Array 1 15233-14733 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIJF01000060.1 Geobacillus sp. WSUCF-018B scaffold_59, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 15232 30 100.0 37 .............................. AACCATCAATAATAATTTTTTCAAAAACATCATAATC 15165 30 100.0 37 .............................. TCTTTCAAAAACAGCAACTTCTTCGCCGTTATGCCCA 15098 30 100.0 38 .............................. AACTTTTCTGCTCAAACTGTAGAACTCAAAAGAATTGC 15030 30 100.0 40 .............................. AAGAGTGTGAATTTACGTGAGATCGGCAAAAACATCATTC 14960 30 100.0 38 .............................. AGATACACACCGTCAGGAATAGCGGCAGCCACATTTAC 14892 30 100.0 36 .............................. TCGGCGAGGTGGACAAGCTGTCGCTGTCCCGTGTCG 14826 30 100.0 35 .............................. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 14761 29 73.3 0 ......G...CG.....A..A.GC-..... | ========== ====== ====== ====== ============================== ======================================== ================== 8 30 96.7 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GAAACGTTCGACGGAAGAAAGAAAACGCAATTTTTTGACCCCGATGATGAGGTGTTCCCCCACCTGATTGAATTGAATTTCCGTCATAAATATGAAGCGTACTACGGCGTTCCGCCGACGGAAAGACTGTTGATCGAGCCGATTCACGTTCATCATCGTCATCGTGTGGTGACAATGTTCAAGAATATGTATATTACAGGGTGGCTTGGCTATTACCGCCTCTGTTCTTCACCAGAACAGCTGACATTTTTATATCATGTCGGCCTAGGCAGCCGAAATTCACAAGGATTCGGCATGTTTCGCCTTAAAAGCGAATAAACGGGTCAAGAGATTGTCGTCGACCTCCAATCATGCAAAAAACCCGGGGGATCGACGACAATGGTTTTTGACGCTCCAAGCCTACAGCCATCACGATTGAAAGTCATTGACAGAATTTTTGAAACGTGCTATGCTGAAAATAGCTCCAAACCGAAAAGCTTGATGGAACAAGCCTTTTTGGG # Right flank : CCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACGGGGGTGGGATGGATGCGCCGCAAGCTTCGCGATCTCGGTTTTTCCATCGGCACGCTTCCGGTGGGGAGACGCAATCAAATCACGGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGTGAAGAGCGGGATGAACG # Questionable array : NO Score: 9.10 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 135-1245 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIJF01000067.1 Geobacillus sp. WSUCF-018B scaffold_66, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 135 36 100.0 30 .................................... TTAAATTCGCGGGCAAAAAGTAACATTAGA 201 36 100.0 30 .................................... CGGTATTGTCGCGGTTCCTGCTGGGGTACC 267 36 100.0 30 .................................... TACATAGTCAATCGCTTGTTTAAGCGCCTG 333 36 100.0 30 .................................... TTCTCCATAAAGCTCGATTCCTACAGGAAG 399 36 100.0 30 .................................... TCGCTGAAAGAACTTGGAAAAGTCGCTTGA 465 36 100.0 30 .................................... GGATATTTTCTTATGATGTCATCATCAGCG 531 36 100.0 29 .................................... TGCCGTTGCTTTGGTGATTGCGTATTTTG 596 36 100.0 30 .................................... TTGTCCAATACTTGAGCTTGATGAGTTTCC 662 36 100.0 30 .................................... TATCCCAATCTATCCTAGACACTTCTGCGT 728 36 100.0 30 .................................... TCGGCAGCACACTTTTCGGCTCTGCCCCTG 794 36 100.0 29 .................................... TGGAGGGATGAGGGTATGATAATTGAAAA 859 36 100.0 30 .................................... CGTGCTATACTCGTTTGTTTCTCGACTTCT 925 36 91.7 3 .................................CGA AAT Deletion [964] 944 36 77.8 18 C.C.GGGG.T.T........................ TCGGGCATGACATTAGAA AC [953] Deletion [998] 1012 36 100.0 30 .................................... AAGAAGGCGGACAGTTGGCAATTAATTTTG 1078 36 100.0 30 .................................... TCGGGCATGACATTAGAAGAAATTTCTCGT 1144 36 100.0 30 .................................... ATTTGAATAACAAATTCCGCTTCCCTTGGA 1210 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 98.3 28 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : GCAAAATCCGAAATAATTCACAAAAATTTTGCACATTATTTCGGAATCCGTCTGAAATAATTTGAAAAAGGGGTTCCGAAATAATGTGCTAATTTACACTATGACCTGGGTGATCTCGGCAAGCAATGTCTCGGA # Right flank : CAAACGCATAAAACCATTGTCGTCGATCCCCCGGGGTTTTTGCACGATTGGAGGTCGACGACAATGTGGGGCTTGACGGCGAAGGGCCGTCTCACCCCTTCATCCTTTCAATCATCGTACCCTTTCGCCAGCATTCTCTTCACCACATCGAGCTTCCCTTCCTCGATCCCTTCTTGGCGTCCTTGCTTCATCCCTTGCTTTAACCCCTGTTCGATTCCTTGTTGGATTCCCTTTTCCATCCCCCGCTGTTCGTATGAGACGATGAGCTCCATCACACGCTTTGCTTCCTTCGTTTCCATTTGGCTCACCTCGTTTCGCAGTTTGACTTCCTCCTCTTCGGACAACCGCAAATACGTTTCAAAAAAACCGAACAACAGCCGCTGTTTCGCCTCATCGAGCTCAAGGCGGACGAGCATGCGCAAAAATTCCTTTTGGAGAAGGAGACCCGATCGCTCCGGGCTCCTTCTCTGGCTCGTGGATGGACTACCCGTTGATATCCT # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 7165-8319 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIJF01000082.1 Geobacillus sp. WSUCF-018B scaffold_81, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 7165 36 100.0 30 .................................... TAGCAAGCTTTGCCCGTGCGCTTGGCGATA 7231 36 100.0 29 .................................... ACGAACAGCAGGGAGACTTTTCCCTTGTT 7296 36 100.0 29 .................................... ACATTGTATGAACTCTGGATTGTCCTTTA 7361 36 100.0 30 .................................... AGCCCAAAATGCCCAGTTGGCATCGCATAA 7427 36 100.0 30 .................................... TGTTCTAATGTGCGTAAATTTTTGCCTTTC 7493 36 100.0 29 .................................... GGAATCGTATCGAGTGTCAGCTTCGCAAA 7558 36 100.0 30 .................................... TGATGATAGCGCATGAAAGTTATAACATTG 7624 36 100.0 30 .................................... CGTCTATGCGACTTATTGCGATCCGTCCCC 7690 36 100.0 30 .................................... TCCGATGTTGCGCGATCGCGCGGAAAAGGA 7756 36 100.0 30 .................................... GCTTTTGACGCGTACGAGTACAACGCTTTA 7822 36 100.0 30 .................................... AGTACGGCGCAAATCCAAGACGGCGCGATT 7888 36 100.0 30 .................................... TTCATGAAGACATACCGATGAAGGAGGTGA 7954 36 100.0 29 .................................... CTCAAAGCCCAGCGTATGCGTTCCTGGTG 8019 36 100.0 30 .................................... CGACGATATGAGTATTAAACTTGCCCGCTT 8085 36 100.0 31 .................................... CCCGTATGGCTGCGGGTATAAATACGCGCCG 8152 36 100.0 30 .................................... TAATAATGTATTCAAAAATCGGGCCGGATA 8218 36 100.0 30 .................................... CTTTCGGGCATGTCGCCCAATGCGGCGTAT 8284 36 94.4 0 ..................................TG | ========== ====== ====== ====== ==================================== =============================== ================== 18 36 99.7 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : GCTTCGTCACGGCAAGCCGAAGCCAAGACCCTTCGTTGTTGAAATTGCCGGAACTTCTCCCGTTGCAACTGCACGTGTATGAGTAAGTTTATGCGGTTGCTCGTCTTTTTCGATCTTCCCGTCGTGACCAACCGGGAGAAGCGCGAATACCGGCGATTTCGCACATTCCTGCTGAACGAAGGGTACGATATGTTGCAATTTTCGGTCTACAGCCGCGTCTGCCACGGACATGAAGCAACGGACAAACATTTGGCAAGATTAAAACGCAACTTGCCCCCTCGAGGATCGATTCGGGCGATGGTCGTAACGGAAAAGCAGTACGCAAAAATGCAGCTGCTTCTCGGGGAACCAACGGCGCAAGAAAAGAAAGTGACATCCACCCAGCTGACGCTTTTTTAAAAAAAAACAGAAATGGTTCCTCTTTTTGCATAAGCGCCTTTGCATTTTTTGAAAGCAAAAAAGCCTGCGATCCTTGAGATTGCAGGCTTTTTTGGATACGT # Right flank : TAAATTATCATTTTATTTCAGCACAAAACGCCCATTTTTTTGCACATTCTTTCAGAAAGCCCTCTCCCCTTTTCTGAAGGAATGTGCTAAATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 44589-44953 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIJF01000029.1 Geobacillus sp. WSUCF-018B scaffold_28, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 44589 30 100.0 37 .............................. TTCAATACGTCGTTTTGCAACGTTACGCGATCAATGA 44656 30 100.0 37 .............................. TCCCTTCAAACGAAAAAGTTTTTACATCTTGGCCAAA 44723 30 100.0 37 .............................. ATGTCGAACATAAATTATTTTGTCCCGGTTGGACAAA 44790 30 100.0 37 .............................. CTGCGGGTCTGATCGCTGGGCTGTCATTTGCTTTTGT 44857 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 44924 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 97.8 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGAACCCGGCGCTGTCCGACGACATCATCCGTGTCGCCCGCTCGCCGATCCGCAAACTTGGGCCGAACGACCGCCTCGTCGCGCCAGCCGTGCAATATTGCGCCTTATTCGGCAACGTCCCGCACGGCTTGGCTAAAGGAATCGCCGCCCTCCTGCGGTTCGATGACGACCGCGACGTGGAAGCCGCCGCCCTTCAACAAACAATCGCCCAACATGGAATCGAAGGCGCGCTTCGGCAATACGCGGGGCTTGAAAGTGGGCACCCGCTCGTGGCGGCGGTGAAGGACGAGTACGGAAGAATGGAGAAAAACAAAAACTGACCGTCTTGCAAATGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCGACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGTCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : CGCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATCGAACACGTTCAAAGAGGGGTGATCGAATGGCCATTGACCATGACCGATTGTTCAAAGAGCTGATTCAAACGTTCTTCGAAGAGTTTCTCCTTCTCTTTTTCCCCGACATCCACGAGCATATCGATTTCCGCCATTTGTCCTTTTTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGCGAAAAATACCGCGTCGATCTATTGGTCGAGACGAAGCTGAAAGGGGAAGACGGGCTGATCATTGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAGGAACCGTCCGTGTTCTCAATCGCGTTTCCCTTTGGCGACGTGCTGCAG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 53071-54087 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIJF01000029.1 Geobacillus sp. WSUCF-018B scaffold_28, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 53071 30 100.0 37 .............................. CTCTTTTCGATCGGGCCGCATGTTGGGCAGTAAAAGC 53138 30 100.0 37 .............................. TTCTTTTCAGCACTTGTTGGTGCTCCCGGATCGCGAT 53205 30 100.0 38 .............................. GAAATCTATACAACTAAGACATGCAACCGCGTAAAGGT 53273 30 100.0 37 .............................. TCGAAGTGAAAAACCCCGATCGGGGCGTTTCGGCGAT 53340 30 100.0 35 .............................. TTCCTCGAGGTACTCCTCCCTTGTCTTCGCCCCTT 53405 30 100.0 37 .............................. ACCTCCGTATCTCGTGTATATCCTTTCGTCGTACAGA 53472 30 100.0 37 .............................. CAAAAAGGCAAGCCATGCGGTGGCGAAGCGAGGTTAT 53539 30 100.0 38 .............................. TGAATTCAACATCCCGGAAATCATGATTGAAAACACGA 53607 30 100.0 36 .............................. CGCTAGACGCTTATTTTGACGCGGAGATTACATTAG 53673 30 100.0 36 .............................. CGCTAGACGCTTATTTTGACGCGGAGATTACATTAG 53739 30 100.0 21 .............................. GTTTGGACCCACTTTATTTTG Deletion [53790] 53790 30 100.0 37 .............................. ATAATTTTTTCTTGAATAGATGGTGCGACTGTTTCAA 53857 30 100.0 38 .............................. TATACATTGAGAACCGTTTCAAAATAGGCTTTAATTCC 53925 30 100.0 37 .............................. AAAGATATTGCAAATGAATTGAATATTGGGATATATG 53992 30 100.0 36 .............................. CCGTCCTAGCCAAGTTTCTTCACCTTCTTATTGATT 54058 30 86.7 0 .C..............C....A.C...... | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 99.2 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TTGGGAGCGCAAATCGCCTACGCTCGGTTTACTGCCTTGCCTCCGCTTGTGTATGTGAGTGTGTTCGGGCGCTTGATATTGTCGCCGCTGTTGGCTGCGTCTTTGATCTTTCTATTAGGAATGGATGGCGTGACGGCTCAGGCATTGCTCATTGCCAGTTCGTATCCATGTTCACGCAATACGGCGCTGTATGCGCTCGAGTATGACTGCCACCCCGATTACGCCGCCCAGGCGGTGTTGGTGTCGACCTTGTTGAGCGCCATTACCGTGACAGGCACAGTATATGCGGCCCGTCTGCTGTTTCCGATTGGCGGATGAAAACGGGGGCAAGTTGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTCTTTTCGCGTCAAAATCCTACAGCCAACACGGCTGAACAGTATTGACAGAATTTTTGAAACGTGTTATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTACGCACATGGTTTGG # Right flank : CTATTCCCCGCCTCAGCTGAACCACCGCTGAGTTCAGCTTGTTTTACCGCTCGACATAGGAAAAGGACAAATGCGAAATGGCACATGCCAAAAAAACGCGGGGGAAACAAGAAGGAATTTGGCCGCGAAGAGCGAATACAGTACGGTGAATCCGACAATTGCAGGGAGGGAAAACGTGGCGAAGAAGCGAATTGACCATGACCGGTTGTTCAAAGAGCTGCTGTCGACATTTTTTGAGGAGTTTTTGCTTCTTTTCTTTCCCGACGTGTACGAGTACATTGACGTTCACCATCTCTCTTTCCTCTCCGAGGAACTGTTCACCGATGTGACGGCCGGAGAGAAGCACCGCGTCGACTTGTTGGTCGAAACAAAGGTGAAAGGGGAAGACGGGCTCGTCATTGTCCATGTCGAGCATCAAAGCTACACCCAGCGGACCTTCCCCGAGCGAATGTTCCTCTACTTCAGCCGCTTGTTTCAAAAATACCGCCGCCGCATTCTCC # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 88182-86994 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIJF01000004.1 Geobacillus sp. WSUCF-018B scaffold_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 88181 37 100.0 36 ..................................... CTCTGCTACAAGTGTATAGCCGTCAACATATTTATT 88108 37 100.0 34 ..................................... CAAGATACTCGAGGAAGGGTATCTAGCGCGGTCG 88037 37 100.0 35 ..................................... TTTCCCAACTGGATCGCTAGCGGAGTATAAACAAG 87965 37 100.0 33 ..................................... TCGTCCGGGGTCGGGCAAGCTCCCTGCGTTCAC 87895 37 100.0 35 ..................................... AAGCCATGCTTAATGACATGTTAGCGTTACCTAGC 87823 37 100.0 36 ..................................... TGAACAATCCGGAGAAAATCCAGCATTATCGTGAGG 87750 37 100.0 35 ..................................... AAGGTGAATTTTCAGAACCCGGCCACATTTGTCTC 87678 37 100.0 39 ..................................... CCAATCCCGATGAGCGCCGTTGCCAGCTCGGACATGTCG 87602 37 100.0 35 ..................................... ACGGTTCTCACTTATCAAGTGAAAAAATACGCCGG 87530 37 100.0 33 ..................................... CTCTCGTTCTTGACGTAACCGGTCAGCAAAGGT 87460 37 100.0 34 ..................................... TTGTGGACGCCTGTAGAAGATTTCTTTCGTCTAT 87389 37 100.0 34 ..................................... TACAAACGCTGGTGGGTGTGGGTGCTCGCGGTCA 87318 37 100.0 35 ..................................... CTGGCGAATGTTTATCCATTAAACGATAAACCATC 87246 37 100.0 35 ..................................... ATAATCCACTGACGGCCGCATACGGCAATATGCAC 87174 37 100.0 35 ..................................... TAACTCACACATCTTTTTCAATTGCACAGCAGTCG 87102 37 100.0 35 ..................................... AGAAGAAAAGTGGACAAGCGGGAGGTGAAAGAACA 87030 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 17 37 100.0 35 GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Left flank : CGAGTTCTTTCCGCTACCTAGGGCATTTTCTATGACCGAAATGCCCTATTTGTGCTGGGCTTTTTTATACACTAGCACTGGGGTGAATAGTTACGAAAAGATTATTACGTTGATTATAATGATCCCATCATTTTGTAATGACAAAGATGACAAAATGCCGATGATATGTGCGGCAAGAAGAGAATGATGCGCGAACATAAAGCGATGCTGAAAAAGAAGGGGGATCGCGATGGGCGGAAAAGCTGGTTATAAAGCCGAAGAGGGAAAATGGATCTGTGATCATTATGACTTTGCCCCAAACAGAATGCGTAAGTTCGCGTTTTTATATCTTGAAATGCGCTCAACACAAGATATCTAAACGCGGGC # Right flank : AAATTTGGTCAGGCCAAGCAGGAATTTGCCGCTTGCTGTCGAATTCATGTTCACGAAAATTGTTGCTTCACCTTTTCCATATCTTCTTGAAACTTCTCATGTGTTTTCGCCAGCACTTCTTCGAAGACGCCGTCGAGCCGCTGTTCGAGGACGGCGATTCCTTCCCCGGTGATTCCGCCTTTGACGCACACTTTTTCCTGCAGCGTCGGGAGCGTGTACAAGTTTTGCTTCAACAATTCTGCGAAGCCGATGATCATGTCGGTCGCCAGCATCGTCGCCTGTTCTTTCGTGATGGCGGTTTTGGCCGCTGCGGCGTCGATGAAGCGTTGCAGCAAATAGCTGAAAAACGCCGGACCGCAGCTGGAGATGTCGGAAGCGACGCGGGTGATGGCCTCATCGATGTACACCGGCGAGGCGATGCGCCGGAGAAGATCATCGATCGTTTGCCGGCAGTCGGCCGAACAGCGTGATCCGATTGTGATGAGTATGCTGCCGGAGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCGGCTATTAAGCCGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.40,-15.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //