTGGCACATCGAGGCCTCGTTTTGAATGTGCATTATGCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGACGTACCCTCGTGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //