Array 1 367591-372341 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065435.1 Halomonas sp. SS10-MC5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 367591 28 100.0 32 ............................ ACCCTGGCCAAGGGCCACCGCCACAAGGTCGC 367651 28 100.0 32 ............................ TCATCGACGGCGCCGATCCTGCTGGTCGGCGA 367711 28 100.0 32 ............................ TTCAGCAGGAGTCGGGCCGCGTGCCGCAGGCC 367771 28 100.0 32 ............................ GCACAGCAGGCGGCGCGCAGCTCGGCGAGGAT 367831 28 100.0 32 ............................ AGTAGAGATGGGCGCCCCGCCGCTTGCTCTGG 367891 28 100.0 32 ............................ CGGCCAATCCCGACCGCCGTCAGCTCGTCATG 367951 28 100.0 32 ............................ CAGCGGCGCGGGGTCCGACTGGATGGCATGGG 368011 28 100.0 32 ............................ AGGATTCGGGATATTGAAGGGAATGACTACCG 368071 28 100.0 32 ............................ ACGCCGCACCGTGTAGCCGCTGCCGTCGACAG 368131 28 100.0 32 ............................ ATTGCAGCATATAGCGGATTTTCGACGGCATA 368191 28 100.0 32 ............................ TGCTGCGCCAGGCCTTCGCCGACGCCGGCGAC 368251 28 100.0 32 ............................ TTGCCGATGATTCGCGCGACCAGGTCATCCTT 368311 28 100.0 32 ............................ TGGCCCTCGCTATAGGCGACCTCGTAAAGCTC 368371 28 100.0 32 ............................ ATAGAAACGGCGGGCGCACGCGGGCGCCGCAC 368431 28 100.0 32 ............................ GTCTCGGGCATCCTGGAGGTTGATCGACTCGC 368491 28 100.0 32 ............................ ATGAGCATCGATGAGGTGAACGCCATCCGTGA 368551 28 100.0 32 ............................ TCCCGGTCGGGACTGCTACAATGGACCCTGTG 368611 28 100.0 32 ............................ TCCACGGGCACGGACGACAATGAGCAAAGCGA 368671 28 100.0 32 ............................ CTCACCTGGAACAGGCAAGGCCAAAACGGAAG 368731 28 100.0 32 ............................ TGATTGAAGAGCGAGTCGAGGCGTTTTACGCC 368791 28 100.0 32 ............................ TTGACCAGGTTGTCGGCGTTCATCGCCACGAT 368851 28 100.0 32 ............................ ACAGGCCAGGTTACGGCAGAGATCCACCCGAG 368911 28 100.0 32 ............................ TGAGTGCCCGCCATAGCATGTCTGCCACGTCA 368971 28 100.0 32 ............................ GACACGACGTAAACGCTTTCTCGGTCATGGTA 369031 28 100.0 32 ............................ AACGGCGCCGCGAGTATATCGAAAATGAAGGG 369091 28 100.0 32 ............................ ATAAGTTGACGAGGATACGCAGCGGGAGGCCA 369151 28 100.0 32 ............................ AGGGTGCGCGCCCGCTTGTCGAGCTGCCCGAC 369211 28 96.4 32 ...........A................ CCTTGGATTCCTCGCCGAACAGTTGCGAGATC 369271 28 100.0 32 ............................ ACAAGGGGCGCGAGGAAGGCCGCACGCTGGAT 369331 28 100.0 32 ............................ ACCGGGGCCGCTCAAGACGCCACGCGCAATCA 369391 28 100.0 32 ............................ TCAAGACCGGCGCGCTGGCGATGCGCTTCGCC 369451 28 100.0 32 ............................ TTCCGCGATCCAGCCGAACCCGGCGCCGCTGA 369511 28 100.0 32 ............................ GTCACCCGCGAGTGCGAGGGAGTGGCCCACTG 369571 28 100.0 32 ............................ GGCTTGAGCAAGCGCAGTCCTTGCAGCTATCC 369631 28 100.0 32 ............................ TCATTGACCCGGCGACAGGATGCGAGGTGTCC 369691 28 100.0 32 ............................ CGAGAGCGCTCGCACCGTGACGATCACCGAGG 369751 28 100.0 32 ............................ CTGAGCACGGGCTGGAAAAAACGCGATATCGC 369811 28 100.0 32 ............................ AGAACCGGGCTTCATCAACATCAACTGATAGG 369871 28 100.0 32 ............................ AAAGTGACGGAACCTTGAGGCCAAGCTCGTTC 369931 28 100.0 32 ............................ ATATCAGCGTCCGTGGCGCCACCGCCCGCATC 369991 28 100.0 32 ............................ TATGGCGTTGCCGGTTTCCGTGGCTTCCTCGG 370051 28 100.0 32 ............................ CTGCCCATCCTGCTGCTTGAACAGGTCGGCCA 370111 28 100.0 32 ............................ TGTACCAGCCCGTAGCGAGCACCCATCGAGGG 370171 28 100.0 32 ............................ TGATAGCCAGCGCCCTAGCGGTCACTTTAGGC 370231 28 100.0 32 ............................ GCCCGGCACAAAGTTGGTGACGGCCTCGATTT 370291 28 100.0 32 ............................ ATGGGACGTGGTGCTGTTCCGCGTCGACGGCA 370351 28 100.0 32 ............................ TCGCACCACAACCGCTTCTTCGAGAAGTTCCA 370411 28 100.0 32 ............................ AACAAGAACTGGAGTGTCAGCAAGGGGCAGTA 370471 28 100.0 32 ............................ TGATGCTAAAGCATGATTGGTGTCACAATCGT 370531 28 100.0 32 ............................ TAACATGGCTGCCGCCCAGGGCCTGTTCGACC 370591 28 100.0 32 ............................ TCCTACATCCCCACGGCTGGCAGCCCCGTTAC 370651 28 100.0 32 ............................ GCCAACCCGATCCAGAAGTGGCGGACTATCAC 370711 28 100.0 32 ............................ ATGTCGCCGGAGTAGCGCTTGGCGACGGCAGT 370771 28 100.0 32 ............................ TACGCTCGGCGTCGAGACGATGTGGTTCCACG 370831 28 100.0 32 ............................ ATGAAGCCCAACGTTGCCGACAAGGATAGCGG 370891 28 100.0 32 ............................ AAGCCGCCGTCCCACCTCATGTAACCATTTGA 370951 28 100.0 32 ............................ GCCGAGCGGCTTGGTGATGTTGGTCCGCACGA 371011 28 100.0 32 ............................ TCCCGCGCCTTGGCCAAGGCGTCTTCCACTGG 371071 28 100.0 32 ............................ TGCAAGAGGCGCCCGATGGGCAACCAAAGCCA 371131 28 100.0 32 ............................ AGTCCCAGCGGAAACGCTTAGGCGATAGACCG 371191 28 100.0 32 ............................ CCCGCCAATAACGGGGGCGCATGACGTAGGCC 371251 28 100.0 32 ............................ ACCTGACCCACTACGCGACTGTGGCTTACGGT 371311 28 100.0 32 ............................ AAAGGCGAGCTAGCAGAAGCCCTCTATCCTAG 371371 28 100.0 32 ............................ TTCTGGATCAGCTCGTTCTCGGCCTTGGTGCG 371431 28 100.0 32 ............................ AAGACACATCGCGGCATGGCCGGCCAGTTTGA 371491 28 100.0 32 ............................ AGATGGGAGAAAGCGGACCTCGGGGTCCGCGC 371551 28 100.0 32 ............................ AGTAGCGGTTATGGTTGTCCTCGACGTGCTTC 371611 28 100.0 32 ............................ GTATGCGAATTGAACGATGGTGTGCGCCGGGG 371671 28 100.0 32 ............................ AGACCAGGCGCCAGATGCAGGACATGGCCAAA 371731 28 100.0 32 ............................ ATGACCATGACCCCGCCTGAGCGGTTCGGGGT 371791 28 96.4 32 ...............G............ ATGAGGATGCACAAGCGTAGAGACGACCCGCT 371851 28 100.0 32 ............................ TGCGCTCCGTGTCCGACCCAGCAGACGTGTCC 371911 28 100.0 16 ............................ CGCCAGGGGCCCGACC Deletion [371955] 371955 28 100.0 32 ............................ TGGCTGTATAAGACCGGCGAGCAGCTGCTGGC 372015 28 100.0 32 ............................ TGGCTGTATGAGACCGGCGAGCAGCTGCTGGC 372075 28 96.4 32 ..........A................. TTATAGCTGTATGGGCACACACGGCCAACCGG 372135 28 96.4 32 ...............G............ CACTGGCTAGTCATGACCATGTCCGCTCTCCT 372195 28 100.0 32 ............................ ATGCGGCCGATGTACTCGACGTCGACCGGCAC 372255 28 89.3 32 .............T.G...........T TACTCCATCGACGAAATGTTCGTGCGTTTCGG 372315 27 89.3 0 ...............G......-.A... | ========== ====== ====== ====== ============================ ================================ ================== 80 28 99.6 32 GTGAGCTGCCGCACACGCAGCTCAGAAA # Left flank : CGCGACTAGAGCAATTGATGGCGATCCCGTGGCTCACTGGCATGCGCGACCACGTCACGCTGGCATCCATTCAACCTGTGCCTGCCGATGCAAAGCACCGAGTGGTGCGGCGCCGACAGTTCAACACCGGTGGCCCCAGCCGAGCCAGGCGGTATGCACAACGGCATGGCATCGAGTTCGAAGAAGCGCAGCGCTTGATGGAGGCACCTGCCGCCCGGCAGATCGCCCTGCCTTTCGTGCAGGTCAGCAGCCGCTCAAGTGGACAGCGGTTTGCGCTATTCATCGAGCATGGCCTGCCGCAGGCTCAGCCTGTCGCGGGGCGTTTCAATCACTACGGATTGAGTAGCGAGGCGACAGTGCCCTGGTTCGGACCCTTTTCTAGGGAGAATTATTAGCTTTAGAAAAATCAACTTGTTAGAAACGCCTCTCTGAAAAGGGAGGCGTTGCTCTTTGGAAGCATTGCTCTTTAACAATCAATCGCTTAACTTGAAACTGTTCTA # Right flank : ACCGTATGGTGGCGAAACCTCTCTGGCGAGCCGTCCCCTATCCCCCAAACTCCTCCGTATCGATCTCTGCCTGCAGCGCTTCGCTGTAGCGGGCGCCGGCCACCTGGTCCGGTGTCAGCAGTGCGTTCAACCGCGCGATGGTGTCGGCATCCAGGCGCAGGTCTTCCGCGGCGAGGTTTTCGCGCATATGCGCGATTGAGCGGGTGCCGGGGATGGGAATCACGTCGTCGCCTTGGGCCTTGAGCCAGGCGAGGGCGAGTTGGCCGGTGGTAACTCCCCGCTCGCGGGCGATGGCCTGGAGCTTTTCCAGCTGACGCAGGTTTTGCGGCAGGTTCTCGGCGCTGAAGCGCGGCATGCCGCGGCGCACGTCGTTCTCGGTGAGCTGGGTGGCGTCGGTCACGGCGCCGGCCAGGAAGCCGCGCCCCAGCGGGCTAAAGGCGACCAGCGCGGTGTCGGCTTCTCGGCAGGCGTCGAGCAGGGCGATCTCGGGGTTGCGGGTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCTGCCGCACACGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //