Array 1 9155-7930 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVFK01000078.1 Absiella sp. AM54-8XD AM54-8XD.Scaf78, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 9154 33 100.0 34 ................................. AAGATTAAGTATATGGGTATGCACCAGGAGAGAG 9087 33 100.0 33 ................................. TCATCTGTAAGATATCTTATAAAGCTGTCTTGC 9021 33 97.0 34 ................................C CAATTTGATGTGCTATTGCGCAACTTTAAAGAAC 8954 33 97.0 34 ................................T CAAAAATCAATAGATCTCCATCGTTTATATTTGC 8887 33 100.0 32 ................................. CATCAAATTTTAGATTTATGGAACTTTTAGCA 8822 33 97.0 33 ................................T TAGATGTAAATGATGTACATAATTTGTTGATTG 8756 33 97.0 33 ................................G CGGAGCAACTTAACAAAATGTTTGTTGTTTCCG 8690 33 100.0 32 ................................. GCCTGTTCATTTCGCACCTCTTTTCTGTCGCC 8625 33 97.0 33 ................................T CGCATAAGCGCTTATCAAAACTACCCGCCTACC 8559 33 97.0 34 ................................T AAATGCGTCCATATAATCGTTAAATTTTTTCTTT 8492 33 100.0 34 ................................. TCGATCCCACACGCATCATAAGCAGTTTCTATAG 8425 33 97.0 34 ................................T TTGTTTTACCAATCTTTTGATATACGCTGTCTGC 8358 33 97.0 36 ................................C CCTCACTTTCGTTTTCAAATTGATCAAAAACACCGT 8289 33 100.0 32 ................................. CTTTATCGTTACCGACAAATTTACGTCCTGGT 8224 33 97.0 33 ................................G TAGCTATCTGATTTTGATGCTACGAGATCTGTT 8158 33 93.9 32 ........................G.......G TGCAATGTATTTTAGCTATATGTATCGTATGG 8093 33 100.0 33 ................................. TTGAAGATCTACGTGATACGATGGTTGATATGA 8027 33 90.9 34 ..........G.........A...........G ATGCAGATGTCAAAGTAACGATCCATGCAAACAG 7960 31 81.8 0 ..................A.A.--.....G.C. | ========== ====== ====== ====== ================================= ==================================== ================== 19 33 96.8 33 GTCTAGCTCTATATGAGCTAGTGGATTTAAATA # Left flank : ATACGCGGTGATTTGGATGAGTATCCACCTTTTTTAGCAAGGTGATTTTATATGCTGGTATTGATAACATACGATGTTAATACAGAAACGAAAGCTGGGAAAACCAGATTAAGAAAAGTAGCAAAAGAATGTATGAATTATGGGCATAGAGTGCAAAATTCTGTTTTTGAATGTTATATGGATAATGCAAAAGCACTTGAAGTTAAACATATTCTGGAAAAGATTATTGATAAGGATCATGATAGTTTAAGATTTTATTATTTAGGTAATCGATATGAAAATAAGGTTGAACATATTGGTGTAAAACCTAGTTTTAAATTAGATGATGTATTGATCTTATAGTAACGCGAATATGATGCTCCCATGAAATCGCTGGGAGGTTCGCGCAAAAATGTGTTATATTTTGAATAATATGTAACATATTGAAAATAGTAATGTTAATTTAAAAAAATATTGTTTGAAAATTCGTTACATTAGTTTGAATTCGATACATTTTTGTT # Right flank : TCTAACAACGCCCGCTTATTTTGGCGATATGCTCGACTTTTTTCAGAACACCAATTTAAACACTGTACAAACTAATGAATTTATATCACATTTTTATAAACAATTTTATAAACGGCAGATAATACAAAATACTATGTCTAATGTCTTTATAATTGTGTATAATATATTCGTTTGATTATGAGGTGAAAATAAATATGTACAAACAATATAGAGAAGGCTGGCTAGAAGTAATATCTGGATGCATGTTCGCAGGAAAAACTGAAGAATTAATTCGTCGTATTAAAGTATTAGAGTATGCAAAAAAGAAAATAGCTGTCTTTAAACCAAAAATAGATAATCGATACAGTGAAGAAAATATTGTATCGCATGCAGGAAGTAGTGTGAAAAGCTTTTCGATTGAAAATGCACATGAAATATTCAATTATATTGATGATTCATATGACGTTATCGCGATAGATGAAGTACAATTTTTTGATGAAGAGATTGTTGAAATTTGTGAC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTATATGAGCTAGTGGATTTAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTATAGAGCTAGTGGATTTAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 15-485 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVFK01000002.1 Absiella sp. AM54-8XD AM54-8XD.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 15 32 100.0 14 ................................ ATTTTTGCTGAAAT Deletion [61] 61 32 100.0 34 ................................ ATTTTTGCTGTATAATATAAGTGAAGTGAGGTGA 127 32 100.0 34 ................................ AGGTCAAGGGATTTATGAGAGGAAAAGGCAATAT 193 32 100.0 34 ................................ ATTGTCTAACATTTATGAGAGGAAAAGGCAATAT 259 32 100.0 33 ................................ ATTGTCTAACATCTTACCAACGTCTGCTCCGTT 324 32 100.0 33 ................................ TTTCAATACTAAAATTTCGGGTATTTCCATCAA 389 32 100.0 33 ................................ GGAGATAGTAAGGAAGTTGCACAGGCATTAGAA 454 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 8 32 100.0 31 ATTGAAATCCACAAGTTCATGAGAAACTTGAC # Left flank : GTGTAATATGAAATA # Right flank : CCGCAAAAATATTATTTACTTGCTAACTTGTAACAAATTTCCATCAAATGAAATCTCTCTTTCTTTCAATCTGTTACATATCACTGATTAAGACACACAATTTAGCGCGAATCTCCTAGAGAAAACATGGGAGCTTAATATTCGCAAATCTTAAAATCTTGTTTTCCTATGATAATTATCATCGAACATGATAAATATCTGAAATAACTCTTCTGCTGAAAATTCAATTTTCCCTTGATATTTTTCAACAATCTGTTCAATATTTCGGAAACCAAAACCGTGCATATGATGATCCTTTTTATTACTAATTAAACGATCATCCTTTATAATCACTTCATCTTTATCATAAGAATTTGATAAATCAATATAAATAAAATCATCTTTATGTCCAATACTTAAACGGATTAATTTACGCTCACATTTACAAACCGCCTCTAAACTATTATCCAACAAATTTCCAAGCAAAATACATAAATCCATATCATCTAAAATTGCCAGCG # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAATCCACAAGTTCATGAGAAACTTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [18.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 1 9069-10568 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVFK01000013.1 Absiella sp. AM54-8XD AM54-8XD.Scaf13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 9069 33 100.0 32 ................................. ATTTGATCGATGAAATATCCACTAGTATTTAA 9134 33 97.0 34 ................................C ATCCTCATTGTACTTGTCATACTCATCATTAATC 9201 33 100.0 34 ................................. TCAAATGTTACTACTTCTCTTCCGCTCTCTTTAT 9268 33 100.0 32 ................................. CAGCAGAGTACGAAAGAGGAGTACATGTAAAG 9333 33 100.0 32 ................................. ACATCTGCATGAATTCCTTTTGATTTTACATA 9398 33 100.0 34 ................................. AGGTGGTATCGTTGAGGCTATCGGTACTGTGATT 9465 33 97.0 35 ................................A TTTTAATCTTTGTTTCATCCTGGTGCTTTTAGCTC 9533 33 97.0 33 ................................G AGTTGATTATATGAAATTTAAACCATTGAATAT 9599 33 97.0 34 ................................A TTATGCTCAAAGTCATGTGATCGAAGAAACAGAA 9666 33 97.0 33 ................................G TCGTAGTAGTACAAGAACTTTGGCACATTGGTT 9732 33 100.0 35 ................................. GTTAGATGGTCATATGGCACTGGCACGCCTTCTAT 9800 33 97.0 32 ................................A GCACTGACTCTTTCCATAGCATCGATCGTACG 9865 33 100.0 34 ................................. CTGGTGCATGCTCTGGCAGGTTCCTCGTTCTTTG 9932 33 97.0 35 ................................C GTAAAATGTATTTATCTTAGTGGACAATGCCAGTG 10000 33 100.0 33 ................................. TTAAGAAAGTGATTCCGTCAGATATCGCTAAAA 10066 33 100.0 34 ................................. CGAAAAAAGTCATATGCCGAACGTCAATTGTCGA 10133 33 100.0 34 ................................. AGCAAAACATTTGATTATCCTAGTTTGCCTTTAT 10200 33 97.0 34 ................................A GTCATGGATAAAAGTCCTCAATGACGATCCTCAA 10267 33 100.0 35 ................................. CAAGAACTTGCTGATCAATTAGTCAAAGATGGTTG 10335 33 97.0 34 ................................A CTTTATGTTCTCCGATTGCATCATTGTTATAGCC 10402 33 97.0 34 ................................A CTGTAACCGGCACGAATGGCTGCCTGTGTGATGT 10469 33 100.0 34 ................................. TCCTTTCTGTGCAAATCACATTTATACCTCTACC 10536 33 84.8 0 ..........T........C..AT........G | ========== ====== ====== ====== ================================= =================================== ================== 23 33 98.0 34 GTCTAGCTCTATATGAGCTAGTGGATTTAAATT # Left flank : GATACGTGGTGATTTGGATGAGTATCCTTCCTTCTTAGCGAGGTGATTTTATATGCCGGTATTGATAACATACGATGTTAATACAGAAACGAAAGCTGGGAAAACGAGACTAAGAAAGTAGCAAAAGAATTTATGAATTATTAGCATAGATTGCGAAATTCTGTTTTTAAATGTTTTATGGGTAACGTAAAAGCACTTGAAGTTAAACATATTCTGGAAAAGATTATTGATAAGGATTATGACAGTTTAAGATTTTATTATTTAGGTAATCAATATGAAAATAAGGTTGAACATATTGGTGTAAAACCTAGTTTTAAATTAGATGATGTATTGATCTTATAGTAACGCGAATATGAAGCTCCCATGAAATCGCTGGGAGGTTCGCGCAAAAATGTGTTATATTTTGGATGATATGTAACATATTGAAAATAGCGATGTTAATTTTAAAAAATATTGTTTGAAAATTCGTTACATTGGTTTGAATTTAATACATTCTTGCT # Right flank : GTACATTATGTGCTGCCTTTTAAAATTCTGTGCGTTTAGATTGATAAGAGTATTACAGTCTTTATCTAATATTTCTGTGAAAAGCAACTCCACTTGACATACTTATGATCTCATCTTCAGAAGAGGCTTTGTAATATATCATTTCTTTGAACGCTTATTGAAAAAAGTACTACTCTATTATAAATTATAAAATTGAGGCATCCTTGTGTATTATAGTTATATCACGCTTGCGTAATATGTTAGGTTTTAAAGCACATGATACTTCATACCAGCTGTAATCCATTCTTTTAAGATAATTAGATTGCTACTAAATTCAATATAAGTGTAAGCATATACCTTTGCATATTCTTTACAATTCATAAAATAACCATATCGCTCGTGAATATATAATAAAGGATTTCTAAGAAGTACTACTCACGCCGACAATAGTTGTCTTAAGCTGTATGGTCACTGTTCCAAGGGAAGGGATCGCCAATATTGTATAAATTAATGTATTACCT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTATATGAGCTAGTGGATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTATAGAGCTAGTGGATTTAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 70280-70792 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVFK01000013.1 Absiella sp. AM54-8XD AM54-8XD.Scaf13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 70280 34 100.0 35 .................................. GAAAACCTCTGCTGACGGAGGAGATGGTGTCCCCG 70349 34 100.0 34 .................................. TGATAGTAGGTGGAAATTATGGTAGCACGGTAGA 70417 34 100.0 35 .................................. ATTTTGACCAATAATGCTAAAACGCCACCAAGTAA 70486 34 100.0 33 .................................. ACACTATGACGGAGACGGCCATAAAAGCCGCCT 70553 34 100.0 35 .................................. AAGAAAGTAAAAATGTCGCTCCCATCCGACCAAGG 70622 34 100.0 36 .................................. TTTTTTAGGTACGATACACACTTGTATATAGTCATG 70692 34 100.0 33 .................................. TTCGAATACGTTTCCCCATTGATTACTATTTAA 70759 34 97.1 0 .................................G | ========== ====== ====== ====== ================================== ==================================== ================== 8 34 99.6 35 GTCATTATGCTATATGCATGATGTGGATTTAAAC # Left flank : AATATAAATATAGTATAGGAACTTATTTTTCATTGCTGGCATATGCAGATGAACCAATTCAGCATGCGTGGTTTCTATCACCAATTGTGAATATGCAGGTTATTGTAGAAAATATGATGGAATAGTTTCATATAGATGAAACACAATTAGAAAACAAGAGATAAACCAATTTAGATATGGTCTATTCGGATATCCTTTATGGAGAAAAGAATGATATGTGTGATTGGTTGTTCACAAATTTCATTGTGATTTACAAGTCATGAAGAATGGAGAGCATTATTTCCAAACATCTCAACAGCTTGCATATCATACTAAATGCTTAAACAATCATCTTATTTAAACGCTTGCGAACCTTAAGCTCACATGATATTCCTAGGACATTCGCGCATGGAGATATCTTATTTTGCACTATATGTATCGAAATGAAAAAAAGATTTAAAATCATGCGTTGAAAAGCAAAAAAAATTGTTTCATTAGCGTATGATTCTAACAATTTTGCG # Right flank : CATGATGTGGATTTAAACAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATTATGCTATATGCATGATGTGGATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 13-458 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVFK01000095.1 Absiella sp. AM54-8XD AM54-8XD.Scaf95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================== ================== 13 34 85.3 34 ..G....AA.A........G.............. AAGTATGGCAAAGAGGTGTTTCAATTGCTGTTAA G,T,G [15,18,27] 84 34 97.1 35 ...................G.............. TATGATAGACCAACCAAATAATCCAAACTGCCAGC 153 34 97.1 34 ...................G.............. GATAAGATTAAGATTTTTTTTATACATCTTAAAG 221 34 100.0 35 .................................. TTTACTTCTAATTGCTTTTGGTTTACAGTTACTTT 290 34 100.0 33 .................................. TGTTATTCCTGATTTTTTAATAAGATAAAAAGA 357 34 100.0 34 .................................. CTATTTTAAAAATACCATCTATATATATTGTTTC 425 34 85.3 0 .................G.......A..C...CG | ========== ====== ====== ====== ================================== =================================== ================== 7 34 95.0 34 GTCATTATGCTATATGCATAATGTGGATTTAAAC # Left flank : TATATGCATGATG # Right flank : GATTAGCACCGGTGCTAATGAACCATTTGCAACTGTTGTTATACTTTATACGGCAATGATTGAAGCATTGTATCGTTGTAAATGTCTTGAATTTAAACTAAAAAAGATATCACATCCGATTTGGATATGATATCTTCAAAATGTTTAAGCTTTACTATCTGCCAGAACGGTTTTAGTTTCTGGCTTTTCTTCTTCATTGAATAACTTTTTACCTGAACAGAAGGTAATCATTAAGCCTAATGCCACAAGTAGAACAGCGAAGATTAATTGTAAACCATCTGTCATAAATACGAAACCACCATTAACAAATAATTTCAAACAGATATTGTAGATAGATAAACCAAGTGATGTCATAGTACAAATTAACATCAGGGTCATAGGTACATATAACATCCATCCTTTTCTTCCAGTGACTTTTAAGAATACAGATAATGATACAAGAACCATAGCGCCTAATAACTGGTTAGCACTACCGAATAATGGCCAGATATTATTATATC # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATTATGCTATATGCATAATGTGGATTTAAAC # Alternate repeat : GTCATTATGCTATATGCATGATGTGGATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.59%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //