Array 1 164715-164935 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFREF010000005.1 Faecalibacterium sp. Marseille-P9590 NODE_5_length_195910_cov_95.291849, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================ ================== 164715 23 87.0 42 ACA.................... GTATCGTCAGGCTGTGCGTCAACAATCAGTGCGATTGCAATT 164780 23 100.0 43 ....................... TTCCAGAACAGCTGCGACAGTCTTAATCTCTTTCATTGCAATT 164846 23 100.0 44 ....................... CGCGGGAGTGAAATCTCCATTTCAGAACCATGCAAATTGCAATT 164913 23 87.0 0 .................AA...A | ========== ====== ====== ====== ======================= ============================================ ================== 4 23 93.5 43 TATCCCCGCAAGGGGACGGAAAC # Left flank : CGTTCATCAGCGAGTTTTTCCACTGGCTGGAGCAGAGCTTTGCTGTTCTGCACAGCGGCGAGACCTGCCGCTATCTGCCGGTGAACGATTCTGTGCAGGGCAGCGAGCGTCTGACCCCGGCTCTGGGCGTTCTGGAAGAGCTGGACCTGCTCCACTTTGCCCTTCTGGGAGGCTCCAACAGCCGCCTGTACCTCTACGTCAACCAGACCCAGACCCTGGAGCTGGCTGACCGCGGGTTCTACCGCAACCACCTGCCGGAGCGCATTGCCCAGCGCCACACCGATGCTGTGCGGCTGATGAGCTGGCTGTTTACCAGCGGCTTTTCCAGCGAGCAGCTCTGGGACCGCATCGAGGAATACTTTCTCGGCCTGCCCATTCAGGGCTTTGACGCCCCTTCTGCCGAATCGAGGTGATCTTTATGCCTTATCTTTTCTGCTCCATCCGCGCTTCTCCGGTGTATAGTTCTTTTCTTTTGACTCAATGTGTGGTATAGTAAAACT # Right flank : AGCACCTCTGCCACTGGCGTTTGCCAGCAGCGGAGGTGCTTTGCTTTTTCTTATATTCTATTTTACAGGTTGGGAACTGCGCCTGCCGGAATCGTCTTTGTGACAGGCAGCGCCTTGACGCCTTGCGGGACGTTCCGCTTCAAGGGGCGGATCTCATGCAGGTAGGCGGCGATCTTTTGCAGGGTCTCTTTAATGTGCTCTGTATCCAGCGGCAGAACGCGCTCGCTCTGTAAGCCTAGGTCGCTGGCGCTGGCGTGATTGATCTGGTTGCGGTACTGCATCACGCGCTGATAGAGCAGGGCAGCCTGCTCCAGCTGCGGGCGGATGGCAGGGTCGATGACCAGCTGCCCAGAGGCAAGCACCATATCCAGATAGTCGTGCATTTCTGCATCATTTGCTACGCCGAACAGCATATTTCCTTCTGCATCGTCCCGGCTTAGGGTCAGGCGCAGGTCTGTTGTATAGGGATATTCCTTCTGCATCAAAGTCAGGCGGCAGAA # Questionable array : NO Score: 5.54 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.10,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 169056-169679 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFREF010000005.1 Faecalibacterium sp. Marseille-P9590 NODE_5_length_195910_cov_95.291849, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 169056 32 100.0 34 ................................ TTGTAAGCAGTCAGCTTGCCGCTTTCGTTCACGG 169122 32 100.0 34 ................................ CTTCGTCTTTGCCATAAAATCAACTCCTTCTGCG 169188 32 100.0 35 ................................ CTCTGATTTTCGGTAAGTCTTTAATAACCATAATG 169255 32 100.0 34 ................................ CTTGATTAAATGCGGCTTTCGCCCACTTGCACAG 169321 32 100.0 35 ................................ TCCCCGGTGCAGCCCCGGCGGATGGTCGGCAGAAT 169388 32 93.8 33 ...........................GA... ATTTTCATCTCTTCGCCGTTTACAATGTCAATG 169453 32 93.8 33 ......AT........................ ATTGGATTCGCTGGAACTGATCCAGATAATAAA 169518 32 100.0 33 ................................ AAGGTCGGGTCGATGTACAGGCCGTCCGACCGC 169583 32 100.0 33 ................................ AACTGGTTCACGCTGCCGCAGTAATAGGCCGGA 169648 32 87.5 0 ........................G.A.A..A | ========== ====== ====== ====== ================================ =================================== ================== 10 32 97.5 34 ATTGCAGCTTATCCCCGCAAGGGGACGATAAC # Left flank : GGCACGGTGGTCGATCTTGCCTTTCCCGCCATCGACCCCGCCGCCGACGAGGCCGCACTGGACTCCCTTGCCGCGGTATACGCCGACCACATCCTGCACCTTAACCCGGACGCCGTGCTTTGTCAGGGCGAGTGCACCTTTGTGTACCGGGTAGTCCAGCGTCTGGAAGCCGCGGGCATCCCCACGCTGGCCGCCTGCTCCCGCCGCAAGAGTCAGGAGACCACCTACCCGGACGGCAGCACCCTGAAGCGCAGCATTTTTGTGTTTGCCGGGTTCCGGCGATATGGCCCGATGCCCTGAAGTCAACAGTTCGGGGTGCGAACCTCCTTTTCTACCGCCTAGTTTTCCCCAATCTGGCACAGGGTTCGCACCACCAATTTCCAACTTTTTATTCGGAAATATCTTTTATTTTTGCAGTCAATGTGCTATATTTATCTTGTGATTGCAGAACACGCCTTAAAAAACGCAGGAAAAGAGTTTCTTTTTGGGGCAGTTCTGCT # Right flank : ACTCCGCATCAAAAGATGCGGAGTTTTTCTTTTACAAAACTTAACTCTTTGGTTTCCGTGGGCTGTCCCTCTATGAACGGAACGATTGCAGCTGCTGTGATATTTTCTCTGCTGCGGCTTTTGCATAGCGACAAAATGTGTTATAATAAAGCCAATTCCAAGCATCTCTTACAAAATTGACAAACGCGTTTTCCGTTTATTGTGCAATTCTTCCACAACCCGTAAAGGAGATGGTATTTTGAACGTTCTCACCCTGCAGTCCACCTATGGCGGGCTGCTGCACGACACCGGTAAAGCGGTGTACCGTGCCGGTGGGCAGCGCGGCAGCCACAGTGAACAGGGCTACCAGTTTTTGCACGGCGTTTTGCCCGGTGCAGGCTGGGCACCGGCGCTGGACTGTGTGCGCTACCACCACTCCGCCGCGCTGCGCGGTGCAGCAAAGGCGCTGCCAGCCGATTCCCCGGCCTATATCGTTTATCTGGCAGATGATCTTTCTGCCG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGCTTATCCCCGCAAGGGGACGATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 56649-63801 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFREF010000013.1 Faecalibacterium sp. Marseille-P9590 NODE_13_length_73731_cov_99.275281, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================================================================================================================================================================================================== ================== 56649 33 100.0 36 ................................. TGCAAAACGCATACACAGGTGGCAGACCGCTGCCGG 56718 33 100.0 33 ................................. ATCGTCAATTTGACGTCTTGCCGCCTTTTAAAG 56784 33 100.0 35 ................................. CCGGCTATACGAACTACATCGACATTGCAATCAGC 56852 33 100.0 34 ................................. GCAAGCGTCAACTTGCAGGCCCAAATCTTTTATG 56919 33 100.0 35 ................................. AAGCCATTTTTCCACCCCCCGAAACGCCGGAAAAG 56987 33 100.0 36 ................................. ATTCTGGCGTTTGAGGTCATCCGCACCAACTACAAC 57056 33 100.0 35 ................................. GAGACCCTGCTGGTAGGTATGGTCATGCCGGATGC 57124 33 100.0 34 ................................. AAAAAGGCAAGCAGCGTGGCCCCAGCACCGCAGG 57191 33 100.0 34 ................................. ACCAACGAGGGAGGCTACTGGATGGACTCCAAAG 57258 33 100.0 35 ................................. ATCCTTGCAGCCAGCTTTGCCGCCCCGCTCCTGCG 57326 33 100.0 34 ................................. AACGTCGATGTGACCTACTACATCAACCGCAGCG 57393 33 100.0 35 ................................. GTAAGCTGCGAGGTGCGCAGGCTGAGGACGTCGGA 57461 33 100.0 36 ................................. CGCGTTACTTCGGTGGCCCGCAGCCAGCCTTTAACG 57530 33 100.0 34 ................................. TGGATGCCCTGCACAAGGAGACGGACGAACTCAA 57597 33 100.0 35 ................................. CTGCTTTCCAGCGGCGAAATCGCGCGTGGAAAGGT 57665 33 100.0 34 ................................. TGGTAGGCTGCCGTAAGGTGAATGACCTCACTGT 57732 33 100.0 34 ................................. TGCGCCGCTGCTGGCTCATCGCTGACGCGGTGTC 57799 33 100.0 35 ................................. CTTTGCCTTGCGGAGCTCCTCAAGAAACTCAGGGA 57867 33 100.0 35 ................................. TGAATCAGCCTTGCCATAATAGCGGCCCTGTACGT 57935 33 100.0 34 ................................. AAACTCATCTTCGGCAGCAGCAACGGACGCGGCA 58002 33 100.0 34 ................................. TTCCCGCAAGTGAATGGAGGTCGTAAACAATGAG 58069 33 100.0 33 ................................. CGTCCGGTCACGAGTATTATCACTACTCTGTGG 58135 33 100.0 37 ................................. TGGGCAGACAACCATGTTTTGATGATGATGGGAACTG 58205 33 100.0 33 ................................. GGCGCAAAGAAGTAATAGATGTCCATGTAACAG 58271 33 100.0 34 ................................. CGAAATCCAGAGAACTCTCGCAGTAGACAACGAA 58338 33 100.0 33 ................................. ATGATGTGCTGGATGATGTAGGGCTTGCCGATA 58404 33 100.0 34 ................................. TGATGCCTCCTATGTTATGTAATGTAAAATTTAA 58471 33 100.0 36 ................................. GCGTCCTATGCGGTGGAATATGACTGGTACATCAAG 58540 33 100.0 35 ................................. TCCATGAGCAGGTGGAGAAGCGCATTCTCACGGTC 58608 33 100.0 34 ................................. AAGAAGATCGAGGTGACGGAAACCGCCACCGCAG 58675 33 100.0 33 ................................. GGTCGAAAGGGTTGATTTTTAGTCTACAACCTA 58741 33 100.0 34 ................................. ATGATTTTCCGCTTTTGTGATTTTTGCTCAATTT 58808 33 100.0 35 ................................. AAGTTGTTCCTTGGCTGTCTCGGAAACGGCGTAAC 58876 33 100.0 34 ................................. AAGATGGTGTCTATGCCACTTACAGCTCGCATAA 58943 33 100.0 35 ................................. CGTGACTACATACTGCGTTGCATTTAGACCAAGCT 59011 33 100.0 34 ................................. TCAAGGAGGGACTGCACCCAAATGACGCGGCAGC 59078 33 100.0 35 ................................. ACCTATGGCTACTCCATGTGACCAAGCATTGCAAA 59146 33 100.0 35 ................................. GTGTACCCGGTAGCAAAGGCCACCAGGCCGTTGGG 59214 33 100.0 34 ................................. CTCAGCGGCACTCATCTCCCCATACAACCCGGTG 59281 33 100.0 36 ................................. AGATACCAGGTGATGTGCTCAGAGGCGTCAAAGCTC 59350 33 100.0 35 ................................. TCCCCGGCGGGCTGCTGCACCAGCCGGGGAAGGTC 59418 33 100.0 33 ................................. ATGTCGGCCATTGCCCGTTGATAACTTGTGTTG 59484 33 100.0 36 ................................. ATGATCGACCCGTCGGGGGTCGTCCATGTTACGGCG 59553 33 100.0 35 ................................. CAGCCACCGCCCGCCCCGGACGATACCCCGGAAGA 59621 33 100.0 34 ................................. TACTTGTCTTTCTTTCATTCCTGCCCATCCTCCG 59688 33 100.0 35 ................................. ATCTCCGGGTCGTGAGTGATAGCCATAATCTTGAG 59756 33 100.0 34 ................................. GTGATGGACCGATGCTCTTTTGTTGCTAGAACAC 59823 33 100.0 34 ................................. AATTTCACGGATTATACCACTATATATTGTGGTC 59890 33 100.0 34 ................................. ACTGGCGTATCAGCATAGCCGCGGCTGCGGTCAG 59957 33 100.0 35 ................................. GGTTCCCTGGTGGAGCTCTACATGGCGGATGCAAA 60025 33 100.0 34 ................................. CATGACGGGAGAGCGGGAGGCAGGCACCACTCCG 60092 33 100.0 33 ................................. TACAATCTGTACTCTGTCTTTCTTGGTCATGGT 60158 33 100.0 34 ................................. CAAGCTGTCTGTTATCCTCTATGGTGAGCCTGGT 60225 33 100.0 36 ................................. ATGTGATCCGCTTTCATGCGCTCGTTCCAGAACGAA 60294 33 100.0 34 ................................. GCAATGCTCTGGCCGGCATCAAGGCCATCGGCCA 60361 33 100.0 36 ................................. TTATTCTGAGAGCAAAGCGGGGTACAGGGGCAAGGC 60430 33 100.0 35 ................................. TGTCCGGCACGGCAATCATCTGCCCTGTTGTGGTA 60498 33 100.0 34 ................................. CTCAGAGAGACACCAAAAAGAGATAAAACATCCA 60565 33 100.0 35 ................................. AAGCTGGTCGCAAGGCTCAAGCGACAGCGCAAGTG 60633 33 100.0 35 ................................. CGGTATCGCTGCACGTTTGCCGCTGGTAAGCTGTA 60701 33 100.0 35 ................................. GTAAAGGTTAGGCACATTATTGCGCGCGTGCGCGC 60769 33 100.0 35 ................................. CGCTGAGTTGTAGCTCATGGCTGCTTGCTGCTCGA 60837 33 100.0 34 ................................. CGCCAGCGTCTGCGGTGCCTCGGTAAAGTCTTGG 60904 33 100.0 34 ................................. AAGATGGTCGCCCACATCTCCAACGAGGGGAAAA 60971 33 100.0 34 ................................. ACGTCCTTCCAGACGGTTTGCCGCCGCCTATGTT 61038 33 100.0 35 ................................. GATGGAGATCGTGGAGAAGCTGCTCAAATCCAGGT 61106 33 100.0 34 ................................. CCAGAGCGTGCGAGACCTCATCATCCGGCAGATG 61173 33 100.0 34 ................................. TTGAACCGCCGGTAGTTTTTCAGCAGCATCTTCG 61240 33 100.0 34 ................................. GCAGAACCTACACCATCATCCGAGGCCGCATTTT 61307 33 100.0 35 ................................. CGTTGGGGCCAAGCATAGACTCAAGCGCATTGACA 61375 33 100.0 34 ................................. CGGCTCTCAGATTGGAGATAATACGATGGTGATA 61442 33 100.0 34 ................................. CGAATGGGAAGTACCGCGATAGATTAAATGGCCG 61509 33 100.0 34 ................................. TGCTCAATCATGGTCTTCGCTCCTCTCATACGGA 61576 33 100.0 35 ................................. CGAGCAGGGCGTTCTGGACGGTGTTGCTGCTCCGG 61644 33 100.0 34 ................................. ATGTACCCTTGGCTGCGCTGATGGTTGTACCAGC 61711 33 100.0 34 ................................. ATGTACCCGTTAGCAAAGGCCACCAGGCCGTTGG 61778 33 100.0 33 ................................. CAGTCCGTTGGCGATAGCTTCCGCCAGAATGGC 61844 33 100.0 34 ................................. TGGCCCGGGCGCAGCTGCTTTGACCTCTTAAAAA 61911 33 100.0 33 ................................. ACGGGGCATACCCGCGAAATAGGTATCAGTCCG 61977 33 100.0 35 ................................. TGCCTCTGCGGCAGATGCTCGCGCAAGCTGCGCAG 62045 33 100.0 35 ................................. TTGGCAGGAGAGTACGGAGACAACACGGCACGACC 62113 33 100.0 34 ................................. TTGGACGCTCTGAGGCGCCTTTCCAGATGTTTAT 62180 33 100.0 33 ................................. GTTCAGGCCCCAACCTGCTATCGTTGGTATCAG 62246 33 100.0 35 ................................. TGCCCATGCTTCTTGGTAGCCGAATGCCTGTTCGT 62314 33 100.0 34 ................................. TTTCGACTCCACATTTTTTCGAGGCCCTGTTGGT 62381 33 100.0 35 ................................. TTTGTCTCCTCGTAATCTTCCAGCACGACGGCAGC 62449 33 100.0 35 ................................. ATCTTCATCCCGGCCAGCCTCATACAAACAGGTAC 62517 33 100.0 33 ................................. ACTTCGGCAAGGATGTCCTCGCCGTCCACATAG 62583 33 100.0 34 ................................. GCTGTGCCTGTCCTTTGGGGCGGCTATTGCGCAT 62650 33 100.0 36 ................................. AAGCCGGACTTGGTCGCGGGCCTCGCTCAGACTCAG 62719 33 100.0 33 ................................. TGTACGGTGGTCGTGGTCAGGGGGAAGGTCTGC 62785 33 100.0 34 ................................. CCGCAACAGATAATCCGGGTCATTGTGGGAGACG 62852 33 100.0 35 ................................. GACGAAAAAACAGGAGACTTCACAGAGGCAAAGGA 62920 33 100.0 33 ................................. AGAGAACCAAAGAAACCGACGAAGACTGGGAAG 62986 33 100.0 34 ................................. CCTGCTGGAAACAGGTCTGCCAAGCAGCCAGCCG 63053 33 100.0 35 ................................. CTGATTTTGTAAACTCATAAGTTGTGTTGGTTTGA 63121 33 100.0 35 ................................. TTATGGTGGAACCGTTAATATTACGTTTTGCTGAG 63189 33 100.0 34 ................................. TTGAAGGTCAGCTTTCCATGCGTGGCATTCGGCC 63256 33 100.0 35 ................................. ATTCTGGGGTGGTTGTCCTTGATGGAGGTCAGCAC 63324 33 100.0 35 ................................. ATGTGCGATGGTTGGCTGCATCCTCGCAAGCACGG 63392 33 100.0 34 ................................. AAAACGGACGCTCTCTGATGGCCGCCGATAATGG 63459 33 84.8 211 ......T.....A.........CA.G....... CGACACAAAAATATGGTAAACTCTTATTAAGTTATTGCCATGCGCTCTCTAAGGAACCGAGTATTTTGACCTACAATTCCGTCTCTTAAAGACGTTGTTTGAAATCAGTTTGTGTTCCCCGGTGCATTCTTCGACTTGAAGTCGCTCCTATTTGAGGGGTGTGGATAGAATAACATAATAATCATATCGCGGTTCTCAAAGGCGTAACCAA 63703 33 81.8 33 ....T....T..A.C....A...A......... TGTCACAACCACGCCGGTCTTTTCAGCATCAAG 63769 33 78.8 0 ..T.......C...AA....TAC.......... | ========== ====== ====== ====== ================================= =================================================================================================================================================================================================================== ================== 104 33 99.5 36 GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Left flank : CATTTTTCTGGAAGTGAGGGATGTGTATGCTGGTCCTCATCACCTACGACGTCAACACCGAAACTCCTGCCGGGCGCAAACGTCTGCGCAAAGTCGCCAAGCGCTGTGTGGACCACGGCCAGCGGGTGCAGAACTCCGTGTTCGAGTGTCTGCTGGATGCCGCGCAGTATGCCGTTCTCAAGGCGGAGCTGATGTCTCTCATCGACCCTGCGCTGGACAGTCTGCGCTTCTACCAGCTGGGCAACAACTATAAGAACAAGGTGGAGCATATCGGCGTTCATCCGCCCTTCGAGCAGGACGGCCTGCTGTTGTTCTGAGTTTCCCGCCCCGGTGCGAAGGGCGAGTTCTCAGCATTTTTCCGGCACCTTCGCACCGGATTTTTGTGTCATTTTGCATGATTTGGATAGTTCTTTGACCCGTTGTAAATCAAGGCTCTTCTAAATTCGTGCAGAATGTTGTATAATTTGTTTGAAAATAGAGATTTTGTCTCTGTTTTTGCT # Right flank : TCAGTTTCCACCTCGAATCGGGCATCGCCACAATTTTTCCAAAAAGGAGTTTTCCATGCATACCGTTCCCCTTTCCCATCAGCTCGTCACCATCCAGGACGACTTTGACCTCGACAAGATCATCGAAAGCGGTCAGTGCTTCCGGCCACAGAAACTGGCCGACGGGCGCTACCGTTTTCTTTCCGGCGGCGCACTCCTTTATCTGACTCCGCTGGGCGCTGGGCAATACGACGCTGCATGGTATGGCTCAGATTGGGAGTGCTGGGCCAACTACTTTGATTTGGGCCGGAACTATGCCGCGCTGCGGTGCAGCTTGGCGGGACAGAGCAACTATCTGGACAAATCGCTCGATTTCGGGCAGGGCATCCGAATCCTGCATCAGGATCCATGGGAAATGCTCATCACCTTTCTTATCTCCCAGCGCAAAAGCATTCCGGCCATCCGCACCGCCGTAGAACGCCTTGCCCGGTGCTGCGGCGAACCGCTCAGTGCCGAAGGCG # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //