Array 1 124178-125950 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWNT020000005.1 Escherichia sp. 14.0982 MOD1-EC7096_5_length_208760_cov_82.9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 124178 28 100.0 33 ............................ ATCTGGAGGCGGTTACTCTGTCCGCGTCCACGA 124239 28 100.0 32 ............................ TCCGCGCTTGTTATAATCCACATCAAGATCGA 124299 28 100.0 32 ............................ AATAGGGCTGAGCAAAGCCTCCAAGCTGTCCA 124359 28 100.0 32 ............................ GAGGGAATACGGGGAAACGCGGTAACACCTGT 124419 28 100.0 33 ............................ GCAATGCGCGTCGCATGTGGCGGTGGTGGGCAG 124480 28 100.0 32 ............................ ACTTGTTCAGCTCACATAAAGCTGGCGAGCCG 124540 28 100.0 32 ............................ AGCATCCTGTGCCACTGACGCCATCGTTTCAG 124600 28 100.0 32 ............................ ACTCAGGGTGCCGCTGTGCAAAGCATAATAAA 124660 28 100.0 32 ............................ AGTTTCAGTAGCTCAGCCTCAATCCTCCCCGC 124720 28 100.0 32 ............................ TGTCGTTTCGTGAGAACGTCTACGACGTAGAA 124780 28 100.0 32 ............................ GCTAGCAGTGACAACGTAAACGCCGGGCAGGA 124840 28 100.0 32 ............................ GCAACGGCTTCGGGCAGGTCGTGCGCCTGTAC 124900 28 100.0 32 ............................ CCTCAATCGAAAACACGCCGTTACCGTGGTTT 124960 28 100.0 32 ............................ CGGATTTCTGCGCGAAGATTTTTAATTGCTGC 125020 28 100.0 32 ............................ AACAAACGGCGTTTCATAAACCCGCCCGGCGT 125080 28 100.0 32 ............................ AGCAACAAAAAACCTGATGACCGGATGACACA 125140 28 100.0 32 ............................ GCGCCACCCAGGTGGCCCGACACCGATTGAAT 125200 28 100.0 32 ............................ CACATATCTGATTAAATATCACGACACGGCGA 125260 28 100.0 33 ............................ ACTTCCATGTGGCGGTTTTGCCACATCCATAGT 125321 28 100.0 32 ............................ ATCATAAGCAGGTGTTACGCGTCTCCTACAAA 125381 28 100.0 32 ............................ CAGCGCAGCACCGGCACAAAAACGCATTGCGC 125441 28 100.0 32 ............................ ACTGCTGGCCCGACTGTAGACGGGCGGGAAAT 125501 28 100.0 32 ............................ ATTTCATTGATAAAGGAGTTATAGGCGACTTC 125561 28 100.0 32 ............................ GAAATGATGAGTCGAGGACGGCGACATCATCA 125621 28 100.0 32 ............................ ACGGGCGCGGCGGCAGAGTGTCCGATTAAATA 125681 28 100.0 32 ............................ AGTTCTCGACTGATGCAACTCATTGCCCCCTC 125741 28 100.0 33 ............................ GACAGCAAATCACCGCGTAACCAGATTTGACGA 125802 28 100.0 32 ............................ TGTACCAGCACTTGTCGCAGCGGGTGCTACGG 125862 28 100.0 32 ............................ GCACTTATGGCGAGTAACAAAGGTTGAAATGT 125922 28 92.9 0 ....................T...C... | C [125945] ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAGTTGCAGGTTCAACTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCACGTAACTGGCTGGCTGAGAAAGGTTACGACCGGGCAATGGGCGCACGTCCGATGGCTCGCGTCATCCAGGACAACCTGAAGAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGATGGCGGTCAGGTCACTGTTGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCACAAAGCGGAAGCAGCGCATTAATCTGGGGTCGTGAAGCCTTTTAAGTAGGTTGATAAAGTCCGTAATCTCGTAAGAGGTTACGGATTTTTTTGTTTGTGAGGTGGGGCGGTAAAAACCCTATTTTTGAGGGCGAAGGTAAGTTATTGATAATTAATGCTGCTGGAAGGCAAGGATAAAAAAGGGGCTGGACAAGGAATTTTGCTGGTTTCGCTTTATTAACAATGGGCTAAGCGTGTAGTATTTGA # Right flank : ATACGATGATGGCAGAAATTTAGCTGCGTTATGGCGCTCTCAACTCCGAACCATTAGCTGTGACACACAATAACAATTGTGATAATTGCGACGAGAATCAATTTCTCACACAGAAATCAATGCTGTACTAATCCTAACTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCAAATTACCTTACTCCTTCTGATCTCAAAACCATTCTCCACTCCAGGCGTGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAGTATGTCACCAGTGAAGGCAAGGGGTCGTATTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGTTGGGGATGGGAACGTCCGTTACCCAGGCGGCGATGCGTGAATTTGCCCATGCTGGAGTGATGGTGGGTTTTTGTGGTACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 140208-140536 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWNT020000005.1 Escherichia sp. 14.0982 MOD1-EC7096_5_length_208760_cov_82.9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 140208 28 100.0 32 ............................ AGATCCAGATTTTTATCACGCGATTTCAGAGA 140268 28 100.0 32 ............................ AATAGGGCTGAGCAAAGCCTCCAAGCTGTCCA 140328 28 100.0 32 ............................ CAGCGCTGGCGGTGGATGATGCGGGGTAAGTT 140388 28 100.0 32 ............................ TGAACGGCACATTTTTGCGCCTCTGGTAGAAC 140448 28 100.0 33 ............................ TAAACAGCAACTACTTTAAGATTGAAATATTAC 140509 28 89.3 0 ....................T..TT... | ========== ====== ====== ====== ============================ ================================= ================== 6 28 98.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGTGTTTTTTATTTAAGGCGCATTAATGCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTTTTGCTGCCTTACTACATGGGGGCAACGGGGCGCTACTATAGGGAGTTGGAGCAAAACGGTCAAGAAGAATTTATTTAGATTGATTTGTTTGGTTACGCAATGAACACACGATTCATTCGCCCGAGATTATGGTCGTATGCGTTCTGATCAATTGTTTATCAAAAGCTACGAGGGAAATATGAGAGTGAAGAAATACCAATCGACCCATTTTTTTAGAGTGACATGTAACTCATTGATTTTGTTTATTACTATTTTGACGTCTCGAAAAAGGGTATGAACCTATGATTTTGTGATTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTTCA # Right flank : AATCCACACCCCAATATTTATTTTCTTCCTTAATCCCGGGCGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCGTCAGGCGGCAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTGTTAGGTAACGTTTCAAGAACAGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTTGGCACATAACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAACGGTGAGATAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //