Array 1 1768931-1768105 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036347.1 Gimesia chilikensis strain V6 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1768930 36 86.1 30 T.............CAA..C................ AGCGTCTGCTCAACCTGCTCACCTGTGATA 1768864 36 100.0 30 .................................... TGGTGGAGGAGACGCAACCGAAGCCAAGCA 1768798 36 100.0 30 .................................... TCAGCTGATGCAGACCGGCACTGTAGCCCA 1768732 36 100.0 29 .................................... TCTGTGAAGTCCAGGTTCCCATCTCCCCC 1768667 36 100.0 30 .................................... CTGGGAGCGGACACACTGGCCGACTGTGGA 1768601 36 100.0 30 .................................... CCTGCGTCTGGAATCACAGCTGGACCCGAT 1768535 36 100.0 30 .................................... CACTGCTTCTTCGGGAACCCAGAACCACGA 1768469 36 100.0 30 .................................... TAGCGAGCTAGGAGCCTTAGCTGACGAAGG 1768403 36 100.0 29 .................................... CCGTCGAGGTTGTAAATCACGTAGTCGTC 1768338 36 100.0 30 .................................... ATCGTGGTCGTTCAGGTCGAAGATATCCGA 1768272 36 100.0 30 .................................... TTCGTCGGTGGTCGCATCTTTACAGCCGTG 1768206 36 100.0 30 .................................... TCCTGGCAGGTAATCTAATAACCGAAGCTA 1768140 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 98.9 30 GTTGCGGATTGATTACGAGTAAGGATCGAATACACT # Left flank : GGTTGGTTTTCCCAGTCGACTGAAATCCAGAGTCACTTTGTTGAAGTAAGCCCACCAGTCCAGACTCTTCGAAATGAACTCAGGGCCGTCACAGAACTGAATCGAGCCAACATTCGGAAGTAAACAAGCCATTGATTCTCATATCCCTGTGATTGATAAAAGAAGAGAAAGCATAACCACCAACTTCCTAATAAAACCATTGCAGGTGGGACCAATTTCAATGCAAATCTCCAACAGTCTAACATTTTGTCCAGATACATTCGCAATTAAAGAGCAAATCACAACCAGTCCTACTATGATCGATGAGACCAAACACCAGAACTGAGCTGAAAGACTCAGTTAATGTATTGTCACCCAGTGATAAGGTACCCCACATGCTTCTGAACCATTATCCAGATTAAAGTCATAGGAACTCCGAAGAACTGAATCTGGATAACCATAAAAAATGCTCTTCTAACCTTTCGCACATAGTTGCAAGACAGAAATTATTGAGAATAGAC # Right flank : ATTTCCTGCTCAAATCGTTCACTGGAAAGGAGTTGCTGTCGGTTAGCGTCAGAAAAACTCAAGCTGGCGAGGTGGTTTGGTCGTTGGTTTGCGCATTTTCCCCCAGAAAATGCGCATCTTTTCGAACTGCCTGTCAGTGACGCTGAGGATGCGCACTTCGCCGTCGGGGGGAATATTCTGCTCAATTCTCCGGATATGGACATTGGCTTTTTCCTCGCTGGTACAGTGCCGACTGTAGATTGAGAACTGCATCATATCAAATCCGTCTTCCAGAAGCATCTTTCGGAAGCGGGAATATTGTTTGCGCGCTTTTTTTGTGTCAGTCGGCAGATCAAACATGACTACGATCCACATGCTTCGGTATCCGCTGAAATGCATGGTACGGGTATCTCCAGTTCTTTACGGCTTCCTTGAAAACAATGCACGAGCGACGCGGTCATCCTGTTGATTGCCACCATCAACGGTCCGCTCTGATCGCCGGTGCTGACGGTTTCGGTCAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGATTGATTACGAGTAAGGATCGAATACACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //